Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM55Q9BYV6 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
TRIM55Q9BYV6 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
TRIM55Q9BYV6 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
TRIM55Q9BYV6 AC103710.2-202ENST00000641454 2853 ntBASIC4.84□□□□□ -1.63
TRIM55Q9BYV6 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
TRIM55Q9BYV6 RNVU1-6-201ENST00000364688 164 ntBASIC4.84□□□□□ -1.63
TRIM55Q9BYV6 RNU4-66P-201ENST00000365199 138 ntBASIC4.84□□□□□ -1.63
TRIM55Q9BYV6 RNU6-38P-201ENST00000384085 107 ntBASIC4.84□□□□□ -1.63
TRIM55Q9BYV6 RNA5SP87-201ENST00000384155 118 ntBASIC4.84□□□□□ -1.63
TRIM55Q9BYV6 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TRIM55Q9BYV6 RNA5SP146-201ENST00000410743 123 ntBASIC4.84□□□□□ -1.63
TRIM55Q9BYV6 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4.84□□□□□ -1.63
TRIM55Q9BYV6 RPL7P46-201ENST00000425129 740 ntBASIC4.84□□□□□ -1.63
TRIM55Q9BYV6 ERLEC1P1-201ENST00000433806 578 ntBASIC4.84□□□□□ -1.63
TRIM55Q9BYV6 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.84□□□□□ -1.63
TRIM55Q9BYV6 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC4.84□□□□□ -1.63
TRIM55Q9BYV6 FABP5P13-201ENST00000452144 328 ntBASIC4.84□□□□□ -1.63
TRIM55Q9BYV6 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC4.84□□□□□ -1.63
TRIM55Q9BYV6 RPL23AP31-201ENST00000456160 467 ntBASIC4.84□□□□□ -1.63
TRIM55Q9BYV6 RNU6-333P-201ENST00000459117 107 ntBASIC4.84□□□□□ -1.63
TRIM55Q9BYV6 AP000873.1-201ENST00000463987 400 ntBASIC4.84□□□□□ -1.63
TRIM55Q9BYV6 RPL23AP11-201ENST00000475260 469 ntBASIC4.84□□□□□ -1.63
TRIM55Q9BYV6 RN7SL817P-201ENST00000480777 288 ntBASIC4.84□□□□□ -1.63
TRIM55Q9BYV6 AC008897.1-201ENST00000494006 347 ntBASIC4.84□□□□□ -1.63
TRIM55Q9BYV6 CEACAMP10-202ENST00000495431 496 ntBASIC4.84□□□□□ -1.63
TRIM55Q9BYV6 OR7H2P-201ENST00000513483 306 ntBASIC4.84□□□□□ -1.63
TRIM55Q9BYV6 NARSP2-201ENST00000518524 679 ntBASIC4.84□□□□□ -1.63
TRIM55Q9BYV6 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.84□□□□□ -1.63
TRIM55Q9BYV6 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.84□□□□□ -1.63
TRIM55Q9BYV6 RANP3-201ENST00000530970 276 ntBASIC4.84□□□□□ -1.63
TRIM55Q9BYV6 AC023050.3-201ENST00000541142 333 ntBASIC4.84□□□□□ -1.63
TRIM55Q9BYV6 AC008033.2-201ENST00000542626 177 ntBASIC4.84□□□□□ -1.63
TRIM55Q9BYV6 BNIP3P6-201ENST00000549284 499 ntBASIC4.84□□□□□ -1.63
TRIM55Q9BYV6 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.84□□□□□ -1.63
TRIM55Q9BYV6 AL355836.1-201ENST00000555951 870 ntBASIC4.84□□□□□ -1.63
TRIM55Q9BYV6 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
TRIM55Q9BYV6 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
TRIM55Q9BYV6 AP001330.4-201ENST00000604350 154 ntBASIC4.84□□□□□ -1.63
TRIM55Q9BYV6 RNU6-89P-201ENST00000606519 100 ntBASIC4.84□□□□□ -1.63
TRIM55Q9BYV6 MIR378J-201ENST00000611988 109 ntBASIC4.84□□□□□ -1.63
TRIM55Q9BYV6 AL365204.3-201ENST00000612448 685 ntBASIC4.84□□□□□ -1.63
TRIM55Q9BYV6 AC012409.4-201ENST00000612923 249 ntBASIC4.84□□□□□ -1.63
TRIM55Q9BYV6 RN7SL722P-201ENST00000617780 284 ntBASIC4.84□□□□□ -1.63
TRIM55Q9BYV6 RN7SL565P-201ENST00000618246 284 ntBASIC4.84□□□□□ -1.63
TRIM55Q9BYV6 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.84□□□□□ -1.63
TRIM55Q9BYV6 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TRIM55Q9BYV6 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
TRIM55Q9BYV6 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
TRIM55Q9BYV6 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.84□□□□□ -1.64
TRIM55Q9BYV6 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.84□□□□□ -1.64
TRIM55Q9BYV6 SDAD1P2-201ENST00000441308 2028 ntBASIC4.84□□□□□ -1.64
TRIM55Q9BYV6 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.84□□□□□ -1.64
TRIM55Q9BYV6 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.84□□□□□ -1.64
TRIM55Q9BYV6 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
TRIM55Q9BYV6 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM55Q9BYV6 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.83□□□□□ -1.64
TRIM55Q9BYV6 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.83□□□□□ -1.64
TRIM55Q9BYV6 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM55Q9BYV6 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM55Q9BYV6 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM55Q9BYV6 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.83□□□□□ -1.64
TRIM55Q9BYV6 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM55Q9BYV6 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.83□□□□□ -1.64
TRIM55Q9BYV6 RNU6-767P-201ENST00000384132 107 ntBASIC4.83□□□□□ -1.64
TRIM55Q9BYV6 RNU6-14P-201ENST00000384630 106 ntBASIC4.83□□□□□ -1.64
TRIM55Q9BYV6 RNA5SP372-201ENST00000390836 115 ntBASIC4.83□□□□□ -1.64
TRIM55Q9BYV6 RNU6-550P-201ENST00000391057 101 ntBASIC4.83□□□□□ -1.64
TRIM55Q9BYV6 RN7SKP140-201ENST00000411196 284 ntBASIC4.83□□□□□ -1.64
TRIM55Q9BYV6 RPL30P2-201ENST00000414021 291 ntBASIC4.83□□□□□ -1.64
TRIM55Q9BYV6 MTND3P23-201ENST00000431980 347 ntBASIC4.83□□□□□ -1.64
TRIM55Q9BYV6 RPL21P112-201ENST00000434403 463 ntBASIC4.83□□□□□ -1.64
TRIM55Q9BYV6 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.83□□□□□ -1.64
TRIM55Q9BYV6 MTND1P11-201ENST00000456661 876 ntBASIC4.83□□□□□ -1.64
TRIM55Q9BYV6 snoU13.4-201ENST00000458916 104 ntBASIC4.83□□□□□ -1.64
TRIM55Q9BYV6 AC092451.1-201ENST00000480211 153 ntBASIC4.83□□□□□ -1.64
TRIM55Q9BYV6 RPL21P99-201ENST00000480369 423 ntBASIC4.83□□□□□ -1.64
TRIM55Q9BYV6 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.83□□□□□ -1.64
TRIM55Q9BYV6 RN7SKP60-201ENST00000516985 239 ntBASIC4.83□□□□□ -1.64
TRIM55Q9BYV6 RNU6-685P-201ENST00000517088 95 ntBASIC4.83□□□□□ -1.64
TRIM55Q9BYV6 IGKV2D-23-201ENST00000518179 286 ntBASIC4.83□□□□□ -1.64
TRIM55Q9BYV6 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC4.83□□□□□ -1.64
TRIM55Q9BYV6 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM55Q9BYV6 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.83□□□□□ -1.64
TRIM55Q9BYV6 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.83□□□□□ -1.64
TRIM55Q9BYV6 AC078814.3-201ENST00000553036 491 ntBASIC4.83□□□□□ -1.64
TRIM55Q9BYV6 FKBP1BP1-201ENST00000553366 325 ntBASIC4.83□□□□□ -1.64
TRIM55Q9BYV6 AC007424.1-203ENST00000554613 687 ntBASIC4.83□□□□□ -1.64
TRIM55Q9BYV6 MED28P6-201ENST00000558776 231 ntBASIC4.83□□□□□ -1.64
TRIM55Q9BYV6 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.83□□□□□ -1.64
TRIM55Q9BYV6 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.83□□□□□ -1.64
TRIM55Q9BYV6 AL031320.1-201ENST00000604177 357 ntBASIC4.83□□□□□ -1.64
TRIM55Q9BYV6 AC104763.2-201ENST00000604179 382 ntBASIC4.83□□□□□ -1.64
TRIM55Q9BYV6 AL136221.1-201ENST00000621449 509 ntBASIC4.83□□□□□ -1.64
TRIM55Q9BYV6 AC067931.1-201ENST00000624190 671 ntBASIC4.83□□□□□ -1.64
TRIM55Q9BYV6 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.83□□□□□ -1.64
TRIM55Q9BYV6 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM55Q9BYV6 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.83□□□□□ -1.64
TRIM55Q9BYV6 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM55Q9BYV6 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 137.1 ms