Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.66□□□□□ -2.14
TRAV30A0A087WSZ9 AC025588.4-201ENST00000615802 908 ntBASIC1.66□□□□□ -2.14
TRAV30A0A087WSZ9 MIR6873-201ENST00000622788 63 ntBASIC1.66□□□□□ -2.14
TRAV30A0A087WSZ9 DUXAP9-208ENST00000622815 614 ntBASIC1.66□□□□□ -2.14
TRAV30A0A087WSZ9 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
TRAV30A0A087WSZ9 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.65□□□□□ -2.14
TRAV30A0A087WSZ9 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.14
TRAV30A0A087WSZ9 AC046144.1-201ENST00000478559 1853 ntBASIC1.65□□□□□ -2.14
TRAV30A0A087WSZ9 CR848007.1-201ENST00000442354 1699 ntBASIC1.65□□□□□ -2.15
TRAV30A0A087WSZ9 ANKRD36P1-201ENST00000344424 659 ntBASIC1.65□□□□□ -2.15
TRAV30A0A087WSZ9 RNU1-105P-201ENST00000363470 161 ntBASIC1.65□□□□□ -2.15
TRAV30A0A087WSZ9 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
TRAV30A0A087WSZ9 SUMO2P12-201ENST00000405924 140 ntBASIC1.65□□□□□ -2.15
TRAV30A0A087WSZ9 BTF3P7-201ENST00000407097 488 ntBASIC1.65□□□□□ -2.15
TRAV30A0A087WSZ9 RNA5SP80-201ENST00000410475 111 ntBASIC1.65□□□□□ -2.15
TRAV30A0A087WSZ9 HMGB1P11-201ENST00000413899 637 ntBASIC1.65□□□□□ -2.15
TRAV30A0A087WSZ9 AL135786.1-201ENST00000415892 214 ntBASIC1.65□□□□□ -2.15
TRAV30A0A087WSZ9 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC1.65□□□□□ -2.15
TRAV30A0A087WSZ9 AC009414.1-201ENST00000427200 443 ntBASIC1.65□□□□□ -2.15
TRAV30A0A087WSZ9 AL356320.1-201ENST00000429616 163 ntBASIC1.65□□□□□ -2.15
TRAV30A0A087WSZ9 RPL35AP22-201ENST00000436855 335 ntBASIC1.65□□□□□ -2.15
TRAV30A0A087WSZ9 Z99127.2-201ENST00000441426 334 ntBASIC1.65□□□□□ -2.15
TRAV30A0A087WSZ9 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.65□□□□□ -2.15
TRAV30A0A087WSZ9 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.65□□□□□ -2.15
TRAV30A0A087WSZ9 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.65□□□□□ -2.15
TRAV30A0A087WSZ9 MTCO2P9-201ENST00000503214 694 ntBASIC1.65□□□□□ -2.15
TRAV30A0A087WSZ9 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC1.65□□□□□ -2.15
TRAV30A0A087WSZ9 CCNHP1-201ENST00000513311 678 ntBASIC1.65□□□□□ -2.15
TRAV30A0A087WSZ9 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC1.65□□□□□ -2.15
TRAV30A0A087WSZ9 AC103783.1-201ENST00000520506 373 ntBASIC1.65□□□□□ -2.15
TRAV30A0A087WSZ9 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.65□□□□□ -2.15
TRAV30A0A087WSZ9 AP003122.3-201ENST00000526316 255 ntBASIC1.65□□□□□ -2.15
TRAV30A0A087WSZ9 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
TRAV30A0A087WSZ9 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.65□□□□□ -2.15
TRAV30A0A087WSZ9 AC026464.5-201ENST00000562497 722 ntBASIC1.65□□□□□ -2.15
TRAV30A0A087WSZ9 AC087481.2-201ENST00000565492 330 ntBASIC1.65□□□□□ -2.15
TRAV30A0A087WSZ9 MIR548Y-201ENST00000582739 110 ntBASIC1.65□□□□□ -2.15
TRAV30A0A087WSZ9 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC1.65□□□□□ -2.15
TRAV30A0A087WSZ9 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.15
TRAV30A0A087WSZ9 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.65□□□□□ -2.15
TRAV30A0A087WSZ9 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
TRAV30A0A087WSZ9 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
TRAV30A0A087WSZ9 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC1.64□□□□□ -2.15
TRAV30A0A087WSZ9 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
TRAV30A0A087WSZ9 RPA3-203ENST00000401447 414 ntTSL 3 BASIC1.64□□□□□ -2.15
TRAV30A0A087WSZ9 GLS-203ENST00000409215 632 ntTSL 4 BASIC1.64□□□□□ -2.15
TRAV30A0A087WSZ9 RNU4-53P-201ENST00000410828 140 ntBASIC1.64□□□□□ -2.15
TRAV30A0A087WSZ9 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.64□□□□□ -2.15
TRAV30A0A087WSZ9 AL136380.1-201ENST00000447970 162 ntBASIC1.64□□□□□ -2.15
TRAV30A0A087WSZ9 RPL23AP7-203ENST00000449021 469 ntBASIC1.64□□□□□ -2.15
TRAV30A0A087WSZ9 AL118520.1-201ENST00000450770 291 ntBASIC1.64□□□□□ -2.15
TRAV30A0A087WSZ9 AL021397.1-201ENST00000451806 248 ntBASIC1.64□□□□□ -2.15
TRAV30A0A087WSZ9 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC1.64□□□□□ -2.15
TRAV30A0A087WSZ9 CABYRP1-201ENST00000465493 1045 ntBASIC1.64□□□□□ -2.15
TRAV30A0A087WSZ9 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC1.64□□□□□ -2.15
TRAV30A0A087WSZ9 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.64□□□□□ -2.15
TRAV30A0A087WSZ9 AC104090.1-201ENST00000506341 1171 ntBASIC1.64□□□□□ -2.15
TRAV30A0A087WSZ9 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC1.64□□□□□ -2.15
TRAV30A0A087WSZ9 AC034244.2-201ENST00000514668 858 ntBASIC1.64□□□□□ -2.15
TRAV30A0A087WSZ9 RNU7-193P-201ENST00000516723 65 ntBASIC1.64□□□□□ -2.15
TRAV30A0A087WSZ9 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.64□□□□□ -2.15
TRAV30A0A087WSZ9 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.64□□□□□ -2.15
TRAV30A0A087WSZ9 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.64□□□□□ -2.15
TRAV30A0A087WSZ9 AC090897.2-201ENST00000581715 130 ntBASIC1.64□□□□□ -2.15
TRAV30A0A087WSZ9 DNAJC19P3-201ENST00000594491 331 ntBASIC1.64□□□□□ -2.15
TRAV30A0A087WSZ9 AL390838.2-201ENST00000602394 274 ntBASIC1.64□□□□□ -2.15
TRAV30A0A087WSZ9 AC092954.1-201ENST00000609121 445 ntBASIC1.64□□□□□ -2.15
TRAV30A0A087WSZ9 OR10AB1P-201ENST00000609613 938 ntBASIC1.64□□□□□ -2.15
TRAV30A0A087WSZ9 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
TRAV30A0A087WSZ9 AC025594.3-201ENST00000613068 790 ntBASIC1.64□□□□□ -2.15
TRAV30A0A087WSZ9 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.64□□□□□ -2.15
TRAV30A0A087WSZ9 AC243829.7-201ENST00000633081 225 ntBASIC1.64□□□□□ -2.15
TRAV30A0A087WSZ9 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
TRAV30A0A087WSZ9 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
TRAV30A0A087WSZ9 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
TRAV30A0A087WSZ9 AL359893.1-201ENST00000447628 1580 ntBASIC1.64□□□□□ -2.15
TRAV30A0A087WSZ9 RNU5D-1-201ENST00000363299 116 ntBASIC1.63□□□□□ -2.15
TRAV30A0A087WSZ9 TANK-206ENST00000406287 875 ntTSL 5 BASIC1.63□□□□□ -2.15
TRAV30A0A087WSZ9 OR4K6P-201ENST00000416478 897 ntBASIC1.63□□□□□ -2.15
TRAV30A0A087WSZ9 TRBV24OR9-2-201ENST00000416632 435 ntBASIC1.63□□□□□ -2.15
TRAV30A0A087WSZ9 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.63□□□□□ -2.15
TRAV30A0A087WSZ9 TRGVB-201ENST00000453257 471 ntBASIC1.63□□□□□ -2.15
TRAV30A0A087WSZ9 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.63□□□□□ -2.15
TRAV30A0A087WSZ9 RPL23AP41-201ENST00000484754 458 ntBASIC1.63□□□□□ -2.15
TRAV30A0A087WSZ9 OR4G11P-201ENST00000492842 939 ntBASIC1.63□□□□□ -2.15
TRAV30A0A087WSZ9 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC1.63□□□□□ -2.15
TRAV30A0A087WSZ9 RN7SKP283-201ENST00000517197 270 ntBASIC1.63□□□□□ -2.15
TRAV30A0A087WSZ9 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.63□□□□□ -2.15
TRAV30A0A087WSZ9 MIR3122-201ENST00000577243 73 ntBASIC1.63□□□□□ -2.15
TRAV30A0A087WSZ9 AC090666.1-201ENST00000578241 445 ntBASIC1.63□□□□□ -2.15
TRAV30A0A087WSZ9 MIR5002-201ENST00000584713 97 ntBASIC1.63□□□□□ -2.15
TRAV30A0A087WSZ9 OR4G1P-201ENST00000588632 938 ntBASIC1.63□□□□□ -2.15
TRAV30A0A087WSZ9 AP001330.4-201ENST00000604350 154 ntBASIC1.63□□□□□ -2.15
TRAV30A0A087WSZ9 AC120053.1-201ENST00000607706 736 ntBASIC1.63□□□□□ -2.15
TRAV30A0A087WSZ9 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC1.63□□□□□ -2.15
TRAV30A0A087WSZ9 AL627230.6-201ENST00000611129 280 ntBASIC1.63□□□□□ -2.15
TRAV30A0A087WSZ9 AC087359.1-201ENST00000508335 1740 ntBASIC1.63□□□□□ -2.15
TRAV30A0A087WSZ9 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.63□□□□□ -2.15
TRAV30A0A087WSZ9 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.62□□□□□ -2.15
TRAV30A0A087WSZ9 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms