Protein–RNA interactions for Protein: Q9Y3E7

CHMP3, Charged multivesicular body protein 3, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3Q9Y3E7 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC6.01□□□□□ -1.45
CHMP3Q9Y3E7 AL133153.1-201ENST00000557756 303 ntBASIC6.01□□□□□ -1.45
CHMP3Q9Y3E7 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC6.01□□□□□ -1.45
CHMP3Q9Y3E7 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC6.01□□□□□ -1.45
CHMP3Q9Y3E7 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC6.01□□□□□ -1.45
CHMP3Q9Y3E7 AL669831.4-202ENST00000590817 238 ntBASIC6.01□□□□□ -1.45
CHMP3Q9Y3E7 AC025588.3-201ENST00000604182 274 ntBASIC6.01□□□□□ -1.45
CHMP3Q9Y3E7 NUTF2P8-201ENST00000604593 363 ntBASIC6.01□□□□□ -1.45
CHMP3Q9Y3E7 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC6.01□□□□□ -1.45
CHMP3Q9Y3E7 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CHMP3Q9Y3E7 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
CHMP3Q9Y3E7 ZNF807-201ENST00000328088 1707 ntBASIC6.01□□□□□ -1.45
CHMP3Q9Y3E7 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CHMP3Q9Y3E7 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CHMP3Q9Y3E7 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CHMP3Q9Y3E7 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CHMP3Q9Y3E7 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC6.01□□□□□ -1.45
CHMP3Q9Y3E7 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
CHMP3Q9Y3E7 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC6□□□□□ -1.45
CHMP3Q9Y3E7 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CHMP3Q9Y3E7 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC6□□□□□ -1.45
CHMP3Q9Y3E7 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC6□□□□□ -1.45
CHMP3Q9Y3E7 Y_RNA.212-201ENST00000364177 102 ntBASIC6□□□□□ -1.45
CHMP3Q9Y3E7 RNU6-61P-201ENST00000365528 109 ntBASIC6□□□□□ -1.45
CHMP3Q9Y3E7 RNU6-1032P-201ENST00000384100 107 ntBASIC6□□□□□ -1.45
CHMP3Q9Y3E7 Y_RNA.482-201ENST00000384377 111 ntBASIC6□□□□□ -1.45
CHMP3Q9Y3E7 HMGB3P2-201ENST00000411913 584 ntBASIC6□□□□□ -1.45
CHMP3Q9Y3E7 AC119751.6-201ENST00000416712 186 ntBASIC6□□□□□ -1.45
CHMP3Q9Y3E7 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC6□□□□□ -1.45
CHMP3Q9Y3E7 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC6□□□□□ -1.45
CHMP3Q9Y3E7 AC011753.3-201ENST00000443436 406 ntBASIC6□□□□□ -1.45
CHMP3Q9Y3E7 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC6□□□□□ -1.45
CHMP3Q9Y3E7 RPS5P7-201ENST00000456664 608 ntBASIC6□□□□□ -1.45
CHMP3Q9Y3E7 SNORD121B-201ENST00000458838 81 ntBASIC6□□□□□ -1.45
CHMP3Q9Y3E7 RNU6-976P-201ENST00000516086 111 ntBASIC6□□□□□ -1.45
CHMP3Q9Y3E7 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC6□□□□□ -1.45
CHMP3Q9Y3E7 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC6□□□□□ -1.45
CHMP3Q9Y3E7 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC6□□□□□ -1.45
CHMP3Q9Y3E7 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC6□□□□□ -1.45
CHMP3Q9Y3E7 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC6□□□□□ -1.45
CHMP3Q9Y3E7 SULT1C2P2-201ENST00000562517 294 ntBASIC6□□□□□ -1.45
CHMP3Q9Y3E7 AC009852.2-201ENST00000567898 485 ntBASIC6□□□□□ -1.45
CHMP3Q9Y3E7 AC010653.1-201ENST00000571108 881 ntBASIC6□□□□□ -1.45
CHMP3Q9Y3E7 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC6□□□□□ -1.45
CHMP3Q9Y3E7 AC023043.2-201ENST00000589678 1026 ntBASIC6□□□□□ -1.45
CHMP3Q9Y3E7 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC6□□□□□ -1.45
CHMP3Q9Y3E7 AL121932.1-201ENST00000605542 214 ntBASIC6□□□□□ -1.45
CHMP3Q9Y3E7 MIR6780A-201ENST00000615089 68 ntBASIC6□□□□□ -1.45
CHMP3Q9Y3E7 AP001486.3-201ENST00000615334 372 ntBASIC6□□□□□ -1.45
CHMP3Q9Y3E7 U4.1-201ENST00000620349 87 ntBASIC6□□□□□ -1.45
CHMP3Q9Y3E7 AL669831.3-213ENST00000636676 183 ntBASIC6□□□□□ -1.45
CHMP3Q9Y3E7 AC008013.2-202ENST00000637965 364 ntBASIC6□□□□□ -1.45
CHMP3Q9Y3E7 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
CHMP3Q9Y3E7 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC6□□□□□ -1.45
CHMP3Q9Y3E7 AC100778.3-201ENST00000580060 1750 ntBASIC6□□□□□ -1.45
CHMP3Q9Y3E7 DPY19L2P2-203ENST00000435536 1858 ntBASIC6□□□□□ -1.45
CHMP3Q9Y3E7 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CHMP3Q9Y3E7 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CHMP3Q9Y3E7 AC010266.2-201ENST00000564741 3255 ntBASIC6□□□□□ -1.45
CHMP3Q9Y3E7 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
CHMP3Q9Y3E7 AC093591.2-201ENST00000565254 3843 ntBASIC5.99□□□□□ -1.45
CHMP3Q9Y3E7 AC092079.1-201ENST00000558620 1985 ntBASIC5.99□□□□□ -1.45
CHMP3Q9Y3E7 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CHMP3Q9Y3E7 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.99□□□□□ -1.45
CHMP3Q9Y3E7 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
CHMP3Q9Y3E7 API5P2-201ENST00000397055 1498 ntBASIC5.99□□□□□ -1.45
CHMP3Q9Y3E7 RNU6-1040P-201ENST00000383974 107 ntBASIC5.99□□□□□ -1.45
CHMP3Q9Y3E7 RNU6-1222P-201ENST00000384615 107 ntBASIC5.99□□□□□ -1.45
CHMP3Q9Y3E7 AL049697.2-201ENST00000403708 294 ntBASIC5.99□□□□□ -1.45
CHMP3Q9Y3E7 HMGN1P24-201ENST00000412282 298 ntBASIC5.99□□□□□ -1.45
CHMP3Q9Y3E7 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.99□□□□□ -1.45
CHMP3Q9Y3E7 AL358176.3-201ENST00000420757 454 ntBASIC5.99□□□□□ -1.45
CHMP3Q9Y3E7 AC245028.1-201ENST00000423259 256 ntBASIC5.99□□□□□ -1.45
CHMP3Q9Y3E7 AC018865.2-201ENST00000423631 129 ntBASIC5.99□□□□□ -1.45
CHMP3Q9Y3E7 RPS17P8-201ENST00000434525 335 ntBASIC5.99□□□□□ -1.45
CHMP3Q9Y3E7 AF228730.2-201ENST00000438784 848 ntBASIC5.99□□□□□ -1.45
CHMP3Q9Y3E7 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.99□□□□□ -1.45
CHMP3Q9Y3E7 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC5.99□□□□□ -1.45
CHMP3Q9Y3E7 RPL12P25-201ENST00000455592 494 ntBASIC5.99□□□□□ -1.45
CHMP3Q9Y3E7 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC5.99□□□□□ -1.45
CHMP3Q9Y3E7 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.99□□□□□ -1.45
CHMP3Q9Y3E7 RNU7-59P-201ENST00000459101 61 ntBASIC5.99□□□□□ -1.45
CHMP3Q9Y3E7 AC079804.1-201ENST00000461922 436 ntBASIC5.99□□□□□ -1.45
CHMP3Q9Y3E7 RN7SL809P-201ENST00000482040 297 ntBASIC5.99□□□□□ -1.45
CHMP3Q9Y3E7 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC5.99□□□□□ -1.45
CHMP3Q9Y3E7 snoU109.6-201ENST00000516831 118 ntBASIC5.99□□□□□ -1.45
CHMP3Q9Y3E7 RNU6-709P-201ENST00000517257 104 ntBASIC5.99□□□□□ -1.45
CHMP3Q9Y3E7 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.99□□□□□ -1.45
CHMP3Q9Y3E7 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.99□□□□□ -1.45
CHMP3Q9Y3E7 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC5.99□□□□□ -1.45
CHMP3Q9Y3E7 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC5.99□□□□□ -1.45
CHMP3Q9Y3E7 AC093249.4-201ENST00000564755 259 ntBASIC5.99□□□□□ -1.45
CHMP3Q9Y3E7 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.99□□□□□ -1.45
CHMP3Q9Y3E7 AC069061.3-201ENST00000582254 823 ntBASIC5.99□□□□□ -1.45
CHMP3Q9Y3E7 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC5.99□□□□□ -1.45
CHMP3Q9Y3E7 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC5.99□□□□□ -1.45
CHMP3Q9Y3E7 AC008745.1-201ENST00000604064 271 ntBASIC5.99□□□□□ -1.45
CHMP3Q9Y3E7 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.99□□□□□ -1.45
CHMP3Q9Y3E7 AC098657.3-201ENST00000620434 263 ntBASIC5.99□□□□□ -1.45
CHMP3Q9Y3E7 AL357559.1-201ENST00000622228 274 ntBASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms