Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PRDM9Q9NQV7 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PRDM9Q9NQV7 MIR130B-202ENST00000385018 82 ntBASIC5.72□□□□□ -1.49
PRDM9Q9NQV7 SNORA77.2-201ENST00000408571 112 ntBASIC5.72□□□□□ -1.49
PRDM9Q9NQV7 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.72□□□□□ -1.49
PRDM9Q9NQV7 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.72□□□□□ -1.49
PRDM9Q9NQV7 LAMTOR3P1-201ENST00000428620 370 ntBASIC5.72□□□□□ -1.49
PRDM9Q9NQV7 RPL7L1P9-201ENST00000431298 745 ntBASIC5.72□□□□□ -1.49
PRDM9Q9NQV7 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.72□□□□□ -1.49
PRDM9Q9NQV7 AC016027.4-201ENST00000450866 277 ntBASIC5.72□□□□□ -1.49
PRDM9Q9NQV7 BX276092.4-201ENST00000452056 248 ntBASIC5.72□□□□□ -1.49
PRDM9Q9NQV7 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.72□□□□□ -1.49
PRDM9Q9NQV7 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.72□□□□□ -1.49
PRDM9Q9NQV7 AC083795.1-201ENST00000491760 320 ntBASIC5.72□□□□□ -1.49
PRDM9Q9NQV7 AC091959.1-201ENST00000495857 238 ntBASIC5.72□□□□□ -1.49
PRDM9Q9NQV7 LSM3P4-201ENST00000502948 309 ntBASIC5.72□□□□□ -1.49
PRDM9Q9NQV7 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC5.72□□□□□ -1.49
PRDM9Q9NQV7 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.72□□□□□ -1.49
PRDM9Q9NQV7 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PRDM9Q9NQV7 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC5.72□□□□□ -1.49
PRDM9Q9NQV7 AL157871.3-201ENST00000557231 293 ntBASIC5.72□□□□□ -1.49
PRDM9Q9NQV7 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.72□□□□□ -1.49
PRDM9Q9NQV7 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PRDM9Q9NQV7 MIR1273C-201ENST00000578669 77 ntBASIC5.72□□□□□ -1.49
PRDM9Q9NQV7 MIR4423-201ENST00000580922 80 ntBASIC5.72□□□□□ -1.49
PRDM9Q9NQV7 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.72□□□□□ -1.49
PRDM9Q9NQV7 AC006115.2-201ENST00000596823 202 ntBASIC5.72□□□□□ -1.49
PRDM9Q9NQV7 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.72□□□□□ -1.49
PRDM9Q9NQV7 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PRDM9Q9NQV7 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
PRDM9Q9NQV7 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.72□□□□□ -1.49
PRDM9Q9NQV7 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.72□□□□□ -1.49
PRDM9Q9NQV7 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.72□□□□□ -1.49
PRDM9Q9NQV7 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
PRDM9Q9NQV7 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
PRDM9Q9NQV7 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.72□□□□□ -1.49
PRDM9Q9NQV7 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PRDM9Q9NQV7 PABPC1P6-201ENST00000445594 1829 ntBASIC5.71□□□□□ -1.49
PRDM9Q9NQV7 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
PRDM9Q9NQV7 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
PRDM9Q9NQV7 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
PRDM9Q9NQV7 THAP12P5-201ENST00000405864 2275 ntBASIC5.71□□□□□ -1.5
PRDM9Q9NQV7 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
PRDM9Q9NQV7 RNU6-37P-201ENST00000362692 107 ntBASIC5.71□□□□□ -1.5
PRDM9Q9NQV7 RNU6-11P-201ENST00000364234 107 ntBASIC5.71□□□□□ -1.5
PRDM9Q9NQV7 RNU6-7-201ENST00000364784 107 ntBASIC5.71□□□□□ -1.5
PRDM9Q9NQV7 Y_RNA.286-201ENST00000364813 102 ntBASIC5.71□□□□□ -1.5
PRDM9Q9NQV7 RNU6-8-201ENST00000365467 107 ntBASIC5.71□□□□□ -1.5
PRDM9Q9NQV7 RNU6-25P-201ENST00000383873 107 ntBASIC5.71□□□□□ -1.5
PRDM9Q9NQV7 RNU6-1-201ENST00000383898 107 ntBASIC5.71□□□□□ -1.5
PRDM9Q9NQV7 RNU6-36P-201ENST00000384172 107 ntBASIC5.71□□□□□ -1.5
PRDM9Q9NQV7 RNU6-4P-201ENST00000384205 107 ntBASIC5.71□□□□□ -1.5
PRDM9Q9NQV7 RNU6-5P-201ENST00000384238 107 ntBASIC5.71□□□□□ -1.5
PRDM9Q9NQV7 RNU6-3P-201ENST00000384314 107 ntBASIC5.71□□□□□ -1.5
PRDM9Q9NQV7 RNU6-16P-201ENST00000384385 107 ntBASIC5.71□□□□□ -1.5
PRDM9Q9NQV7 RNU6-15P-201ENST00000384534 107 ntBASIC5.71□□□□□ -1.5
PRDM9Q9NQV7 RNU6-2-201ENST00000384627 107 ntBASIC5.71□□□□□ -1.5
PRDM9Q9NQV7 RNU6-29P-201ENST00000384637 107 ntBASIC5.71□□□□□ -1.5
PRDM9Q9NQV7 RNU6-21P-201ENST00000384710 107 ntBASIC5.71□□□□□ -1.5
PRDM9Q9NQV7 RNU6-9-201ENST00000384776 107 ntBASIC5.71□□□□□ -1.5
PRDM9Q9NQV7 MIR301A-201ENST00000385261 86 ntBASIC5.71□□□□□ -1.5
PRDM9Q9NQV7 RNU2-43P-201ENST00000410306 190 ntBASIC5.71□□□□□ -1.5
PRDM9Q9NQV7 Y_RNA.597-201ENST00000410463 100 ntBASIC5.71□□□□□ -1.5
PRDM9Q9NQV7 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC5.71□□□□□ -1.5
PRDM9Q9NQV7 AC079809.1-201ENST00000415468 276 ntBASIC5.71□□□□□ -1.5
PRDM9Q9NQV7 AL133482.1-201ENST00000415988 498 ntBASIC5.71□□□□□ -1.5
PRDM9Q9NQV7 AC010154.1-201ENST00000425857 269 ntBASIC5.71□□□□□ -1.5
PRDM9Q9NQV7 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.71□□□□□ -1.5
PRDM9Q9NQV7 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.71□□□□□ -1.5
PRDM9Q9NQV7 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.71□□□□□ -1.5
PRDM9Q9NQV7 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC5.71□□□□□ -1.5
PRDM9Q9NQV7 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.71□□□□□ -1.5
PRDM9Q9NQV7 RPS29P27-201ENST00000463711 170 ntBASIC5.71□□□□□ -1.5
PRDM9Q9NQV7 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.71□□□□□ -1.5
PRDM9Q9NQV7 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.71□□□□□ -1.5
PRDM9Q9NQV7 YWHAEP4-201ENST00000505390 198 ntBASIC5.71□□□□□ -1.5
PRDM9Q9NQV7 APOOP4-201ENST00000513530 597 ntBASIC5.71□□□□□ -1.5
PRDM9Q9NQV7 HIGD1AP3-201ENST00000515857 278 ntBASIC5.71□□□□□ -1.5
PRDM9Q9NQV7 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.71□□□□□ -1.5
PRDM9Q9NQV7 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.71□□□□□ -1.5
PRDM9Q9NQV7 CYCSP38-201ENST00000559840 322 ntBASIC5.71□□□□□ -1.5
PRDM9Q9NQV7 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.71□□□□□ -1.5
PRDM9Q9NQV7 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.71□□□□□ -1.5
PRDM9Q9NQV7 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.71□□□□□ -1.5
PRDM9Q9NQV7 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.71□□□□□ -1.5
PRDM9Q9NQV7 RNU6-6P-201ENST00000606623 107 ntBASIC5.71□□□□□ -1.5
PRDM9Q9NQV7 AC245014.3-201ENST00000618589 347 ntBASIC5.71□□□□□ -1.5
PRDM9Q9NQV7 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PRDM9Q9NQV7 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.71□□□□□ -1.5
PRDM9Q9NQV7 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PRDM9Q9NQV7 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PRDM9Q9NQV7 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
PRDM9Q9NQV7 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.71□□□□□ -1.5
PRDM9Q9NQV7 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.71□□□□□ -1.5
PRDM9Q9NQV7 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
PRDM9Q9NQV7 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.7□□□□□ -1.5
PRDM9Q9NQV7 RAD17P1-201ENST00000418130 2042 ntBASIC5.7□□□□□ -1.5
PRDM9Q9NQV7 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
PRDM9Q9NQV7 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PRDM9Q9NQV7 AC009229.4-201ENST00000623854 1947 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms