Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CD40P25942 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
CD40P25942 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.22□□□□□ -1.73
CD40P25942 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
CD40P25942 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.22□□□□□ -1.73
CD40P25942 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CD40P25942 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CD40P25942 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
CD40P25942 RNVU1-6-201ENST00000364688 164 ntBASIC4.22□□□□□ -1.73
CD40P25942 RNU6-1013P-201ENST00000384180 107 ntBASIC4.22□□□□□ -1.73
CD40P25942 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CD40P25942 AL357515.1-201ENST00000402967 542 ntBASIC4.22□□□□□ -1.73
CD40P25942 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.22□□□□□ -1.73
CD40P25942 RN7SKP100-201ENST00000411258 284 ntBASIC4.22□□□□□ -1.73
CD40P25942 AL591848.1-201ENST00000413092 322 ntBASIC4.22□□□□□ -1.73
CD40P25942 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.22□□□□□ -1.73
CD40P25942 AC068287.1-201ENST00000430283 295 ntBASIC4.22□□□□□ -1.73
CD40P25942 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.22□□□□□ -1.73
CD40P25942 USP9YP7-201ENST00000436723 430 ntBASIC4.22□□□□□ -1.73
CD40P25942 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CD40P25942 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.22□□□□□ -1.73
CD40P25942 AC000111.2-201ENST00000448200 210 ntBASIC4.22□□□□□ -1.73
CD40P25942 USP9YP32-201ENST00000452432 430 ntBASIC4.22□□□□□ -1.73
CD40P25942 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.22□□□□□ -1.73
CD40P25942 RPL23AP31-201ENST00000456160 467 ntBASIC4.22□□□□□ -1.73
CD40P25942 MTND4P17-201ENST00000470444 350 ntBASIC4.22□□□□□ -1.73
CD40P25942 AC092451.1-201ENST00000480211 153 ntBASIC4.22□□□□□ -1.73
CD40P25942 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.22□□□□□ -1.73
CD40P25942 HMGN1P13-201ENST00000505795 138 ntBASIC4.22□□□□□ -1.73
CD40P25942 RNU6-189P-201ENST00000516120 101 ntBASIC4.22□□□□□ -1.73
CD40P25942 RN7SKP276-201ENST00000516242 268 ntBASIC4.22□□□□□ -1.73
CD40P25942 RNU6-864P-201ENST00000516256 108 ntBASIC4.22□□□□□ -1.73
CD40P25942 Vault.1-201ENST00000516474 102 ntBASIC4.22□□□□□ -1.73
CD40P25942 FTH1P11-201ENST00000517577 551 ntBASIC4.22□□□□□ -1.73
CD40P25942 AL359219.2-201ENST00000555184 348 ntBASIC4.22□□□□□ -1.73
CD40P25942 AC087477.6-201ENST00000559595 843 ntBASIC4.22□□□□□ -1.73
CD40P25942 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.22□□□□□ -1.73
CD40P25942 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC4.22□□□□□ -1.73
CD40P25942 AL022345.1-201ENST00000607292 135 ntBASIC4.22□□□□□ -1.73
CD40P25942 AC007497.1-201ENST00000610421 561 ntBASIC4.22□□□□□ -1.73
CD40P25942 MIR6748-201ENST00000610433 71 ntBASIC4.22□□□□□ -1.73
CD40P25942 AC007546.1-201ENST00000619452 559 ntBASIC4.22□□□□□ -1.73
CD40P25942 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CD40P25942 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.22□□□□□ -1.73
CD40P25942 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
CD40P25942 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CD40P25942 OR4G2P-202ENST00000641004 1759 ntBASIC4.22□□□□□ -1.73
CD40P25942 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CD40P25942 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CD40P25942 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CD40P25942 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CD40P25942 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
CD40P25942 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.21□□□□□ -1.73
CD40P25942 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CD40P25942 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.21□□□□□ -1.74
CD40P25942 HSPA8P4-201ENST00000511877 1920 ntBASIC4.21□□□□□ -1.74
CD40P25942 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CD40P25942 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
CD40P25942 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.21□□□□□ -1.74
CD40P25942 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CD40P25942 AC121333.1-201ENST00000567488 2709 ntBASIC4.21□□□□□ -1.74
CD40P25942 NEAT1-202ENST00000501122 22743 ntBASIC4.21□□□□□ -1.74
CD40P25942 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CD40P25942 RNU6-715P-201ENST00000365204 103 ntBASIC4.21□□□□□ -1.74
CD40P25942 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CD40P25942 Y_RNA.474-201ENST00000384341 102 ntBASIC4.21□□□□□ -1.74
CD40P25942 AL356967.1-201ENST00000406305 431 ntBASIC4.21□□□□□ -1.74
CD40P25942 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.21□□□□□ -1.74
CD40P25942 RPS12P24-201ENST00000412619 387 ntBASIC4.21□□□□□ -1.74
CD40P25942 BX682237.1-201ENST00000415016 335 ntBASIC4.21□□□□□ -1.74
CD40P25942 AL590139.1-201ENST00000416267 400 ntBASIC4.21□□□□□ -1.74
CD40P25942 EI24P1-201ENST00000416584 867 ntBASIC4.21□□□□□ -1.74
CD40P25942 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.21□□□□□ -1.74
CD40P25942 NRBF2P3-201ENST00000432731 865 ntBASIC4.21□□□□□ -1.74
CD40P25942 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.21□□□□□ -1.74
CD40P25942 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.21□□□□□ -1.74
CD40P25942 CYCSP24-201ENST00000445119 316 ntBASIC4.21□□□□□ -1.74
CD40P25942 PRDX3P3-201ENST00000447765 522 ntBASIC4.21□□□□□ -1.74
CD40P25942 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.21□□□□□ -1.74
CD40P25942 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.21□□□□□ -1.74
CD40P25942 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC4.21□□□□□ -1.74
CD40P25942 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC4.21□□□□□ -1.74
CD40P25942 RNA5SP392-201ENST00000516905 112 ntBASIC4.21□□□□□ -1.74
CD40P25942 Y_RNA.719-201ENST00000517156 106 ntBASIC4.21□□□□□ -1.74
CD40P25942 HMGB1P19-201ENST00000517578 577 ntBASIC4.21□□□□□ -1.74
CD40P25942 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.21□□□□□ -1.74
CD40P25942 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.21□□□□□ -1.74
CD40P25942 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.21□□□□□ -1.74
CD40P25942 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.21□□□□□ -1.74
CD40P25942 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.21□□□□□ -1.74
CD40P25942 MED28P6-201ENST00000558776 231 ntBASIC4.21□□□□□ -1.74
CD40P25942 RPL23AP87-202ENST00000573039 466 ntBASIC4.21□□□□□ -1.74
CD40P25942 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.21□□□□□ -1.74
CD40P25942 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.21□□□□□ -1.74
CD40P25942 ATP1B3P1-201ENST00000605365 821 ntBASIC4.21□□□□□ -1.74
CD40P25942 AC016727.1-205ENST00000605437 569 ntBASIC4.21□□□□□ -1.74
CD40P25942 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.21□□□□□ -1.74
CD40P25942 U2.17-201ENST00000611454 95 ntBASIC4.21□□□□□ -1.74
CD40P25942 uc_338.15-201ENST00000615470 191 ntBASIC4.21□□□□□ -1.74
CD40P25942 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms