Protein–RNA interactions for Protein: Q12950

FOXD4, Forkhead box protein D4, humanhuman

Predicted RBP Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4Q12950 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.92□□□□□ -1.78
FOXD4Q12950 RNU6-223P-201ENST00000362830 107 ntBASIC3.92□□□□□ -1.78
FOXD4Q12950 RNU6-637P-201ENST00000384050 107 ntBASIC3.92□□□□□ -1.78
FOXD4Q12950 MIR3065-201ENST00000390137 79 ntBASIC3.92□□□□□ -1.78
FOXD4Q12950 SDHCP2-201ENST00000398565 501 ntBASIC3.92□□□□□ -1.78
FOXD4Q12950 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.92□□□□□ -1.78
FOXD4Q12950 RNA5SP36-201ENST00000410197 133 ntBASIC3.92□□□□□ -1.78
FOXD4Q12950 SPA17P1-201ENST00000416656 452 ntBASIC3.92□□□□□ -1.78
FOXD4Q12950 AC092573.2-201ENST00000434546 243 ntBASIC3.92□□□□□ -1.78
FOXD4Q12950 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.92□□□□□ -1.78
FOXD4Q12950 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.92□□□□□ -1.78
FOXD4Q12950 MTND2P24-201ENST00000453434 806 ntBASIC3.92□□□□□ -1.78
FOXD4Q12950 AC010099.1-201ENST00000455434 375 ntBASIC3.92□□□□□ -1.78
FOXD4Q12950 DHFRP3-201ENST00000455595 559 ntBASIC3.92□□□□□ -1.78
FOXD4Q12950 AC010468.1-201ENST00000461022 817 ntBASIC3.92□□□□□ -1.78
FOXD4Q12950 AF213884.1-201ENST00000488102 463 ntBASIC3.92□□□□□ -1.78
FOXD4Q12950 RN7SL810P-201ENST00000493031 276 ntBASIC3.92□□□□□ -1.78
FOXD4Q12950 AC025554.1-201ENST00000505641 188 ntBASIC3.92□□□□□ -1.78
FOXD4Q12950 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.92□□□□□ -1.78
FOXD4Q12950 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
FOXD4Q12950 AP003730.1-201ENST00000524605 285 ntBASIC3.92□□□□□ -1.78
FOXD4Q12950 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.92□□□□□ -1.78
FOXD4Q12950 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.92□□□□□ -1.78
FOXD4Q12950 OR4H12P-201ENST00000556269 907 ntBASIC3.92□□□□□ -1.78
FOXD4Q12950 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.92□□□□□ -1.78
FOXD4Q12950 AMZ2P1-203ENST00000565833 850 ntBASIC3.92□□□□□ -1.78
FOXD4Q12950 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.92□□□□□ -1.78
FOXD4Q12950 AC105129.3-201ENST00000605455 485 ntBASIC3.92□□□□□ -1.78
FOXD4Q12950 AC090186.1-201ENST00000605991 572 ntBASIC3.92□□□□□ -1.78
FOXD4Q12950 AC245008.1-201ENST00000608123 476 ntBASIC3.92□□□□□ -1.78
FOXD4Q12950 AC239868.4-201ENST00000608318 671 ntBASIC3.92□□□□□ -1.78
FOXD4Q12950 AL161629.2-201ENST00000615347 275 ntBASIC3.92□□□□□ -1.78
FOXD4Q12950 AC007546.1-201ENST00000619452 559 ntBASIC3.92□□□□□ -1.78
FOXD4Q12950 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
FOXD4Q12950 SRP72P2-201ENST00000344851 1979 ntBASIC3.92□□□□□ -1.78
FOXD4Q12950 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.92□□□□□ -1.78
FOXD4Q12950 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.92□□□□□ -1.78
FOXD4Q12950 MFSD8-242ENST00000641690 4199 ntBASIC3.92□□□□□ -1.78
FOXD4Q12950 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
FOXD4Q12950 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
FOXD4Q12950 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.91□□□□□ -1.78
FOXD4Q12950 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
FOXD4Q12950 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
FOXD4Q12950 Y_RNA.97-201ENST00000363094 102 ntBASIC3.91□□□□□ -1.78
FOXD4Q12950 RNU5F-7P-201ENST00000363696 115 ntBASIC3.91□□□□□ -1.78
FOXD4Q12950 SNORD46.1-201ENST00000364139 104 ntBASIC3.91□□□□□ -1.78
FOXD4Q12950 MIR514A1-201ENST00000385133 98 ntBASIC3.91□□□□□ -1.78
FOXD4Q12950 U8.14-201ENST00000390843 143 ntBASIC3.91□□□□□ -1.78
FOXD4Q12950 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.91□□□□□ -1.78
FOXD4Q12950 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.91□□□□□ -1.78
FOXD4Q12950 AL365184.2-201ENST00000431139 435 ntBASIC3.91□□□□□ -1.78
FOXD4Q12950 AL353705.1-201ENST00000433468 480 ntBASIC3.91□□□□□ -1.78
FOXD4Q12950 RPS3AP54-201ENST00000435535 734 ntBASIC3.91□□□□□ -1.78
FOXD4Q12950 UBE2FP3-201ENST00000436366 524 ntBASIC3.91□□□□□ -1.78
FOXD4Q12950 RPL35AP22-201ENST00000436855 335 ntBASIC3.91□□□□□ -1.78
FOXD4Q12950 UBE2V1P13-201ENST00000436983 439 ntBASIC3.91□□□□□ -1.78
FOXD4Q12950 RSU1P2-202ENST00000437884 485 ntBASIC3.91□□□□□ -1.78
FOXD4Q12950 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.91□□□□□ -1.78
FOXD4Q12950 RPL23AP89-201ENST00000439324 255 ntBASIC3.91□□□□□ -1.78
FOXD4Q12950 AC114495.1-201ENST00000441274 436 ntBASIC3.91□□□□□ -1.78
FOXD4Q12950 TRIM60P18-201ENST00000441518 828 ntBASIC3.91□□□□□ -1.78
FOXD4Q12950 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.91□□□□□ -1.78
FOXD4Q12950 GDI2P2-201ENST00000445131 608 ntBASIC3.91□□□□□ -1.78
FOXD4Q12950 AP000542.1-201ENST00000448473 371 ntBASIC3.91□□□□□ -1.78
FOXD4Q12950 RPS17P13-201ENST00000448974 407 ntBASIC3.91□□□□□ -1.78
FOXD4Q12950 PAXBP1P1-201ENST00000449315 447 ntBASIC3.91□□□□□ -1.78
FOXD4Q12950 AC073387.1-201ENST00000453261 709 ntBASIC3.91□□□□□ -1.78
FOXD4Q12950 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
FOXD4Q12950 OR6K1P-201ENST00000456766 971 ntBASIC3.91□□□□□ -1.78
FOXD4Q12950 AC091564.1-201ENST00000464563 479 ntBASIC3.91□□□□□ -1.78
FOXD4Q12950 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.91□□□□□ -1.78
FOXD4Q12950 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.91□□□□□ -1.78
FOXD4Q12950 MTND5P13-201ENST00000513046 1079 ntBASIC3.91□□□□□ -1.78
FOXD4Q12950 SCARNA13-201ENST00000516672 275 ntBASIC3.91□□□□□ -1.78
FOXD4Q12950 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.91□□□□□ -1.78
FOXD4Q12950 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.91□□□□□ -1.78
FOXD4Q12950 OR5AP1P-201ENST00000529730 940 ntBASIC3.91□□□□□ -1.78
FOXD4Q12950 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.91□□□□□ -1.78
FOXD4Q12950 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.91□□□□□ -1.78
FOXD4Q12950 AC034268.2-201ENST00000571784 482 ntBASIC3.91□□□□□ -1.78
FOXD4Q12950 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.91□□□□□ -1.78
FOXD4Q12950 MIR3944-201ENST00000581277 108 ntBASIC3.91□□□□□ -1.78
FOXD4Q12950 AP001981.2-201ENST00000603241 418 ntBASIC3.91□□□□□ -1.78
FOXD4Q12950 AC079587.1-201ENST00000603846 277 ntBASIC3.91□□□□□ -1.78
FOXD4Q12950 MIR432-201ENST00000606207 94 ntBASIC3.91□□□□□ -1.78
FOXD4Q12950 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.91□□□□□ -1.78
FOXD4Q12950 AC026422.1-201ENST00000623961 452 ntBASIC3.91□□□□□ -1.78
FOXD4Q12950 AC073530.2-201ENST00000623987 261 ntBASIC3.91□□□□□ -1.78
FOXD4Q12950 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.91□□□□□ -1.78
FOXD4Q12950 MIR492-201ENST00000638676 116 ntBASIC3.91□□□□□ -1.78
FOXD4Q12950 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
FOXD4Q12950 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
FOXD4Q12950 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.91□□□□□ -1.78
FOXD4Q12950 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
FOXD4Q12950 AC006504.1-201ENST00000562493 3666 ntBASIC3.9□□□□□ -1.78
FOXD4Q12950 DDX10P1-201ENST00000448545 1933 ntBASIC3.9□□□□□ -1.78
FOXD4Q12950 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
FOXD4Q12950 RNU5F-6P-201ENST00000362979 116 ntBASIC3.9□□□□□ -1.79
FOXD4Q12950 RNU6-853P-201ENST00000364306 107 ntBASIC3.9□□□□□ -1.79
FOXD4Q12950 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms