Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.09□□□□□ -1.59
PHC3Q8NDX5 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PHC3Q8NDX5 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
PHC3Q8NDX5 AL139811.1-201ENST00000424779 2299 ntBASIC5.08□□□□□ -1.6
PHC3Q8NDX5 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PHC3Q8NDX5 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PHC3Q8NDX5 SALL4P2-201ENST00000423288 2910 ntBASIC5.08□□□□□ -1.6
PHC3Q8NDX5 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.08□□□□□ -1.6
PHC3Q8NDX5 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC5.08□□□□□ -1.6
PHC3Q8NDX5 Y_RNA.187-201ENST00000363918 113 ntBASIC5.08□□□□□ -1.6
PHC3Q8NDX5 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PHC3Q8NDX5 RNU6-1160P-201ENST00000384546 104 ntBASIC5.08□□□□□ -1.6
PHC3Q8NDX5 SNORD70.1-201ENST00000391007 85 ntBASIC5.08□□□□□ -1.6
PHC3Q8NDX5 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.08□□□□□ -1.6
PHC3Q8NDX5 Z82205.1-201ENST00000428456 297 ntBASIC5.08□□□□□ -1.6
PHC3Q8NDX5 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.08□□□□□ -1.6
PHC3Q8NDX5 AC090774.1-201ENST00000435925 246 ntBASIC5.08□□□□□ -1.6
PHC3Q8NDX5 AL389915.2-201ENST00000454576 441 ntBASIC5.08□□□□□ -1.6
PHC3Q8NDX5 AC106872.2-201ENST00000494303 480 ntBASIC5.08□□□□□ -1.6
PHC3Q8NDX5 SNRPCP2-201ENST00000504370 475 ntBASIC5.08□□□□□ -1.6
PHC3Q8NDX5 IL7-206ENST00000520269 456 ntTSL 3 BASIC5.08□□□□□ -1.6
PHC3Q8NDX5 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC5.08□□□□□ -1.6
PHC3Q8NDX5 COPS8P3-201ENST00000526024 482 ntBASIC5.08□□□□□ -1.6
PHC3Q8NDX5 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC5.08□□□□□ -1.6
PHC3Q8NDX5 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.08□□□□□ -1.6
PHC3Q8NDX5 OR4H12P-201ENST00000556269 907 ntBASIC5.08□□□□□ -1.6
PHC3Q8NDX5 AC012182.1-201ENST00000570133 895 ntBASIC5.08□□□□□ -1.6
PHC3Q8NDX5 HNRNPCP4-201ENST00000571636 900 ntBASIC5.08□□□□□ -1.6
PHC3Q8NDX5 AC022884.2-201ENST00000578535 580 ntBASIC5.08□□□□□ -1.6
PHC3Q8NDX5 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.08□□□□□ -1.6
PHC3Q8NDX5 AC007448.1-201ENST00000582714 234 ntBASIC5.08□□□□□ -1.6
PHC3Q8NDX5 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
PHC3Q8NDX5 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC5.08□□□□□ -1.6
PHC3Q8NDX5 AC104763.2-201ENST00000604179 382 ntBASIC5.08□□□□□ -1.6
PHC3Q8NDX5 AC013244.1-201ENST00000604279 193 ntBASIC5.08□□□□□ -1.6
PHC3Q8NDX5 AC116312.1-201ENST00000606841 314 ntBASIC5.08□□□□□ -1.6
PHC3Q8NDX5 MIR6719-201ENST00000622428 87 ntBASIC5.08□□□□□ -1.6
PHC3Q8NDX5 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC5.08□□□□□ -1.6
PHC3Q8NDX5 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.08□□□□□ -1.6
PHC3Q8NDX5 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
PHC3Q8NDX5 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
PHC3Q8NDX5 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PHC3Q8NDX5 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.08□□□□□ -1.6
PHC3Q8NDX5 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.08□□□□□ -1.6
PHC3Q8NDX5 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.07□□□□□ -1.6
PHC3Q8NDX5 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
PHC3Q8NDX5 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
PHC3Q8NDX5 RPL32P3-201ENST00000359025 275 ntBASIC5.07□□□□□ -1.6
PHC3Q8NDX5 RN7SKP113-201ENST00000363891 295 ntBASIC5.07□□□□□ -1.6
PHC3Q8NDX5 Y_RNA.399-201ENST00000383955 105 ntBASIC5.07□□□□□ -1.6
PHC3Q8NDX5 RNU6-434P-201ENST00000384376 107 ntBASIC5.07□□□□□ -1.6
PHC3Q8NDX5 RNU6-393P-201ENST00000384475 107 ntBASIC5.07□□□□□ -1.6
PHC3Q8NDX5 AL360182.1-201ENST00000397433 468 ntBASIC5.07□□□□□ -1.6
PHC3Q8NDX5 MIR450B-201ENST00000401182 78 ntBASIC5.07□□□□□ -1.6
PHC3Q8NDX5 SPTLC1P2-201ENST00000407089 121 ntBASIC5.07□□□□□ -1.6
PHC3Q8NDX5 RNU4-34P-201ENST00000410431 124 ntBASIC5.07□□□□□ -1.6
PHC3Q8NDX5 VDAC1P9-201ENST00000412766 841 ntBASIC5.07□□□□□ -1.6
PHC3Q8NDX5 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.07□□□□□ -1.6
PHC3Q8NDX5 SSXP9-201ENST00000417503 292 ntBASIC5.07□□□□□ -1.6
PHC3Q8NDX5 DDX39BP1-205ENST00000422507 192 ntBASIC5.07□□□□□ -1.6
PHC3Q8NDX5 PPP1R11P2-201ENST00000423543 382 ntBASIC5.07□□□□□ -1.6
PHC3Q8NDX5 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC5.07□□□□□ -1.6
PHC3Q8NDX5 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.07□□□□□ -1.6
PHC3Q8NDX5 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.07□□□□□ -1.6
PHC3Q8NDX5 MTND1P17-201ENST00000448961 204 ntBASIC5.07□□□□□ -1.6
PHC3Q8NDX5 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.07□□□□□ -1.6
PHC3Q8NDX5 AC092647.2-201ENST00000452998 253 ntBASIC5.07□□□□□ -1.6
PHC3Q8NDX5 Y_RNA.653-201ENST00000459091 95 ntBASIC5.07□□□□□ -1.6
PHC3Q8NDX5 AL163540.1-201ENST00000485382 386 ntBASIC5.07□□□□□ -1.6
PHC3Q8NDX5 AC008638.1-201ENST00000506035 866 ntBASIC5.07□□□□□ -1.6
PHC3Q8NDX5 RN7SKP260-201ENST00000516907 149 ntBASIC5.07□□□□□ -1.6
PHC3Q8NDX5 RNU6-840P-201ENST00000517275 65 ntBASIC5.07□□□□□ -1.6
PHC3Q8NDX5 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC5.07□□□□□ -1.6
PHC3Q8NDX5 AP006587.4-201ENST00000526053 529 ntBASIC5.07□□□□□ -1.6
PHC3Q8NDX5 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.07□□□□□ -1.6
PHC3Q8NDX5 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC5.07□□□□□ -1.6
PHC3Q8NDX5 AC006116.10-201ENST00000591836 581 ntBASIC5.07□□□□□ -1.6
PHC3Q8NDX5 OR7E18P-201ENST00000592589 702 ntBASIC5.07□□□□□ -1.6
PHC3Q8NDX5 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.07□□□□□ -1.6
PHC3Q8NDX5 AC099669.2-201ENST00000616549 437 ntBASIC5.07□□□□□ -1.6
PHC3Q8NDX5 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
PHC3Q8NDX5 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PHC3Q8NDX5 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
PHC3Q8NDX5 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.07□□□□□ -1.6
PHC3Q8NDX5 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PHC3Q8NDX5 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
PHC3Q8NDX5 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PHC3Q8NDX5 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
PHC3Q8NDX5 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.06□□□□□ -1.6
PHC3Q8NDX5 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.06□□□□□ -1.6
PHC3Q8NDX5 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.06□□□□□ -1.6
PHC3Q8NDX5 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PHC3Q8NDX5 PNPT1P2-201ENST00000456768 2050 ntBASIC5.06□□□□□ -1.6
PHC3Q8NDX5 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
PHC3Q8NDX5 Y_RNA.197-201ENST00000364004 102 ntBASIC5.06□□□□□ -1.6
PHC3Q8NDX5 SNORA33.2-201ENST00000365413 134 ntBASIC5.06□□□□□ -1.6
PHC3Q8NDX5 Y_RNA.482-201ENST00000384377 111 ntBASIC5.06□□□□□ -1.6
PHC3Q8NDX5 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
PHC3Q8NDX5 MIR1182-201ENST00000408363 97 ntBASIC5.06□□□□□ -1.6
PHC3Q8NDX5 RPL7AP73-201ENST00000413490 353 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 196.9 ms