Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PCDHB3Q9Y5E6 SNORA51.9-201ENST00000384295 124 ntBASIC5.96□□□□□ -1.46
PCDHB3Q9Y5E6 RNU6-1289P-201ENST00000384431 106 ntBASIC5.96□□□□□ -1.46
PCDHB3Q9Y5E6 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
PCDHB3Q9Y5E6 RNU4-30P-201ENST00000410245 143 ntBASIC5.96□□□□□ -1.46
PCDHB3Q9Y5E6 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.96□□□□□ -1.46
PCDHB3Q9Y5E6 AF186996.5-201ENST00000418098 904 ntBASIC5.96□□□□□ -1.46
PCDHB3Q9Y5E6 RPS3P2-201ENST00000421346 701 ntBASIC5.96□□□□□ -1.46
PCDHB3Q9Y5E6 USP9YP7-201ENST00000436723 430 ntBASIC5.96□□□□□ -1.46
PCDHB3Q9Y5E6 AC005002.2-201ENST00000438228 269 ntBASIC5.96□□□□□ -1.46
PCDHB3Q9Y5E6 USP9YP32-201ENST00000452432 430 ntBASIC5.96□□□□□ -1.46
PCDHB3Q9Y5E6 PPIAP7-201ENST00000454070 489 ntBASIC5.96□□□□□ -1.46
PCDHB3Q9Y5E6 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PCDHB3Q9Y5E6 VPS25P1-201ENST00000455691 508 ntBASIC5.96□□□□□ -1.46
PCDHB3Q9Y5E6 SNORD2.1-201ENST00000458762 69 ntBASIC5.96□□□□□ -1.46
PCDHB3Q9Y5E6 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC5.96□□□□□ -1.46
PCDHB3Q9Y5E6 AP001025.1-201ENST00000486139 332 ntBASIC5.96□□□□□ -1.46
PCDHB3Q9Y5E6 RPS27AP13-201ENST00000498403 237 ntBASIC5.96□□□□□ -1.46
PCDHB3Q9Y5E6 AC090958.1-201ENST00000511122 351 ntBASIC5.96□□□□□ -1.46
PCDHB3Q9Y5E6 RN7SKP35-201ENST00000517210 151 ntBASIC5.96□□□□□ -1.46
PCDHB3Q9Y5E6 AP000620.1-201ENST00000527147 504 ntBASIC5.96□□□□□ -1.46
PCDHB3Q9Y5E6 EIF4A2P5-201ENST00000529914 499 ntBASIC5.96□□□□□ -1.46
PCDHB3Q9Y5E6 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.96□□□□□ -1.46
PCDHB3Q9Y5E6 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC5.96□□□□□ -1.46
PCDHB3Q9Y5E6 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.96□□□□□ -1.46
PCDHB3Q9Y5E6 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.96□□□□□ -1.46
PCDHB3Q9Y5E6 AC073349.3-201ENST00000617616 186 ntBASIC5.96□□□□□ -1.46
PCDHB3Q9Y5E6 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC5.96□□□□□ -1.46
PCDHB3Q9Y5E6 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PCDHB3Q9Y5E6 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PCDHB3Q9Y5E6 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
PCDHB3Q9Y5E6 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PCDHB3Q9Y5E6 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.96□□□□□ -1.46
PCDHB3Q9Y5E6 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
PCDHB3Q9Y5E6 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
PCDHB3Q9Y5E6 OR4G2P-202ENST00000641004 1759 ntBASIC5.95□□□□□ -1.46
PCDHB3Q9Y5E6 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PCDHB3Q9Y5E6 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
PCDHB3Q9Y5E6 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PCDHB3Q9Y5E6 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PCDHB3Q9Y5E6 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
PCDHB3Q9Y5E6 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PCDHB3Q9Y5E6 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PCDHB3Q9Y5E6 RNU6-514P-201ENST00000384208 107 ntBASIC5.95□□□□□ -1.46
PCDHB3Q9Y5E6 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
PCDHB3Q9Y5E6 HSPA8P15-201ENST00000401676 786 ntBASIC5.95□□□□□ -1.46
PCDHB3Q9Y5E6 RN7SKP206-201ENST00000410823 293 ntBASIC5.95□□□□□ -1.46
PCDHB3Q9Y5E6 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.95□□□□□ -1.46
PCDHB3Q9Y5E6 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.95□□□□□ -1.46
PCDHB3Q9Y5E6 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.95□□□□□ -1.46
PCDHB3Q9Y5E6 HIGD1AP2-201ENST00000446367 280 ntBASIC5.95□□□□□ -1.46
PCDHB3Q9Y5E6 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.95□□□□□ -1.46
PCDHB3Q9Y5E6 AC010683.1-201ENST00000473673 378 ntBASIC5.95□□□□□ -1.46
PCDHB3Q9Y5E6 AC025458.1-201ENST00000506046 166 ntBASIC5.95□□□□□ -1.46
PCDHB3Q9Y5E6 MRPS33P2-201ENST00000507850 322 ntBASIC5.95□□□□□ -1.46
PCDHB3Q9Y5E6 RNU7-175P-201ENST00000515915 61 ntBASIC5.95□□□□□ -1.46
PCDHB3Q9Y5E6 IGKV3D-25-201ENST00000519599 235 ntBASIC5.95□□□□□ -1.46
PCDHB3Q9Y5E6 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.95□□□□□ -1.46
PCDHB3Q9Y5E6 AC233702.2-202ENST00000562547 291 ntBASIC5.95□□□□□ -1.46
PCDHB3Q9Y5E6 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.95□□□□□ -1.46
PCDHB3Q9Y5E6 AC090617.3-201ENST00000573670 475 ntBASIC5.95□□□□□ -1.46
PCDHB3Q9Y5E6 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.95□□□□□ -1.46
PCDHB3Q9Y5E6 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
PCDHB3Q9Y5E6 AC100778.3-201ENST00000580060 1750 ntBASIC5.95□□□□□ -1.46
PCDHB3Q9Y5E6 IQCB2P-201ENST00000401788 1633 ntBASIC5.95□□□□□ -1.46
PCDHB3Q9Y5E6 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
PCDHB3Q9Y5E6 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PCDHB3Q9Y5E6 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PCDHB3Q9Y5E6 AC024587.1-201ENST00000505925 2157 ntBASIC5.94□□□□□ -1.46
PCDHB3Q9Y5E6 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.94□□□□□ -1.46
PCDHB3Q9Y5E6 AC022164.1-201ENST00000568767 2673 ntBASIC5.94□□□□□ -1.46
PCDHB3Q9Y5E6 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.94□□□□□ -1.46
PCDHB3Q9Y5E6 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCDHB3Q9Y5E6 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC5.94□□□□□ -1.46
PCDHB3Q9Y5E6 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PCDHB3Q9Y5E6 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PCDHB3Q9Y5E6 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
PCDHB3Q9Y5E6 AL445487.1-201ENST00000415694 1580 ntBASIC5.94□□□□□ -1.46
PCDHB3Q9Y5E6 AP001541.1-201ENST00000623322 1904 ntBASIC5.94□□□□□ -1.46
PCDHB3Q9Y5E6 RNU1-49P-201ENST00000363468 159 ntBASIC5.94□□□□□ -1.46
PCDHB3Q9Y5E6 RNU6-827P-201ENST00000365553 106 ntBASIC5.94□□□□□ -1.46
PCDHB3Q9Y5E6 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PCDHB3Q9Y5E6 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCDHB3Q9Y5E6 RNU6-339P-201ENST00000384310 107 ntBASIC5.94□□□□□ -1.46
PCDHB3Q9Y5E6 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.94□□□□□ -1.46
PCDHB3Q9Y5E6 DPPA2P3-201ENST00000411853 655 ntBASIC5.94□□□□□ -1.46
PCDHB3Q9Y5E6 AC079809.1-201ENST00000415468 276 ntBASIC5.94□□□□□ -1.46
PCDHB3Q9Y5E6 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.94□□□□□ -1.46
PCDHB3Q9Y5E6 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.94□□□□□ -1.46
PCDHB3Q9Y5E6 AL596266.1-201ENST00000448132 400 ntBASIC5.94□□□□□ -1.46
PCDHB3Q9Y5E6 AC022431.1-201ENST00000450941 438 ntBASIC5.94□□□□□ -1.46
PCDHB3Q9Y5E6 AC007395.1-201ENST00000451333 677 ntBASIC5.94□□□□□ -1.46
PCDHB3Q9Y5E6 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC5.94□□□□□ -1.46
PCDHB3Q9Y5E6 RPS26P21-201ENST00000475397 348 ntBASIC5.94□□□□□ -1.46
PCDHB3Q9Y5E6 AC091959.1-201ENST00000495857 238 ntBASIC5.94□□□□□ -1.46
PCDHB3Q9Y5E6 AC093815.1-201ENST00000508637 280 ntBASIC5.94□□□□□ -1.46
PCDHB3Q9Y5E6 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.94□□□□□ -1.46
PCDHB3Q9Y5E6 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.94□□□□□ -1.46
PCDHB3Q9Y5E6 RNA5SP272-201ENST00000516095 111 ntBASIC5.94□□□□□ -1.46
PCDHB3Q9Y5E6 MIR892C-201ENST00000516410 77 ntBASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms