Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC060766.3-201ENST00000591442 263 ntBASIC5.66□□□□□ -1.5
USB1Q9BQ65 SMIM12P1-201ENST00000603004 274 ntBASIC5.66□□□□□ -1.5
USB1Q9BQ65 AC005046.1-201ENST00000608515 625 ntBASIC5.66□□□□□ -1.5
USB1Q9BQ65 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.66□□□□□ -1.5
USB1Q9BQ65 AL132640.3-201ENST00000630473 177 ntBASIC5.66□□□□□ -1.5
USB1Q9BQ65 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.66□□□□□ -1.5
USB1Q9BQ65 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
USB1Q9BQ65 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
USB1Q9BQ65 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
USB1Q9BQ65 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
USB1Q9BQ65 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
USB1Q9BQ65 AC144833.1-201ENST00000567953 4089 ntBASIC5.66□□□□□ -1.5
USB1Q9BQ65 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
USB1Q9BQ65 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
USB1Q9BQ65 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
USB1Q9BQ65 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
USB1Q9BQ65 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.5
USB1Q9BQ65 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.5
USB1Q9BQ65 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
USB1Q9BQ65 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
USB1Q9BQ65 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
USB1Q9BQ65 FAM91A3P-201ENST00000456826 2544 ntBASIC5.65□□□□□ -1.5
USB1Q9BQ65 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.65□□□□□ -1.5
USB1Q9BQ65 RNU6-428P-201ENST00000362942 107 ntBASIC5.65□□□□□ -1.5
USB1Q9BQ65 SNORD14B-201ENST00000364533 90 ntBASIC5.65□□□□□ -1.5
USB1Q9BQ65 RNU6-1130P-201ENST00000365434 107 ntBASIC5.65□□□□□ -1.5
USB1Q9BQ65 RN7SKP269-201ENST00000365545 319 ntBASIC5.65□□□□□ -1.5
USB1Q9BQ65 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC5.65□□□□□ -1.5
USB1Q9BQ65 Y_RNA.580-201ENST00000391004 95 ntBASIC5.65□□□□□ -1.5
USB1Q9BQ65 SNORA11.5-201ENST00000408163 128 ntBASIC5.65□□□□□ -1.5
USB1Q9BQ65 RNU5A-5P-201ENST00000411054 116 ntBASIC5.65□□□□□ -1.5
USB1Q9BQ65 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
USB1Q9BQ65 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC5.65□□□□□ -1.5
USB1Q9BQ65 AC016700.2-201ENST00000446011 156 ntBASIC5.65□□□□□ -1.5
USB1Q9BQ65 RN7SL254P-201ENST00000460609 284 ntBASIC5.65□□□□□ -1.5
USB1Q9BQ65 AP001025.1-201ENST00000486139 332 ntBASIC5.65□□□□□ -1.5
USB1Q9BQ65 AC104164.2-201ENST00000496953 495 ntBASIC5.65□□□□□ -1.5
USB1Q9BQ65 HMGN1P16-201ENST00000508308 283 ntBASIC5.65□□□□□ -1.5
USB1Q9BQ65 AC010343.2-201ENST00000510162 224 ntBASIC5.65□□□□□ -1.5
USB1Q9BQ65 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC5.65□□□□□ -1.5
USB1Q9BQ65 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.65□□□□□ -1.5
USB1Q9BQ65 AL133399.1-201ENST00000527476 298 ntBASIC5.65□□□□□ -1.5
USB1Q9BQ65 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC5.65□□□□□ -1.5
USB1Q9BQ65 MIR4308-201ENST00000580634 81 ntBASIC5.65□□□□□ -1.5
USB1Q9BQ65 NPIPB1P-202ENST00000588786 828 ntBASIC5.65□□□□□ -1.5
USB1Q9BQ65 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.65□□□□□ -1.5
USB1Q9BQ65 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.65□□□□□ -1.5
USB1Q9BQ65 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC5.65□□□□□ -1.5
USB1Q9BQ65 uc_338.29-201ENST00000615099 168 ntBASIC5.65□□□□□ -1.5
USB1Q9BQ65 AP002512.4-202ENST00000641599 4530 ntBASIC5.65□□□□□ -1.51
USB1Q9BQ65 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.65□□□□□ -1.51
USB1Q9BQ65 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
USB1Q9BQ65 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
USB1Q9BQ65 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
USB1Q9BQ65 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.65□□□□□ -1.51
USB1Q9BQ65 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
USB1Q9BQ65 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.65□□□□□ -1.51
USB1Q9BQ65 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
USB1Q9BQ65 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.51
USB1Q9BQ65 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
USB1Q9BQ65 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
USB1Q9BQ65 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
USB1Q9BQ65 AL672167.1-205ENST00000641112 3080 ntBASIC5.64□□□□□ -1.51
USB1Q9BQ65 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
USB1Q9BQ65 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
USB1Q9BQ65 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC5.64□□□□□ -1.51
USB1Q9BQ65 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
USB1Q9BQ65 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
USB1Q9BQ65 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
USB1Q9BQ65 UBE2WP1-201ENST00000362030 340 ntBASIC5.64□□□□□ -1.51
USB1Q9BQ65 RNU5A-1-201ENST00000362698 116 ntBASIC5.64□□□□□ -1.51
USB1Q9BQ65 RNU6-1167P-201ENST00000363227 94 ntBASIC5.64□□□□□ -1.51
USB1Q9BQ65 RNU4-9P-201ENST00000364951 139 ntBASIC5.64□□□□□ -1.51
USB1Q9BQ65 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
USB1Q9BQ65 RNU6-1289P-201ENST00000384431 106 ntBASIC5.64□□□□□ -1.51
USB1Q9BQ65 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
USB1Q9BQ65 RNU6-131P-201ENST00000391144 107 ntBASIC5.64□□□□□ -1.51
USB1Q9BQ65 AL022722.2-201ENST00000402519 180 ntBASIC5.64□□□□□ -1.51
USB1Q9BQ65 SAGE2P-201ENST00000420011 2126 ntBASIC5.64□□□□□ -1.51
USB1Q9BQ65 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.64□□□□□ -1.51
USB1Q9BQ65 AC099677.3-201ENST00000427081 395 ntBASIC5.64□□□□□ -1.51
USB1Q9BQ65 AC007395.1-201ENST00000451333 677 ntBASIC5.64□□□□□ -1.51
USB1Q9BQ65 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.64□□□□□ -1.51
USB1Q9BQ65 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.64□□□□□ -1.51
USB1Q9BQ65 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.64□□□□□ -1.51
USB1Q9BQ65 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.64□□□□□ -1.51
USB1Q9BQ65 RNU7-110P-201ENST00000516891 62 ntBASIC5.64□□□□□ -1.51
USB1Q9BQ65 IGKV1D-22-201ENST00000518953 324 ntBASIC5.64□□□□□ -1.51
USB1Q9BQ65 AC084851.1-201ENST00000529105 249 ntBASIC5.64□□□□□ -1.51
USB1Q9BQ65 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.64□□□□□ -1.51
USB1Q9BQ65 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC5.64□□□□□ -1.51
USB1Q9BQ65 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.64□□□□□ -1.51
USB1Q9BQ65 AC141002.1-201ENST00000607025 279 ntBASIC5.64□□□□□ -1.51
USB1Q9BQ65 uc_338.31-201ENST00000615595 186 ntBASIC5.64□□□□□ -1.51
USB1Q9BQ65 AC073349.3-201ENST00000617616 186 ntBASIC5.64□□□□□ -1.51
USB1Q9BQ65 AL360181.4-201ENST00000621752 134 ntBASIC5.64□□□□□ -1.51
USB1Q9BQ65 AC090617.7-201ENST00000623952 126 ntBASIC5.64□□□□□ -1.51
USB1Q9BQ65 RACK1-235ENST00000626067 564 ntTSL 2 BASIC5.64□□□□□ -1.51
USB1Q9BQ65 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
USB1Q9BQ65 HSP90AA4P-202ENST00000506915 2228 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms