Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
COL6A2P12110 EXOC5P1-201ENST00000510543 1969 ntBASIC4.62□□□□□ -1.67
COL6A2P12110 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.62□□□□□ -1.67
COL6A2P12110 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
COL6A2P12110 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
COL6A2P12110 Y_RNA.301-201ENST00000364990 103 ntBASIC4.62□□□□□ -1.67
COL6A2P12110 SNORD115-7-201ENST00000365306 82 ntBASIC4.62□□□□□ -1.67
COL6A2P12110 RNU6-61P-201ENST00000365528 109 ntBASIC4.62□□□□□ -1.67
COL6A2P12110 Y_RNA.493-201ENST00000384422 102 ntBASIC4.62□□□□□ -1.67
COL6A2P12110 SNORA70E-201ENST00000384492 135 ntBASIC4.62□□□□□ -1.67
COL6A2P12110 Y_RNA.530-201ENST00000384587 101 ntBASIC4.62□□□□□ -1.67
COL6A2P12110 AL359634.1-202ENST00000404721 284 ntBASIC4.62□□□□□ -1.67
COL6A2P12110 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.62□□□□□ -1.67
COL6A2P12110 RNU6-387P-201ENST00000411331 105 ntBASIC4.62□□□□□ -1.67
COL6A2P12110 AL591848.1-201ENST00000413092 322 ntBASIC4.62□□□□□ -1.67
COL6A2P12110 BTF3L4P3-201ENST00000418879 476 ntBASIC4.62□□□□□ -1.67
COL6A2P12110 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.62□□□□□ -1.67
COL6A2P12110 BEND7P1-201ENST00000422058 457 ntBASIC4.62□□□□□ -1.67
COL6A2P12110 RPL21P91-201ENST00000429231 479 ntBASIC4.62□□□□□ -1.67
COL6A2P12110 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.62□□□□□ -1.67
COL6A2P12110 H2AFZP5-201ENST00000446960 382 ntBASIC4.62□□□□□ -1.67
COL6A2P12110 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC4.62□□□□□ -1.67
COL6A2P12110 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.62□□□□□ -1.67
COL6A2P12110 AC079168.2-201ENST00000453977 416 ntBASIC4.62□□□□□ -1.67
COL6A2P12110 PPP1R2P5-201ENST00000457256 603 ntBASIC4.62□□□□□ -1.67
COL6A2P12110 S100A11P1-201ENST00000477525 312 ntBASIC4.62□□□□□ -1.67
COL6A2P12110 RPS15AP36-201ENST00000492022 382 ntBASIC4.62□□□□□ -1.67
COL6A2P12110 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.62□□□□□ -1.67
COL6A2P12110 MTCO1P29-201ENST00000496868 288 ntBASIC4.62□□□□□ -1.67
COL6A2P12110 AC091868.1-201ENST00000508746 304 ntBASIC4.62□□□□□ -1.67
COL6A2P12110 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC4.62□□□□□ -1.67
COL6A2P12110 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.62□□□□□ -1.67
COL6A2P12110 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.62□□□□□ -1.67
COL6A2P12110 RPL7P20-201ENST00000520308 745 ntBASIC4.62□□□□□ -1.67
COL6A2P12110 AC090151.1-201ENST00000520784 730 ntBASIC4.62□□□□□ -1.67
COL6A2P12110 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.62□□□□□ -1.67
COL6A2P12110 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.62□□□□□ -1.67
COL6A2P12110 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.62□□□□□ -1.67
COL6A2P12110 AL161713.1-201ENST00000555538 145 ntBASIC4.62□□□□□ -1.67
COL6A2P12110 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.62□□□□□ -1.67
COL6A2P12110 AC091178.1-203ENST00000584586 279 ntBASIC4.62□□□□□ -1.67
COL6A2P12110 AC008638.3-201ENST00000603341 463 ntBASIC4.62□□□□□ -1.67
COL6A2P12110 AL391358.1-201ENST00000605342 190 ntBASIC4.62□□□□□ -1.67
COL6A2P12110 AC090510.2-201ENST00000617465 629 ntBASIC4.62□□□□□ -1.67
COL6A2P12110 MIR6130-201ENST00000619419 109 ntBASIC4.62□□□□□ -1.67
COL6A2P12110 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
COL6A2P12110 AC025034.2-201ENST00000623264 286 ntBASIC4.62□□□□□ -1.67
COL6A2P12110 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.62□□□□□ -1.67
COL6A2P12110 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.62□□□□□ -1.67
COL6A2P12110 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
COL6A2P12110 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
COL6A2P12110 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
COL6A2P12110 MTND4P14-201ENST00000435799 1354 ntBASIC4.62□□□□□ -1.67
COL6A2P12110 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
COL6A2P12110 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
COL6A2P12110 AL442639.1-201ENST00000625030 1899 ntBASIC4.62□□□□□ -1.67
COL6A2P12110 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
COL6A2P12110 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
COL6A2P12110 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
COL6A2P12110 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
COL6A2P12110 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
COL6A2P12110 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
COL6A2P12110 AC244517.1-201ENST00000606030 2086 ntBASIC4.61□□□□□ -1.67
COL6A2P12110 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
COL6A2P12110 MTCO1P24-201ENST00000515438 1558 ntBASIC4.61□□□□□ -1.67
COL6A2P12110 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.61□□□□□ -1.67
COL6A2P12110 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
COL6A2P12110 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.61□□□□□ -1.67
COL6A2P12110 Y_RNA.373-201ENST00000365600 103 ntBASIC4.61□□□□□ -1.67
COL6A2P12110 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
COL6A2P12110 RNU6-1279P-201ENST00000383917 103 ntBASIC4.61□□□□□ -1.67
COL6A2P12110 MIR765-201ENST00000390226 114 ntBASIC4.61□□□□□ -1.67
COL6A2P12110 MIR708-201ENST00000390708 88 ntBASIC4.61□□□□□ -1.67
COL6A2P12110 RNU1-82P-201ENST00000390851 165 ntBASIC4.61□□□□□ -1.67
COL6A2P12110 CYB5AP4-201ENST00000396692 399 ntBASIC4.61□□□□□ -1.67
COL6A2P12110 RNU4-65P-201ENST00000410473 140 ntBASIC4.61□□□□□ -1.67
COL6A2P12110 Y_RNA.625-201ENST00000411256 107 ntBASIC4.61□□□□□ -1.67
COL6A2P12110 RPL23AP27-201ENST00000415161 451 ntBASIC4.61□□□□□ -1.67
COL6A2P12110 AC114491.1-201ENST00000416095 246 ntBASIC4.61□□□□□ -1.67
COL6A2P12110 PDSS1P1-201ENST00000422953 1114 ntBASIC4.61□□□□□ -1.67
COL6A2P12110 AC018630.2-202ENST00000422992 927 ntBASIC4.61□□□□□ -1.67
COL6A2P12110 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.61□□□□□ -1.67
COL6A2P12110 RPL23AP33-201ENST00000442301 452 ntBASIC4.61□□□□□ -1.67
COL6A2P12110 AC112498.1-201ENST00000444401 332 ntBASIC4.61□□□□□ -1.67
COL6A2P12110 RPL23AP43-201ENST00000446445 471 ntBASIC4.61□□□□□ -1.67
COL6A2P12110 MTND4P19-201ENST00000446659 478 ntBASIC4.61□□□□□ -1.67
COL6A2P12110 AC073850.1-201ENST00000449243 255 ntBASIC4.61□□□□□ -1.67
COL6A2P12110 AC007967.1-201ENST00000455422 1159 ntBASIC4.61□□□□□ -1.67
COL6A2P12110 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.61□□□□□ -1.67
COL6A2P12110 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.61□□□□□ -1.67
COL6A2P12110 AC012158.1-204ENST00000483430 465 ntBASIC4.61□□□□□ -1.67
COL6A2P12110 AC083829.1-201ENST00000503756 657 ntBASIC4.61□□□□□ -1.67
COL6A2P12110 SCARNA22-201ENST00000503991 125 ntBASIC4.61□□□□□ -1.67
COL6A2P12110 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
COL6A2P12110 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.61□□□□□ -1.67
COL6A2P12110 OR51K1P-201ENST00000510214 950 ntBASIC4.61□□□□□ -1.67
COL6A2P12110 MTND4P7-201ENST00000523876 130 ntBASIC4.61□□□□□ -1.67
COL6A2P12110 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.61□□□□□ -1.67
COL6A2P12110 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.61□□□□□ -1.67
COL6A2P12110 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms