Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
UBR4Q5T4S7 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.1□□□□□ -2.23
UBR4Q5T4S7 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
UBR4Q5T4S7 ZNF33BP1-201ENST00000452497 1834 ntBASIC1.1□□□□□ -2.23
UBR4Q5T4S7 SNORA7.1-201ENST00000363750 139 ntBASIC1.1□□□□□ -2.23
UBR4Q5T4S7 SKINT1L-201ENST00000401057 817 ntBASIC1.1□□□□□ -2.23
UBR4Q5T4S7 BX679664.1-201ENST00000434429 253 ntBASIC1.1□□□□□ -2.23
UBR4Q5T4S7 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.1□□□□□ -2.23
UBR4Q5T4S7 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC1.1□□□□□ -2.23
UBR4Q5T4S7 MTCO1P48-201ENST00000448024 1096 ntBASIC1.1□□□□□ -2.23
UBR4Q5T4S7 RPS6P4-201ENST00000494693 758 ntBASIC1.1□□□□□ -2.23
UBR4Q5T4S7 AC121161.1-201ENST00000510606 652 ntBASIC1.1□□□□□ -2.23
UBR4Q5T4S7 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.1□□□□□ -2.23
UBR4Q5T4S7 CYCSP2-201ENST00000558168 301 ntBASIC1.1□□□□□ -2.23
UBR4Q5T4S7 FAM157A-202ENST00000615155 405 ntBASIC1.1□□□□□ -2.23
UBR4Q5T4S7 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC1.1□□□□□ -2.23
UBR4Q5T4S7 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
UBR4Q5T4S7 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
UBR4Q5T4S7 RNA5SP205-201ENST00000364653 136 ntBASIC1.1□□□□□ -2.23
UBR4Q5T4S7 RNU4-31P-201ENST00000384211 141 ntBASIC1.1□□□□□ -2.23
UBR4Q5T4S7 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
UBR4Q5T4S7 MTRNR2L2-201ENST00000604882 87 ntBASIC1.1□□□□□ -2.23
UBR4Q5T4S7 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.1□□□□□ -2.23
UBR4Q5T4S7 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
UBR4Q5T4S7 AC000123.3-201ENST00000624029 4975 ntBASIC1.1□□□□□ -2.23
UBR4Q5T4S7 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
UBR4Q5T4S7 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.1□□□□□ -2.23
UBR4Q5T4S7 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
UBR4Q5T4S7 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
UBR4Q5T4S7 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC1.1□□□□□ -2.23
UBR4Q5T4S7 AL365400.1-201ENST00000431854 640 ntBASIC1.1□□□□□ -2.23
UBR4Q5T4S7 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.1□□□□□ -2.23
UBR4Q5T4S7 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.1□□□□□ -2.23
UBR4Q5T4S7 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
UBR4Q5T4S7 RNU1-100P-201ENST00000365255 165 ntBASIC1.09□□□□□ -2.23
UBR4Q5T4S7 AL138799.3-201ENST00000438968 350 ntBASIC1.09□□□□□ -2.23
UBR4Q5T4S7 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.09□□□□□ -2.23
UBR4Q5T4S7 STMN1P1-201ENST00000617809 440 ntBASIC1.09□□□□□ -2.23
UBR4Q5T4S7 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
UBR4Q5T4S7 MAPK10-266ENST00000641066 6555 ntBASIC1.09□□□□□ -2.23
UBR4Q5T4S7 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.09□□□□□ -2.23
UBR4Q5T4S7 PROS2P-201ENST00000474651 1951 ntBASIC1.09□□□□□ -2.23
UBR4Q5T4S7 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC1.09□□□□□ -2.23
UBR4Q5T4S7 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC1.09□□□□□ -2.23
UBR4Q5T4S7 MTND5P19-201ENST00000424872 1794 ntBASIC1.09□□□□□ -2.23
UBR4Q5T4S7 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
UBR4Q5T4S7 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
UBR4Q5T4S7 CDC42P1-201ENST00000456658 548 ntBASIC1.09□□□□□ -2.23
UBR4Q5T4S7 RPL9P9-202ENST00000466501 579 ntBASIC1.09□□□□□ -2.23
UBR4Q5T4S7 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC1.09□□□□□ -2.23
UBR4Q5T4S7 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC1.09□□□□□ -2.23
UBR4Q5T4S7 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.09□□□□□ -2.23
UBR4Q5T4S7 AC016877.3-201ENST00000606778 504 ntBASIC1.09□□□□□ -2.23
UBR4Q5T4S7 MIR6766-201ENST00000622641 72 ntBASIC1.09□□□□□ -2.23
UBR4Q5T4S7 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.09□□□□□ -2.23
UBR4Q5T4S7 SNORA41-201ENST00000384675 132 ntBASIC1.09□□□□□ -2.24
UBR4Q5T4S7 MTCO2P17-201ENST00000424336 677 ntBASIC1.09□□□□□ -2.24
UBR4Q5T4S7 AC027124.2-201ENST00000428249 105 ntBASIC1.09□□□□□ -2.24
UBR4Q5T4S7 AP000936.3-201ENST00000438127 255 ntBASIC1.09□□□□□ -2.24
UBR4Q5T4S7 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.09□□□□□ -2.24
UBR4Q5T4S7 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.09□□□□□ -2.24
UBR4Q5T4S7 SNORA31.11-201ENST00000516528 139 ntBASIC1.09□□□□□ -2.24
UBR4Q5T4S7 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
UBR4Q5T4S7 AC074029.2-201ENST00000551045 634 ntBASIC1.09□□□□□ -2.24
UBR4Q5T4S7 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.09□□□□□ -2.24
UBR4Q5T4S7 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
UBR4Q5T4S7 AC025033.1-201ENST00000463883 194 ntBASIC1.09□□□□□ -2.24
UBR4Q5T4S7 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC1.09□□□□□ -2.24
UBR4Q5T4S7 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC1.09□□□□□ -2.24
UBR4Q5T4S7 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC1.09□□□□□ -2.24
UBR4Q5T4S7 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC1.09□□□□□ -2.24
UBR4Q5T4S7 MIR329-1-201ENST00000385028 80 ntBASIC1.08□□□□□ -2.24
UBR4Q5T4S7 AC097499.1-201ENST00000444277 208 ntBASIC1.08□□□□□ -2.24
UBR4Q5T4S7 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.08□□□□□ -2.24
UBR4Q5T4S7 MIR6132-201ENST00000622083 109 ntBASIC1.08□□□□□ -2.24
UBR4Q5T4S7 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC1.08□□□□□ -2.24
UBR4Q5T4S7 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.08□□□□□ -2.24
UBR4Q5T4S7 RNA5SP383-201ENST00000362934 120 ntBASIC1.08□□□□□ -2.24
UBR4Q5T4S7 RNU6-1080P-201ENST00000383982 107 ntBASIC1.08□□□□□ -2.24
UBR4Q5T4S7 AL606490.7-201ENST00000433136 191 ntBASIC1.08□□□□□ -2.24
UBR4Q5T4S7 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.08□□□□□ -2.24
UBR4Q5T4S7 IGHV3-76-201ENST00000522465 295 ntBASIC1.08□□□□□ -2.24
UBR4Q5T4S7 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC1.08□□□□□ -2.24
UBR4Q5T4S7 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC1.08□□□□□ -2.24
UBR4Q5T4S7 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
UBR4Q5T4S7 Y_RNA.610-201ENST00000410681 103 ntBASIC1.08□□□□□ -2.24
UBR4Q5T4S7 AL161788.1-201ENST00000441805 169 ntBASIC1.08□□□□□ -2.24
UBR4Q5T4S7 CALM1P1-201ENST00000442082 433 ntBASIC1.08□□□□□ -2.24
UBR4Q5T4S7 RNA5SP57-201ENST00000459463 123 ntBASIC1.08□□□□□ -2.24
UBR4Q5T4S7 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC1.08□□□□□ -2.24
UBR4Q5T4S7 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.08□□□□□ -2.24
UBR4Q5T4S7 AC002550.2-201ENST00000621246 394 ntBASIC1.08□□□□□ -2.24
UBR4Q5T4S7 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.08□□□□□ -2.24
UBR4Q5T4S7 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
UBR4Q5T4S7 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC1.08□□□□□ -2.24
UBR4Q5T4S7 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
UBR4Q5T4S7 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC1.08□□□□□ -2.24
UBR4Q5T4S7 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
UBR4Q5T4S7 RNU6-16P-201ENST00000384385 107 ntBASIC1.08□□□□□ -2.24
UBR4Q5T4S7 PAICSP7-201ENST00000419829 962 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms