Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.51□□□□□ -2.17
SSSCA1O60232 OR1S1-201ENST00000624470 978 ntBASIC1.51□□□□□ -2.17
SSSCA1O60232 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC1.51□□□□□ -2.17
SSSCA1O60232 AC243829.7-201ENST00000633081 225 ntBASIC1.51□□□□□ -2.17
SSSCA1O60232 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.51□□□□□ -2.17
SSSCA1O60232 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC1.51□□□□□ -2.17
SSSCA1O60232 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
SSSCA1O60232 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
SSSCA1O60232 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
SSSCA1O60232 AL136360.1-201ENST00000503377 1900 ntBASIC1.5□□□□□ -2.17
SSSCA1O60232 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
SSSCA1O60232 RNA5SP258-201ENST00000362750 119 ntBASIC1.5□□□□□ -2.17
SSSCA1O60232 XGY1-201ENST00000381172 446 ntBASIC1.5□□□□□ -2.17
SSSCA1O60232 U3.20-201ENST00000390909 217 ntBASIC1.5□□□□□ -2.17
SSSCA1O60232 MTATP6P31-201ENST00000406985 692 ntBASIC1.5□□□□□ -2.17
SSSCA1O60232 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.5□□□□□ -2.17
SSSCA1O60232 RN7SKP32-201ENST00000410167 303 ntBASIC1.5□□□□□ -2.17
SSSCA1O60232 RNA5SP56-201ENST00000410277 118 ntBASIC1.5□□□□□ -2.17
SSSCA1O60232 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC1.5□□□□□ -2.17
SSSCA1O60232 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.5□□□□□ -2.17
SSSCA1O60232 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC1.5□□□□□ -2.17
SSSCA1O60232 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC1.5□□□□□ -2.17
SSSCA1O60232 RNF19BPX-201ENST00000426224 625 ntBASIC1.5□□□□□ -2.17
SSSCA1O60232 AC079780.1-201ENST00000428259 207 ntBASIC1.5□□□□□ -2.17
SSSCA1O60232 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.5□□□□□ -2.17
SSSCA1O60232 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.5□□□□□ -2.17
SSSCA1O60232 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.5□□□□□ -2.17
SSSCA1O60232 AC004022.1-201ENST00000447766 1066 ntBASIC1.5□□□□□ -2.17
SSSCA1O60232 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.5□□□□□ -2.17
SSSCA1O60232 CABYRP1-201ENST00000465493 1045 ntBASIC1.5□□□□□ -2.17
SSSCA1O60232 RPL23AP41-201ENST00000484754 458 ntBASIC1.5□□□□□ -2.17
SSSCA1O60232 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.5□□□□□ -2.17
SSSCA1O60232 HMGB3P17-201ENST00000504195 649 ntBASIC1.5□□□□□ -2.17
SSSCA1O60232 AC114781.4-201ENST00000513707 639 ntBASIC1.5□□□□□ -2.17
SSSCA1O60232 RNU7-193P-201ENST00000516723 65 ntBASIC1.5□□□□□ -2.17
SSSCA1O60232 SNORA31.18-201ENST00000517043 134 ntBASIC1.5□□□□□ -2.17
SSSCA1O60232 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.5□□□□□ -2.17
SSSCA1O60232 OR4V1P-201ENST00000525394 1140 ntBASIC1.5□□□□□ -2.17
SSSCA1O60232 AP003122.3-201ENST00000526316 255 ntBASIC1.5□□□□□ -2.17
SSSCA1O60232 AC139103.1-201ENST00000534696 1030 ntBASIC1.5□□□□□ -2.17
SSSCA1O60232 AP005205.1-201ENST00000563503 508 ntBASIC1.5□□□□□ -2.17
SSSCA1O60232 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.5□□□□□ -2.17
SSSCA1O60232 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.5□□□□□ -2.17
SSSCA1O60232 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC1.5□□□□□ -2.17
SSSCA1O60232 MFSD8-245ENST00000641743 948 ntBASIC1.5□□□□□ -2.17
SSSCA1O60232 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC1.5□□□□□ -2.17
SSSCA1O60232 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC1.5□□□□□ -2.17
SSSCA1O60232 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
SSSCA1O60232 NSRP1P1-201ENST00000444067 1693 ntBASIC1.49□□□□□ -2.17
SSSCA1O60232 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
SSSCA1O60232 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
SSSCA1O60232 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC1.49□□□□□ -2.17
SSSCA1O60232 BTF3P9-201ENST00000418784 283 ntBASIC1.49□□□□□ -2.17
SSSCA1O60232 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.49□□□□□ -2.17
SSSCA1O60232 AL831737.1-201ENST00000441288 271 ntBASIC1.49□□□□□ -2.17
SSSCA1O60232 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.49□□□□□ -2.17
SSSCA1O60232 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.49□□□□□ -2.17
SSSCA1O60232 RPL31P53-201ENST00000457065 348 ntBASIC1.49□□□□□ -2.17
SSSCA1O60232 AC104689.1-201ENST00000473356 768 ntBASIC1.49□□□□□ -2.17
SSSCA1O60232 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC1.49□□□□□ -2.17
SSSCA1O60232 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC1.49□□□□□ -2.17
SSSCA1O60232 AC021146.7-201ENST00000509604 775 ntBASIC1.49□□□□□ -2.17
SSSCA1O60232 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.49□□□□□ -2.17
SSSCA1O60232 PRELID3BP4-201ENST00000515476 571 ntBASIC1.49□□□□□ -2.17
SSSCA1O60232 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.49□□□□□ -2.17
SSSCA1O60232 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC1.49□□□□□ -2.17
SSSCA1O60232 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.49□□□□□ -2.17
SSSCA1O60232 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.49□□□□□ -2.17
SSSCA1O60232 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.49□□□□□ -2.17
SSSCA1O60232 AC090888.1-201ENST00000561335 1141 ntBASIC1.49□□□□□ -2.17
SSSCA1O60232 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.49□□□□□ -2.17
SSSCA1O60232 MIR3618-201ENST00000580330 88 ntBASIC1.49□□□□□ -2.17
SSSCA1O60232 AC017100.2-201ENST00000584628 355 ntBASIC1.49□□□□□ -2.17
SSSCA1O60232 AP004372.1-201ENST00000604842 844 ntBASIC1.49□□□□□ -2.17
SSSCA1O60232 AC103710.1-201ENST00000610003 901 ntBASIC1.49□□□□□ -2.17
SSSCA1O60232 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC1.49□□□□□ -2.17
SSSCA1O60232 AC091932.3-201ENST00000624223 323 ntBASIC1.49□□□□□ -2.17
SSSCA1O60232 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.49□□□□□ -2.17
SSSCA1O60232 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
SSSCA1O60232 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
SSSCA1O60232 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.49□□□□□ -2.17
SSSCA1O60232 CR848007.1-201ENST00000442354 1699 ntBASIC1.48□□□□□ -2.17
SSSCA1O60232 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
SSSCA1O60232 AC131280.1-202ENST00000624067 4211 ntBASIC1.48□□□□□ -2.17
SSSCA1O60232 MIR208A-201ENST00000362287 71 ntBASIC1.48□□□□□ -2.17
SSSCA1O60232 RNU5D-1-201ENST00000363299 116 ntBASIC1.48□□□□□ -2.17
SSSCA1O60232 SNORA68.1-201ENST00000364537 132 ntBASIC1.48□□□□□ -2.17
SSSCA1O60232 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC1.48□□□□□ -2.17
SSSCA1O60232 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
SSSCA1O60232 SNORA67.3-201ENST00000384366 140 ntBASIC1.48□□□□□ -2.17
SSSCA1O60232 SNORA64-201ENST00000384674 134 ntBASIC1.48□□□□□ -2.17
SSSCA1O60232 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.48□□□□□ -2.17
SSSCA1O60232 RPL23AP83-201ENST00000434984 473 ntBASIC1.48□□□□□ -2.17
SSSCA1O60232 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC1.48□□□□□ -2.17
SSSCA1O60232 RPL35AP22-201ENST00000436855 335 ntBASIC1.48□□□□□ -2.17
SSSCA1O60232 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC1.48□□□□□ -2.17
SSSCA1O60232 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.48□□□□□ -2.17
SSSCA1O60232 TRGVB-201ENST00000453257 471 ntBASIC1.48□□□□□ -2.17
SSSCA1O60232 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
SSSCA1O60232 RPL21P99-201ENST00000480369 423 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms