Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC1.59□□□□□ -2.15
VPS25Q9BRG1 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC1.59□□□□□ -2.16
VPS25Q9BRG1 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC1.59□□□□□ -2.16
VPS25Q9BRG1 CPD-202ENST00000543464 4007 ntTSL 2 BASIC1.58□□□□□ -2.16
VPS25Q9BRG1 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
VPS25Q9BRG1 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC1.58□□□□□ -2.16
VPS25Q9BRG1 FTLP6-201ENST00000355274 422 ntBASIC1.58□□□□□ -2.16
VPS25Q9BRG1 MIR490-201ENST00000384865 128 ntBASIC1.58□□□□□ -2.16
VPS25Q9BRG1 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
VPS25Q9BRG1 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.58□□□□□ -2.16
VPS25Q9BRG1 AC245052.5-201ENST00000416320 649 ntBASIC1.58□□□□□ -2.16
VPS25Q9BRG1 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.58□□□□□ -2.16
VPS25Q9BRG1 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC1.58□□□□□ -2.16
VPS25Q9BRG1 HMGN2P31-201ENST00000432430 273 ntBASIC1.58□□□□□ -2.16
VPS25Q9BRG1 AL353689.1-201ENST00000438895 199 ntBASIC1.58□□□□□ -2.16
VPS25Q9BRG1 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC1.58□□□□□ -2.16
VPS25Q9BRG1 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC1.58□□□□□ -2.16
VPS25Q9BRG1 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC1.58□□□□□ -2.16
VPS25Q9BRG1 AC008280.2-201ENST00000455473 307 ntBASIC1.58□□□□□ -2.16
VPS25Q9BRG1 CDC42P1-201ENST00000456658 548 ntBASIC1.58□□□□□ -2.16
VPS25Q9BRG1 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC1.58□□□□□ -2.16
VPS25Q9BRG1 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
VPS25Q9BRG1 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.58□□□□□ -2.16
VPS25Q9BRG1 AC091965.2-201ENST00000512324 613 ntBASIC1.58□□□□□ -2.16
VPS25Q9BRG1 HMGN1P15-201ENST00000513870 295 ntBASIC1.58□□□□□ -2.16
VPS25Q9BRG1 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.58□□□□□ -2.16
VPS25Q9BRG1 AC025857.1-201ENST00000525252 377 ntBASIC1.58□□□□□ -2.16
VPS25Q9BRG1 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
VPS25Q9BRG1 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
VPS25Q9BRG1 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.58□□□□□ -2.16
VPS25Q9BRG1 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.58□□□□□ -2.16
VPS25Q9BRG1 GTF2IP8-201ENST00000560687 584 ntBASIC1.58□□□□□ -2.16
VPS25Q9BRG1 CYCSP39-201ENST00000565821 309 ntBASIC1.58□□□□□ -2.16
VPS25Q9BRG1 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
VPS25Q9BRG1 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC1.58□□□□□ -2.16
VPS25Q9BRG1 RN7SL753P-201ENST00000581238 290 ntBASIC1.58□□□□□ -2.16
VPS25Q9BRG1 AL606834.2-201ENST00000602954 668 ntBASIC1.58□□□□□ -2.16
VPS25Q9BRG1 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC1.58□□□□□ -2.16
VPS25Q9BRG1 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC1.58□□□□□ -2.16
VPS25Q9BRG1 AC073308.1-201ENST00000623696 305 ntBASIC1.58□□□□□ -2.16
VPS25Q9BRG1 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC1.58□□□□□ -2.16
VPS25Q9BRG1 AC068620.4-201ENST00000636730 1182 ntBASIC1.58□□□□□ -2.16
VPS25Q9BRG1 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
VPS25Q9BRG1 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.58□□□□□ -2.16
VPS25Q9BRG1 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
VPS25Q9BRG1 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.57□□□□□ -2.16
VPS25Q9BRG1 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.57□□□□□ -2.16
VPS25Q9BRG1 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC1.57□□□□□ -2.16
VPS25Q9BRG1 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC1.57□□□□□ -2.16
VPS25Q9BRG1 RNU1-148P-201ENST00000384472 162 ntBASIC1.57□□□□□ -2.16
VPS25Q9BRG1 RPS20P15-201ENST00000412792 311 ntBASIC1.57□□□□□ -2.16
VPS25Q9BRG1 USP9YP20-201ENST00000419224 558 ntBASIC1.57□□□□□ -2.16
VPS25Q9BRG1 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC1.57□□□□□ -2.16
VPS25Q9BRG1 ANKRD30BP3-201ENST00000444850 1070 ntBASIC1.57□□□□□ -2.16
VPS25Q9BRG1 TPT1P14-201ENST00000448018 505 ntBASIC1.57□□□□□ -2.16
VPS25Q9BRG1 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC1.57□□□□□ -2.16
VPS25Q9BRG1 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC1.57□□□□□ -2.16
VPS25Q9BRG1 RN7SL504P-201ENST00000494496 287 ntBASIC1.57□□□□□ -2.16
VPS25Q9BRG1 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC1.57□□□□□ -2.16
VPS25Q9BRG1 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.57□□□□□ -2.16
VPS25Q9BRG1 SNORA31.13-201ENST00000516624 135 ntBASIC1.57□□□□□ -2.16
VPS25Q9BRG1 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC1.57□□□□□ -2.16
VPS25Q9BRG1 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC1.57□□□□□ -2.16
VPS25Q9BRG1 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC1.57□□□□□ -2.16
VPS25Q9BRG1 CBX3P4-201ENST00000538909 354 ntBASIC1.57□□□□□ -2.16
VPS25Q9BRG1 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC1.57□□□□□ -2.16
VPS25Q9BRG1 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.57□□□□□ -2.16
VPS25Q9BRG1 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.57□□□□□ -2.16
VPS25Q9BRG1 MIR4299-201ENST00000577899 72 ntBASIC1.57□□□□□ -2.16
VPS25Q9BRG1 MIR4529-201ENST00000578110 78 ntBASIC1.57□□□□□ -2.16
VPS25Q9BRG1 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC1.57□□□□□ -2.16
VPS25Q9BRG1 AC106052.1-201ENST00000608029 497 ntBASIC1.57□□□□□ -2.16
VPS25Q9BRG1 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC1.57□□□□□ -2.16
VPS25Q9BRG1 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.57□□□□□ -2.16
VPS25Q9BRG1 OR1S1-201ENST00000624470 978 ntBASIC1.57□□□□□ -2.16
VPS25Q9BRG1 AP003400.5-201ENST00000624827 617 ntBASIC1.57□□□□□ -2.16
VPS25Q9BRG1 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
VPS25Q9BRG1 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC1.56□□□□□ -2.16
VPS25Q9BRG1 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC1.56□□□□□ -2.16
VPS25Q9BRG1 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
VPS25Q9BRG1 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
VPS25Q9BRG1 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC1.56□□□□□ -2.16
VPS25Q9BRG1 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC1.56□□□□□ -2.16
VPS25Q9BRG1 SNORA51.12-201ENST00000384448 134 ntBASIC1.56□□□□□ -2.16
VPS25Q9BRG1 RNU6-851P-201ENST00000384565 107 ntBASIC1.56□□□□□ -2.16
VPS25Q9BRG1 SNORA41-201ENST00000384675 132 ntBASIC1.56□□□□□ -2.16
VPS25Q9BRG1 MIR147B-201ENST00000390185 80 ntBASIC1.56□□□□□ -2.16
VPS25Q9BRG1 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC1.56□□□□□ -2.16
VPS25Q9BRG1 PGBD4P6-201ENST00000421501 610 ntBASIC1.56□□□□□ -2.16
VPS25Q9BRG1 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC1.56□□□□□ -2.16
VPS25Q9BRG1 AC091390.3-201ENST00000426478 338 ntBASIC1.56□□□□□ -2.16
VPS25Q9BRG1 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.56□□□□□ -2.16
VPS25Q9BRG1 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC1.56□□□□□ -2.16
VPS25Q9BRG1 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC1.56□□□□□ -2.16
VPS25Q9BRG1 RAB6C-AS1-202ENST00000433431 123 ntBASIC1.56□□□□□ -2.16
VPS25Q9BRG1 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC1.56□□□□□ -2.16
VPS25Q9BRG1 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC1.56□□□□□ -2.16
VPS25Q9BRG1 snoU109.1-201ENST00000459339 135 ntBASIC1.56□□□□□ -2.16
VPS25Q9BRG1 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.56□□□□□ -2.16
VPS25Q9BRG1 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms