Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CDK5RAP1Q96SZ6 AC099489.2-201ENST00000574976 260 ntBASIC4.58□□□□□ -1.68
CDK5RAP1Q96SZ6 MIR3118-1-201ENST00000581787 76 ntBASIC4.58□□□□□ -1.68
CDK5RAP1Q96SZ6 MIR4697-201ENST00000582977 78 ntBASIC4.58□□□□□ -1.68
CDK5RAP1Q96SZ6 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.58□□□□□ -1.68
CDK5RAP1Q96SZ6 IPO5P1-202ENST00000600039 287 ntBASIC4.58□□□□□ -1.68
CDK5RAP1Q96SZ6 AC010591.1-201ENST00000603941 649 ntBASIC4.58□□□□□ -1.68
CDK5RAP1Q96SZ6 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.58□□□□□ -1.68
CDK5RAP1Q96SZ6 AC005014.2-201ENST00000607795 599 ntBASIC4.58□□□□□ -1.68
CDK5RAP1Q96SZ6 MIR6716-201ENST00000613413 80 ntBASIC4.58□□□□□ -1.68
CDK5RAP1Q96SZ6 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CDK5RAP1Q96SZ6 AC140113.4-201ENST00000622087 222 ntBASIC4.58□□□□□ -1.68
CDK5RAP1Q96SZ6 AC007546.2-201ENST00000623996 360 ntBASIC4.58□□□□□ -1.68
CDK5RAP1Q96SZ6 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.58□□□□□ -1.68
CDK5RAP1Q96SZ6 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CDK5RAP1Q96SZ6 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.58□□□□□ -1.68
CDK5RAP1Q96SZ6 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CDK5RAP1Q96SZ6 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.58□□□□□ -1.68
CDK5RAP1Q96SZ6 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CDK5RAP1Q96SZ6 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CDK5RAP1Q96SZ6 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CDK5RAP1Q96SZ6 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.57□□□□□ -1.68
CDK5RAP1Q96SZ6 EOGT-210ENST00000615922 1931 ntBASIC4.57□□□□□ -1.68
CDK5RAP1Q96SZ6 RPL32P3-201ENST00000359025 275 ntBASIC4.57□□□□□ -1.68
CDK5RAP1Q96SZ6 SNORA70.2-201ENST00000364506 135 ntBASIC4.57□□□□□ -1.68
CDK5RAP1Q96SZ6 RNU6-343P-201ENST00000364709 104 ntBASIC4.57□□□□□ -1.68
CDK5RAP1Q96SZ6 RNU6-169P-201ENST00000365336 107 ntBASIC4.57□□□□□ -1.68
CDK5RAP1Q96SZ6 RNU1-44P-201ENST00000384453 163 ntBASIC4.57□□□□□ -1.68
CDK5RAP1Q96SZ6 CISD1P1-201ENST00000393907 327 ntBASIC4.57□□□□□ -1.68
CDK5RAP1Q96SZ6 TMSB4XP8-201ENST00000402089 135 ntBASIC4.57□□□□□ -1.68
CDK5RAP1Q96SZ6 AL078604.1-201ENST00000404609 466 ntBASIC4.57□□□□□ -1.68
CDK5RAP1Q96SZ6 RPS20P14-201ENST00000412545 360 ntBASIC4.57□□□□□ -1.68
CDK5RAP1Q96SZ6 TMSB4XP6-201ENST00000415187 135 ntBASIC4.57□□□□□ -1.68
CDK5RAP1Q96SZ6 TMSB4XP1-201ENST00000424567 135 ntBASIC4.57□□□□□ -1.68
CDK5RAP1Q96SZ6 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.57□□□□□ -1.68
CDK5RAP1Q96SZ6 CBX3P6-201ENST00000430257 527 ntBASIC4.57□□□□□ -1.68
CDK5RAP1Q96SZ6 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.57□□□□□ -1.68
CDK5RAP1Q96SZ6 RPS3AP52-201ENST00000435639 297 ntBASIC4.57□□□□□ -1.68
CDK5RAP1Q96SZ6 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.57□□□□□ -1.68
CDK5RAP1Q96SZ6 SNRPEP7-201ENST00000438350 220 ntBASIC4.57□□□□□ -1.68
CDK5RAP1Q96SZ6 HSPE1P28-201ENST00000443139 211 ntBASIC4.57□□□□□ -1.68
CDK5RAP1Q96SZ6 MRPS31P2-201ENST00000451581 518 ntBASIC4.57□□□□□ -1.68
CDK5RAP1Q96SZ6 AC009963.2-201ENST00000453431 138 ntBASIC4.57□□□□□ -1.68
CDK5RAP1Q96SZ6 RPS4XP10-201ENST00000465034 731 ntBASIC4.57□□□□□ -1.68
CDK5RAP1Q96SZ6 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CDK5RAP1Q96SZ6 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.57□□□□□ -1.68
CDK5RAP1Q96SZ6 AC010587.1-201ENST00000505809 469 ntBASIC4.57□□□□□ -1.68
CDK5RAP1Q96SZ6 NPM1P41-201ENST00000512920 831 ntBASIC4.57□□□□□ -1.68
CDK5RAP1Q96SZ6 SNORD60.2-201ENST00000516883 86 ntBASIC4.57□□□□□ -1.68
CDK5RAP1Q96SZ6 AC090151.1-201ENST00000520784 730 ntBASIC4.57□□□□□ -1.68
CDK5RAP1Q96SZ6 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.57□□□□□ -1.68
CDK5RAP1Q96SZ6 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC4.57□□□□□ -1.68
CDK5RAP1Q96SZ6 AC022616.3-201ENST00000523940 148 ntBASIC4.57□□□□□ -1.68
CDK5RAP1Q96SZ6 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.57□□□□□ -1.68
CDK5RAP1Q96SZ6 AC090751.1-201ENST00000566966 267 ntBASIC4.57□□□□□ -1.68
CDK5RAP1Q96SZ6 NUTF2P8-201ENST00000604593 363 ntBASIC4.57□□□□□ -1.68
CDK5RAP1Q96SZ6 AC113194.1-201ENST00000606037 500 ntBASIC4.57□□□□□ -1.68
CDK5RAP1Q96SZ6 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.57□□□□□ -1.68
CDK5RAP1Q96SZ6 AL355472.4-201ENST00000610233 626 ntBASIC4.57□□□□□ -1.68
CDK5RAP1Q96SZ6 AC244517.12-201ENST00000623581 663 ntBASIC4.57□□□□□ -1.68
CDK5RAP1Q96SZ6 AC091953.2-201ENST00000623979 160 ntBASIC4.57□□□□□ -1.68
CDK5RAP1Q96SZ6 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.57□□□□□ -1.68
CDK5RAP1Q96SZ6 AC079597.1-201ENST00000624306 508 ntBASIC4.57□□□□□ -1.68
CDK5RAP1Q96SZ6 AC011944.2-201ENST00000624440 683 ntBASIC4.57□□□□□ -1.68
CDK5RAP1Q96SZ6 AC010149.2-201ENST00000637608 315 ntBASIC4.57□□□□□ -1.68
CDK5RAP1Q96SZ6 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.57□□□□□ -1.68
CDK5RAP1Q96SZ6 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CDK5RAP1Q96SZ6 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.57□□□□□ -1.68
CDK5RAP1Q96SZ6 DBF4P1-201ENST00000412976 1892 ntBASIC4.57□□□□□ -1.68
CDK5RAP1Q96SZ6 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.57□□□□□ -1.68
CDK5RAP1Q96SZ6 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.57□□□□□ -1.68
CDK5RAP1Q96SZ6 AC119744.1-201ENST00000454746 1715 ntBASIC4.57□□□□□ -1.68
CDK5RAP1Q96SZ6 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.57□□□□□ -1.68
CDK5RAP1Q96SZ6 LINC00561-201ENST00000565815 2738 ntBASIC4.57□□□□□ -1.68
CDK5RAP1Q96SZ6 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.57□□□□□ -1.68
CDK5RAP1Q96SZ6 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.57□□□□□ -1.68
CDK5RAP1Q96SZ6 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CDK5RAP1Q96SZ6 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 AC006020.1-201ENST00000420179 1854 ntBASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 AC067945.1-201ENST00000342609 618 ntBASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 MIR331-201ENST00000362302 94 ntBASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 RNU6-251P-201ENST00000363235 104 ntBASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 RNA5SP175-201ENST00000364275 119 ntBASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 RNA5SP366-201ENST00000365454 123 ntBASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 Y_RNA.401-201ENST00000383965 117 ntBASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 MIR506-201ENST00000384998 124 ntBASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.56□□□□□ -1.68
CDK5RAP1Q96SZ6 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms