Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 AC090607.5-201ENST00000615692 224 ntBASIC5.97□□□□□ -1.45
HLA-CQ95604 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
HLA-CQ95604 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HLA-CQ95604 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
HLA-CQ95604 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HLA-CQ95604 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
HLA-CQ95604 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
HLA-CQ95604 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HLA-CQ95604 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.97□□□□□ -1.45
HLA-CQ95604 AC005332.5-201ENST00000591222 2919 ntBASIC5.97□□□□□ -1.45
HLA-CQ95604 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.97□□□□□ -1.45
HLA-CQ95604 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HLA-CQ95604 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
HLA-CQ95604 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.97□□□□□ -1.45
HLA-CQ95604 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.45
HLA-CQ95604 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
HLA-CQ95604 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.96□□□□□ -1.45
HLA-CQ95604 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
HLA-CQ95604 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.96□□□□□ -1.45
HLA-CQ95604 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
HLA-CQ95604 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
HLA-CQ95604 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.96□□□□□ -1.45
HLA-CQ95604 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
HLA-CQ95604 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.96□□□□□ -1.45
HLA-CQ95604 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
HLA-CQ95604 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
HLA-CQ95604 Y_RNA.16-201ENST00000362421 102 ntBASIC5.96□□□□□ -1.46
HLA-CQ95604 U3.2-201ENST00000362981 210 ntBASIC5.96□□□□□ -1.46
HLA-CQ95604 RNU6-740P-201ENST00000364734 105 ntBASIC5.96□□□□□ -1.46
HLA-CQ95604 RNU1-43P-201ENST00000365052 165 ntBASIC5.96□□□□□ -1.46
HLA-CQ95604 MIR301A-201ENST00000385261 86 ntBASIC5.96□□□□□ -1.46
HLA-CQ95604 RPL21P67-201ENST00000402896 478 ntBASIC5.96□□□□□ -1.46
HLA-CQ95604 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.96□□□□□ -1.46
HLA-CQ95604 U3.36-201ENST00000408418 213 ntBASIC5.96□□□□□ -1.46
HLA-CQ95604 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.96□□□□□ -1.46
HLA-CQ95604 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.96□□□□□ -1.46
HLA-CQ95604 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.96□□□□□ -1.46
HLA-CQ95604 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HLA-CQ95604 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
HLA-CQ95604 AC074255.1-201ENST00000511259 501 ntBASIC5.96□□□□□ -1.46
HLA-CQ95604 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.96□□□□□ -1.46
HLA-CQ95604 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.96□□□□□ -1.46
HLA-CQ95604 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.96□□□□□ -1.46
HLA-CQ95604 AC009314.1-201ENST00000603871 304 ntBASIC5.96□□□□□ -1.46
HLA-CQ95604 MIR7641-1-201ENST00000627518 61 ntBASIC5.96□□□□□ -1.46
HLA-CQ95604 AL596275.2-204ENST00000641628 552 ntBASIC5.96□□□□□ -1.46
HLA-CQ95604 AL596275.2-206ENST00000641957 626 ntBASIC5.96□□□□□ -1.46
HLA-CQ95604 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
HLA-CQ95604 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.96□□□□□ -1.46
HLA-CQ95604 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
HLA-CQ95604 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HLA-CQ95604 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HLA-CQ95604 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HLA-CQ95604 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HLA-CQ95604 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HLA-CQ95604 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC5.95□□□□□ -1.46
HLA-CQ95604 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.95□□□□□ -1.46
HLA-CQ95604 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HLA-CQ95604 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HLA-CQ95604 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
HLA-CQ95604 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.95□□□□□ -1.46
HLA-CQ95604 CTNNA1P1-201ENST00000515849 2728 ntBASIC5.95□□□□□ -1.46
HLA-CQ95604 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.95□□□□□ -1.46
HLA-CQ95604 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
HLA-CQ95604 Y_RNA.170-201ENST00000363746 110 ntBASIC5.95□□□□□ -1.46
HLA-CQ95604 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.95□□□□□ -1.46
HLA-CQ95604 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC5.95□□□□□ -1.46
HLA-CQ95604 RPL7AP73-201ENST00000413490 353 ntBASIC5.95□□□□□ -1.46
HLA-CQ95604 COX6CP10-201ENST00000416832 224 ntBASIC5.95□□□□□ -1.46
HLA-CQ95604 CYCSP10-201ENST00000417973 294 ntBASIC5.95□□□□□ -1.46
HLA-CQ95604 RPS11P1-201ENST00000451072 473 ntBASIC5.95□□□□□ -1.46
HLA-CQ95604 RN7SL385P-201ENST00000468873 276 ntBASIC5.95□□□□□ -1.46
HLA-CQ95604 BX284632.1-201ENST00000478218 541 ntBASIC5.95□□□□□ -1.46
HLA-CQ95604 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC5.95□□□□□ -1.46
HLA-CQ95604 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC5.95□□□□□ -1.46
HLA-CQ95604 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.95□□□□□ -1.46
HLA-CQ95604 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.95□□□□□ -1.46
HLA-CQ95604 RNU6-927P-201ENST00000516199 100 ntBASIC5.95□□□□□ -1.46
HLA-CQ95604 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.95□□□□□ -1.46
HLA-CQ95604 BNIP3P1-201ENST00000547295 580 ntBASIC5.95□□□□□ -1.46
HLA-CQ95604 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.95□□□□□ -1.46
HLA-CQ95604 MIR4643-201ENST00000577473 78 ntBASIC5.95□□□□□ -1.46
HLA-CQ95604 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HLA-CQ95604 MIR1273C-201ENST00000578669 77 ntBASIC5.95□□□□□ -1.46
HLA-CQ95604 AC008814.1-201ENST00000603797 406 ntBASIC5.95□□□□□ -1.46
HLA-CQ95604 CYCSP1-201ENST00000604815 315 ntBASIC5.95□□□□□ -1.46
HLA-CQ95604 AC123912.5-201ENST00000605470 343 ntBASIC5.95□□□□□ -1.46
HLA-CQ95604 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HLA-CQ95604 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HLA-CQ95604 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
HLA-CQ95604 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HLA-CQ95604 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.95□□□□□ -1.46
HLA-CQ95604 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HLA-CQ95604 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HLA-CQ95604 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HLA-CQ95604 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.94□□□□□ -1.46
HLA-CQ95604 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC5.94□□□□□ -1.46
HLA-CQ95604 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HLA-CQ95604 AC008957.3-201ENST00000624112 2242 ntBASIC5.94□□□□□ -1.46
HLA-CQ95604 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms