Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.07□□□□□ -1.76
AMBRA1Q9C0C7 ZNF33CP-201ENST00000432492 2030 ntBASIC4.07□□□□□ -1.76
AMBRA1Q9C0C7 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
AMBRA1Q9C0C7 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
AMBRA1Q9C0C7 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
AMBRA1Q9C0C7 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
AMBRA1Q9C0C7 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
AMBRA1Q9C0C7 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
AMBRA1Q9C0C7 AC027287.1-201ENST00000553115 1453 ntBASIC4.06□□□□□ -1.76
AMBRA1Q9C0C7 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
AMBRA1Q9C0C7 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
AMBRA1Q9C0C7 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
AMBRA1Q9C0C7 AC018555.1-201ENST00000567548 1980 ntBASIC4.06□□□□□ -1.76
AMBRA1Q9C0C7 AC009951.1-201ENST00000623674 2614 ntBASIC4.06□□□□□ -1.76
AMBRA1Q9C0C7 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
AMBRA1Q9C0C7 RNU6-989P-201ENST00000362756 107 ntBASIC4.06□□□□□ -1.76
AMBRA1Q9C0C7 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.06□□□□□ -1.76
AMBRA1Q9C0C7 RNU11-4P-201ENST00000391149 133 ntBASIC4.06□□□□□ -1.76
AMBRA1Q9C0C7 AL591416.1-201ENST00000404015 867 ntBASIC4.06□□□□□ -1.76
AMBRA1Q9C0C7 RNU6-1068P-201ENST00000410958 103 ntBASIC4.06□□□□□ -1.76
AMBRA1Q9C0C7 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.06□□□□□ -1.76
AMBRA1Q9C0C7 OR1AA1P-201ENST00000419597 916 ntBASIC4.06□□□□□ -1.76
AMBRA1Q9C0C7 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.06□□□□□ -1.76
AMBRA1Q9C0C7 AC005517.2-201ENST00000424673 553 ntBASIC4.06□□□□□ -1.76
AMBRA1Q9C0C7 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.06□□□□□ -1.76
AMBRA1Q9C0C7 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.06□□□□□ -1.76
AMBRA1Q9C0C7 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.06□□□□□ -1.76
AMBRA1Q9C0C7 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.06□□□□□ -1.76
AMBRA1Q9C0C7 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.06□□□□□ -1.76
AMBRA1Q9C0C7 DDX3P2-201ENST00000446138 111 ntBASIC4.06□□□□□ -1.76
AMBRA1Q9C0C7 HMGB3P22-202ENST00000451823 572 ntBASIC4.06□□□□□ -1.76
AMBRA1Q9C0C7 AC092001.1-201ENST00000453012 261 ntBASIC4.06□□□□□ -1.76
AMBRA1Q9C0C7 AL356010.1-201ENST00000456364 102 ntBASIC4.06□□□□□ -1.76
AMBRA1Q9C0C7 HMGB1P25-201ENST00000468402 607 ntBASIC4.06□□□□□ -1.76
AMBRA1Q9C0C7 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC4.06□□□□□ -1.76
AMBRA1Q9C0C7 MTCO2P30-201ENST00000503662 364 ntBASIC4.06□□□□□ -1.76
AMBRA1Q9C0C7 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.06□□□□□ -1.76
AMBRA1Q9C0C7 TMEM248P1-201ENST00000510579 951 ntBASIC4.06□□□□□ -1.76
AMBRA1Q9C0C7 AC026402.1-201ENST00000513642 170 ntBASIC4.06□□□□□ -1.76
AMBRA1Q9C0C7 RN7SKP21-201ENST00000516503 220 ntBASIC4.06□□□□□ -1.76
AMBRA1Q9C0C7 RN7SKP116-201ENST00000516902 319 ntBASIC4.06□□□□□ -1.76
AMBRA1Q9C0C7 RNU6-798P-201ENST00000516912 103 ntBASIC4.06□□□□□ -1.76
AMBRA1Q9C0C7 MIR2116-201ENST00000517221 80 ntBASIC4.06□□□□□ -1.76
AMBRA1Q9C0C7 CBX3P7-201ENST00000532876 502 ntBASIC4.06□□□□□ -1.76
AMBRA1Q9C0C7 AL133271.1-201ENST00000538229 291 ntBASIC4.06□□□□□ -1.76
AMBRA1Q9C0C7 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.06□□□□□ -1.76
AMBRA1Q9C0C7 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC4.06□□□□□ -1.76
AMBRA1Q9C0C7 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.06□□□□□ -1.76
AMBRA1Q9C0C7 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.06□□□□□ -1.76
AMBRA1Q9C0C7 MIR4715-201ENST00000584117 79 ntBASIC4.06□□□□□ -1.76
AMBRA1Q9C0C7 AL356218.2-201ENST00000605264 187 ntBASIC4.06□□□□□ -1.76
AMBRA1Q9C0C7 MIR6716-201ENST00000613413 80 ntBASIC4.06□□□□□ -1.76
AMBRA1Q9C0C7 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.06□□□□□ -1.76
AMBRA1Q9C0C7 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
AMBRA1Q9C0C7 OR56B2P-202ENST00000641377 2453 ntBASIC4.06□□□□□ -1.76
AMBRA1Q9C0C7 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.06□□□□□ -1.76
AMBRA1Q9C0C7 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
AMBRA1Q9C0C7 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
AMBRA1Q9C0C7 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.05□□□□□ -1.76
AMBRA1Q9C0C7 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.05□□□□□ -1.76
AMBRA1Q9C0C7 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.05□□□□□ -1.76
AMBRA1Q9C0C7 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.05□□□□□ -1.76
AMBRA1Q9C0C7 RNA5SP513-201ENST00000364648 118 ntBASIC4.05□□□□□ -1.76
AMBRA1Q9C0C7 RNU1-64P-201ENST00000365443 163 ntBASIC4.05□□□□□ -1.76
AMBRA1Q9C0C7 Y_RNA.493-201ENST00000384422 102 ntBASIC4.05□□□□□ -1.76
AMBRA1Q9C0C7 SNORA70E-201ENST00000384492 135 ntBASIC4.05□□□□□ -1.76
AMBRA1Q9C0C7 RNU6-606P-201ENST00000384721 111 ntBASIC4.05□□□□□ -1.76
AMBRA1Q9C0C7 MIR129-1-201ENST00000384972 72 ntBASIC4.05□□□□□ -1.76
AMBRA1Q9C0C7 RNU6-821P-201ENST00000390995 107 ntBASIC4.05□□□□□ -1.76
AMBRA1Q9C0C7 SNORD66.1-201ENST00000391230 76 ntBASIC4.05□□□□□ -1.76
AMBRA1Q9C0C7 RNA5SP56-201ENST00000410277 118 ntBASIC4.05□□□□□ -1.76
AMBRA1Q9C0C7 RNU6-373P-201ENST00000411247 98 ntBASIC4.05□□□□□ -1.76
AMBRA1Q9C0C7 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.05□□□□□ -1.76
AMBRA1Q9C0C7 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.05□□□□□ -1.76
AMBRA1Q9C0C7 AMD1P1-201ENST00000457220 922 ntBASIC4.05□□□□□ -1.76
AMBRA1Q9C0C7 RNU7-63P-201ENST00000459054 62 ntBASIC4.05□□□□□ -1.76
AMBRA1Q9C0C7 RPL39P36-201ENST00000490784 156 ntBASIC4.05□□□□□ -1.76
AMBRA1Q9C0C7 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
AMBRA1Q9C0C7 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.05□□□□□ -1.76
AMBRA1Q9C0C7 HSPD1P15-201ENST00000505573 1122 ntBASIC4.05□□□□□ -1.76
AMBRA1Q9C0C7 PCBP2P3-201ENST00000509726 843 ntBASIC4.05□□□□□ -1.76
AMBRA1Q9C0C7 AC010486.1-201ENST00000511793 424 ntBASIC4.05□□□□□ -1.76
AMBRA1Q9C0C7 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.05□□□□□ -1.76
AMBRA1Q9C0C7 RNU2-10P-201ENST00000516375 211 ntBASIC4.05□□□□□ -1.76
AMBRA1Q9C0C7 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.05□□□□□ -1.76
AMBRA1Q9C0C7 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC4.05□□□□□ -1.76
AMBRA1Q9C0C7 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.05□□□□□ -1.76
AMBRA1Q9C0C7 AC123904.3-201ENST00000547218 814 ntBASIC4.05□□□□□ -1.76
AMBRA1Q9C0C7 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.05□□□□□ -1.76
AMBRA1Q9C0C7 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.05□□□□□ -1.76
AMBRA1Q9C0C7 AL133153.1-201ENST00000557756 303 ntBASIC4.05□□□□□ -1.76
AMBRA1Q9C0C7 MIR3160-1-201ENST00000577972 85 ntBASIC4.05□□□□□ -1.76
AMBRA1Q9C0C7 AC015917.1-201ENST00000579654 510 ntBASIC4.05□□□□□ -1.76
AMBRA1Q9C0C7 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.05□□□□□ -1.76
AMBRA1Q9C0C7 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.05□□□□□ -1.76
AMBRA1Q9C0C7 AC112230.1-201ENST00000604342 547 ntBASIC4.05□□□□□ -1.76
AMBRA1Q9C0C7 AC008785.1-201ENST00000624475 456 ntBASIC4.05□□□□□ -1.76
AMBRA1Q9C0C7 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
AMBRA1Q9C0C7 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
AMBRA1Q9C0C7 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 139.3 ms