Protein–RNA interactions for Protein: A6NCW0

USP17L3, Ubiquitin carboxyl-terminal hydrolase 17-like protein 3, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L3A6NCW0 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.94□□□□□ -1.46
USP17L3A6NCW0 CYCSP43-201ENST00000438233 310 ntBASIC5.94□□□□□ -1.46
USP17L3A6NCW0 AL450023.3-201ENST00000440592 271 ntBASIC5.94□□□□□ -1.46
USP17L3A6NCW0 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.94□□□□□ -1.46
USP17L3A6NCW0 RPL37P6-202ENST00000464216 403 ntBASIC5.94□□□□□ -1.46
USP17L3A6NCW0 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.94□□□□□ -1.46
USP17L3A6NCW0 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.94□□□□□ -1.46
USP17L3A6NCW0 AP001086.1-201ENST00000494882 321 ntBASIC5.94□□□□□ -1.46
USP17L3A6NCW0 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC5.94□□□□□ -1.46
USP17L3A6NCW0 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC5.94□□□□□ -1.46
USP17L3A6NCW0 RNU2-69P-201ENST00000516061 100 ntBASIC5.94□□□□□ -1.46
USP17L3A6NCW0 RNU6-390P-201ENST00000516259 103 ntBASIC5.94□□□□□ -1.46
USP17L3A6NCW0 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
USP17L3A6NCW0 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.94□□□□□ -1.46
USP17L3A6NCW0 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.94□□□□□ -1.46
USP17L3A6NCW0 BNIP3P16-201ENST00000589779 534 ntBASIC5.94□□□□□ -1.46
USP17L3A6NCW0 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.94□□□□□ -1.46
USP17L3A6NCW0 AC092608.2-201ENST00000624427 218 ntBASIC5.94□□□□□ -1.46
USP17L3A6NCW0 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.94□□□□□ -1.46
USP17L3A6NCW0 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
USP17L3A6NCW0 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
USP17L3A6NCW0 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
USP17L3A6NCW0 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
USP17L3A6NCW0 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
USP17L3A6NCW0 BTBD10P1-201ENST00000549824 1352 ntBASIC5.93□□□□□ -1.46
USP17L3A6NCW0 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
USP17L3A6NCW0 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
USP17L3A6NCW0 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
USP17L3A6NCW0 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
USP17L3A6NCW0 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
USP17L3A6NCW0 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
USP17L3A6NCW0 Y_RNA.463-201ENST00000384271 102 ntBASIC5.93□□□□□ -1.46
USP17L3A6NCW0 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
USP17L3A6NCW0 Y_RNA.618-201ENST00000410949 107 ntBASIC5.93□□□□□ -1.46
USP17L3A6NCW0 AC099677.1-201ENST00000420575 175 ntBASIC5.93□□□□□ -1.46
USP17L3A6NCW0 AL731563.1-201ENST00000442202 214 ntBASIC5.93□□□□□ -1.46
USP17L3A6NCW0 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC5.93□□□□□ -1.46
USP17L3A6NCW0 RPL21P23-201ENST00000446654 460 ntBASIC5.93□□□□□ -1.46
USP17L3A6NCW0 AC009963.2-201ENST00000453431 138 ntBASIC5.93□□□□□ -1.46
USP17L3A6NCW0 AC104472.2-201ENST00000469035 601 ntBASIC5.93□□□□□ -1.46
USP17L3A6NCW0 AC103987.1-201ENST00000473394 348 ntBASIC5.93□□□□□ -1.46
USP17L3A6NCW0 AC015911.1-201ENST00000495111 156 ntBASIC5.93□□□□□ -1.46
USP17L3A6NCW0 AC026801.1-201ENST00000497178 464 ntBASIC5.93□□□□□ -1.46
USP17L3A6NCW0 Y_RNA.661-201ENST00000516003 99 ntBASIC5.93□□□□□ -1.46
USP17L3A6NCW0 RNU6-1332P-201ENST00000516666 104 ntBASIC5.93□□□□□ -1.46
USP17L3A6NCW0 MIR4277-201ENST00000578298 84 ntBASIC5.93□□□□□ -1.46
USP17L3A6NCW0 AL354984.3-201ENST00000604803 325 ntBASIC5.93□□□□□ -1.46
USP17L3A6NCW0 AC009229.3-201ENST00000608056 282 ntBASIC5.93□□□□□ -1.46
USP17L3A6NCW0 FAM27B-201ENST00000610601 213 ntBASIC5.93□□□□□ -1.46
USP17L3A6NCW0 AP001005.3-201ENST00000622049 129 ntBASIC5.93□□□□□ -1.46
USP17L3A6NCW0 AC243312.2-201ENST00000623340 601 ntBASIC5.93□□□□□ -1.46
USP17L3A6NCW0 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
USP17L3A6NCW0 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
USP17L3A6NCW0 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.93□□□□□ -1.46
USP17L3A6NCW0 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
USP17L3A6NCW0 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
USP17L3A6NCW0 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
USP17L3A6NCW0 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
USP17L3A6NCW0 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
USP17L3A6NCW0 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
USP17L3A6NCW0 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.92□□□□□ -1.46
USP17L3A6NCW0 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
USP17L3A6NCW0 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
USP17L3A6NCW0 MTND5P30-201ENST00000452896 1731 ntBASIC5.92□□□□□ -1.46
USP17L3A6NCW0 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.92□□□□□ -1.46
USP17L3A6NCW0 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
USP17L3A6NCW0 RNU11-201ENST00000387069 134 ntBASIC5.92□□□□□ -1.46
USP17L3A6NCW0 RNU6-907P-201ENST00000390924 102 ntBASIC5.92□□□□□ -1.46
USP17L3A6NCW0 U3.30-201ENST00000391308 210 ntBASIC5.92□□□□□ -1.46
USP17L3A6NCW0 SNORA75.6-201ENST00000391318 127 ntBASIC5.92□□□□□ -1.46
USP17L3A6NCW0 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC5.92□□□□□ -1.46
USP17L3A6NCW0 RPL23AP1-201ENST00000428990 471 ntBASIC5.92□□□□□ -1.46
USP17L3A6NCW0 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC5.92□□□□□ -1.46
USP17L3A6NCW0 AC016831.4-201ENST00000438302 307 ntBASIC5.92□□□□□ -1.46
USP17L3A6NCW0 MRPL48P1-201ENST00000445390 636 ntBASIC5.92□□□□□ -1.46
USP17L3A6NCW0 RPL12P25-201ENST00000455592 494 ntBASIC5.92□□□□□ -1.46
USP17L3A6NCW0 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.92□□□□□ -1.46
USP17L3A6NCW0 RNU6-677P-201ENST00000516914 101 ntBASIC5.92□□□□□ -1.46
USP17L3A6NCW0 RN7SKP234-201ENST00000517173 224 ntBASIC5.92□□□□□ -1.46
USP17L3A6NCW0 RNU6-323P-201ENST00000521915 107 ntBASIC5.92□□□□□ -1.46
USP17L3A6NCW0 CYCSP27-201ENST00000527643 293 ntBASIC5.92□□□□□ -1.46
USP17L3A6NCW0 TOMM20P2-201ENST00000540082 421 ntBASIC5.92□□□□□ -1.46
USP17L3A6NCW0 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.92□□□□□ -1.46
USP17L3A6NCW0 AL360012.1-201ENST00000602813 131 ntBASIC5.92□□□□□ -1.46
USP17L3A6NCW0 IGHV3-29-201ENST00000604817 344 ntBASIC5.92□□□□□ -1.46
USP17L3A6NCW0 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.92□□□□□ -1.46
USP17L3A6NCW0 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.92□□□□□ -1.46
USP17L3A6NCW0 AC090425.1-201ENST00000610007 140 ntBASIC5.92□□□□□ -1.46
USP17L3A6NCW0 U4.1-201ENST00000620349 87 ntBASIC5.92□□□□□ -1.46
USP17L3A6NCW0 Z69720.2-201ENST00000624755 279 ntBASIC5.92□□□□□ -1.46
USP17L3A6NCW0 MIR4275-201ENST00000636486 87 ntBASIC5.92□□□□□ -1.46
USP17L3A6NCW0 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC5.92□□□□□ -1.46
USP17L3A6NCW0 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
USP17L3A6NCW0 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
USP17L3A6NCW0 FAM91A3P-201ENST00000456826 2544 ntBASIC5.92□□□□□ -1.46
USP17L3A6NCW0 AC140134.1-201ENST00000511830 3544 ntBASIC5.92□□□□□ -1.46
USP17L3A6NCW0 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.92□□□□□ -1.46
USP17L3A6NCW0 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
USP17L3A6NCW0 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
USP17L3A6NCW0 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms