Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AL591473.1-201ENST00000464297 313 ntBASIC4.56□□□□□ -1.68
SHISA3A0PJX4 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SHISA3A0PJX4 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.56□□□□□ -1.68
SHISA3A0PJX4 RPL22P13-201ENST00000493291 347 ntBASIC4.56□□□□□ -1.68
SHISA3A0PJX4 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.56□□□□□ -1.68
SHISA3A0PJX4 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SHISA3A0PJX4 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC4.56□□□□□ -1.68
SHISA3A0PJX4 AP000827.1-201ENST00000527814 258 ntBASIC4.56□□□□□ -1.68
SHISA3A0PJX4 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.56□□□□□ -1.68
SHISA3A0PJX4 AC027544.3-201ENST00000535082 757 ntBASIC4.56□□□□□ -1.68
SHISA3A0PJX4 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC4.56□□□□□ -1.68
SHISA3A0PJX4 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.56□□□□□ -1.68
SHISA3A0PJX4 HMGN2P28-201ENST00000606102 262 ntBASIC4.56□□□□□ -1.68
SHISA3A0PJX4 AC002044.1-201ENST00000606707 158 ntBASIC4.56□□□□□ -1.68
SHISA3A0PJX4 AC062037.2-201ENST00000610137 73 ntBASIC4.56□□□□□ -1.68
SHISA3A0PJX4 AL021879.1-201ENST00000611756 288 ntBASIC4.56□□□□□ -1.68
SHISA3A0PJX4 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC4.56□□□□□ -1.68
SHISA3A0PJX4 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SHISA3A0PJX4 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
SHISA3A0PJX4 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
SHISA3A0PJX4 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SHISA3A0PJX4 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
SHISA3A0PJX4 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SHISA3A0PJX4 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.55□□□□□ -1.68
SHISA3A0PJX4 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
SHISA3A0PJX4 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
SHISA3A0PJX4 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SHISA3A0PJX4 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
SHISA3A0PJX4 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
SHISA3A0PJX4 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SHISA3A0PJX4 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
SHISA3A0PJX4 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SHISA3A0PJX4 RNU6-371P-201ENST00000364283 108 ntBASIC4.55□□□□□ -1.68
SHISA3A0PJX4 RNU6-1329P-201ENST00000365664 107 ntBASIC4.55□□□□□ -1.68
SHISA3A0PJX4 RHOT1P2-201ENST00000366423 333 ntBASIC4.55□□□□□ -1.68
SHISA3A0PJX4 Y_RNA.424-201ENST00000384063 103 ntBASIC4.55□□□□□ -1.68
SHISA3A0PJX4 Y_RNA.489-201ENST00000384410 101 ntBASIC4.55□□□□□ -1.68
SHISA3A0PJX4 RNA5SP122-201ENST00000384457 108 ntBASIC4.55□□□□□ -1.68
SHISA3A0PJX4 RNU6-837P-201ENST00000391056 108 ntBASIC4.55□□□□□ -1.68
SHISA3A0PJX4 RNU6-712P-201ENST00000410558 100 ntBASIC4.55□□□□□ -1.68
SHISA3A0PJX4 GNG5P5-201ENST00000420444 220 ntBASIC4.55□□□□□ -1.68
SHISA3A0PJX4 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC4.55□□□□□ -1.68
SHISA3A0PJX4 AL035660.1-201ENST00000422041 222 ntBASIC4.55□□□□□ -1.68
SHISA3A0PJX4 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC4.55□□□□□ -1.68
SHISA3A0PJX4 AL133173.1-201ENST00000423458 397 ntBASIC4.55□□□□□ -1.68
SHISA3A0PJX4 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.55□□□□□ -1.68
SHISA3A0PJX4 HMGB1P27-201ENST00000431429 603 ntBASIC4.55□□□□□ -1.68
SHISA3A0PJX4 AC073063.1-201ENST00000434352 607 ntBASIC4.55□□□□□ -1.68
SHISA3A0PJX4 RPS20P1-201ENST00000434853 354 ntBASIC4.55□□□□□ -1.68
SHISA3A0PJX4 AC104634.1-201ENST00000452720 462 ntBASIC4.55□□□□□ -1.68
SHISA3A0PJX4 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.55□□□□□ -1.68
SHISA3A0PJX4 RPS23P3-201ENST00000470993 430 ntBASIC4.55□□□□□ -1.68
SHISA3A0PJX4 AF213884.1-201ENST00000488102 463 ntBASIC4.55□□□□□ -1.68
SHISA3A0PJX4 AC007686.1-201ENST00000488511 463 ntBASIC4.55□□□□□ -1.68
SHISA3A0PJX4 MRPS33P2-201ENST00000507850 322 ntBASIC4.55□□□□□ -1.68
SHISA3A0PJX4 SNORA70.20-201ENST00000516848 126 ntBASIC4.55□□□□□ -1.68
SHISA3A0PJX4 CDH12P4-201ENST00000517835 295 ntBASIC4.55□□□□□ -1.68
SHISA3A0PJX4 CDH12P3-201ENST00000517935 295 ntBASIC4.55□□□□□ -1.68
SHISA3A0PJX4 CDH12P1-201ENST00000518435 295 ntBASIC4.55□□□□□ -1.68
SHISA3A0PJX4 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.55□□□□□ -1.68
SHISA3A0PJX4 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.55□□□□□ -1.68
SHISA3A0PJX4 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.55□□□□□ -1.68
SHISA3A0PJX4 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.55□□□□□ -1.68
SHISA3A0PJX4 Z98751.3-201ENST00000604447 521 ntBASIC4.55□□□□□ -1.68
SHISA3A0PJX4 AC020634.1-201ENST00000608701 549 ntBASIC4.55□□□□□ -1.68
SHISA3A0PJX4 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
SHISA3A0PJX4 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.55□□□□□ -1.68
SHISA3A0PJX4 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
SHISA3A0PJX4 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC4.55□□□□□ -1.68
SHISA3A0PJX4 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
SHISA3A0PJX4 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
SHISA3A0PJX4 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
SHISA3A0PJX4 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
SHISA3A0PJX4 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SHISA3A0PJX4 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
SHISA3A0PJX4 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.55□□□□□ -1.68
SHISA3A0PJX4 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SHISA3A0PJX4 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SHISA3A0PJX4 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SHISA3A0PJX4 AC091812.1-201ENST00000432235 1948 ntBASIC4.54□□□□□ -1.68
SHISA3A0PJX4 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SHISA3A0PJX4 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SHISA3A0PJX4 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC4.54□□□□□ -1.68
SHISA3A0PJX4 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
SHISA3A0PJX4 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
SHISA3A0PJX4 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SHISA3A0PJX4 PRO1804-201ENST00000623780 2050 ntBASIC4.54□□□□□ -1.68
SHISA3A0PJX4 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.54□□□□□ -1.68
SHISA3A0PJX4 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC4.54□□□□□ -1.68
SHISA3A0PJX4 RNU6-1249P-201ENST00000363237 111 ntBASIC4.54□□□□□ -1.68
SHISA3A0PJX4 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SHISA3A0PJX4 RNU6-26P-201ENST00000383985 107 ntBASIC4.54□□□□□ -1.68
SHISA3A0PJX4 RNU6-842P-201ENST00000384269 107 ntBASIC4.54□□□□□ -1.68
SHISA3A0PJX4 MIR517A-201ENST00000385001 87 ntBASIC4.54□□□□□ -1.68
SHISA3A0PJX4 GLULP6-201ENST00000399502 913 ntBASIC4.54□□□□□ -1.68
SHISA3A0PJX4 AC097374.1-203ENST00000400783 485 ntBASIC4.54□□□□□ -1.68
SHISA3A0PJX4 AL133388.1-201ENST00000404509 287 ntBASIC4.54□□□□□ -1.68
SHISA3A0PJX4 RNU4-78P-201ENST00000410940 126 ntBASIC4.54□□□□□ -1.68
SHISA3A0PJX4 AC096664.2-201ENST00000411843 406 ntBASIC4.54□□□□□ -1.68
SHISA3A0PJX4 RPL7AP73-201ENST00000413490 353 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms