Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 AL355497.1-201ENST00000406262 551 ntBASIC6.61□□□□□ -1.35
NUBP1P53384 YPEL5P1-201ENST00000419731 367 ntBASIC6.61□□□□□ -1.35
NUBP1P53384 AC094019.1-201ENST00000434678 472 ntBASIC6.61□□□□□ -1.35
NUBP1P53384 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.61□□□□□ -1.35
NUBP1P53384 HSPE1P13-201ENST00000451143 297 ntBASIC6.61□□□□□ -1.35
NUBP1P53384 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC6.61□□□□□ -1.35
NUBP1P53384 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC6.61□□□□□ -1.35
NUBP1P53384 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NUBP1P53384 SCARNA8-201ENST00000515924 131 ntBASIC6.61□□□□□ -1.35
NUBP1P53384 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.61□□□□□ -1.35
NUBP1P53384 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.61□□□□□ -1.35
NUBP1P53384 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC6.61□□□□□ -1.35
NUBP1P53384 AL670379.3-201ENST00000605040 251 ntBASIC6.61□□□□□ -1.35
NUBP1P53384 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.61□□□□□ -1.35
NUBP1P53384 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC6.61□□□□□ -1.35
NUBP1P53384 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NUBP1P53384 TMEM108-201ENST00000321871 3744 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
NUBP1P53384 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC6.61□□□□□ -1.35
NUBP1P53384 NQO1-201ENST00000320623 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NUBP1P53384 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NUBP1P53384 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC6.61□□□□□ -1.35
NUBP1P53384 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
NUBP1P53384 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NUBP1P53384 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC6.61□□□□□ -1.35
NUBP1P53384 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NUBP1P53384 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NUBP1P53384 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NUBP1P53384 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NUBP1P53384 BCLAF1P2-201ENST00000624956 2609 ntBASIC6.61□□□□□ -1.35
NUBP1P53384 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NUBP1P53384 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NUBP1P53384 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NUBP1P53384 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.6□□□□□ -1.35
NUBP1P53384 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
NUBP1P53384 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
NUBP1P53384 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
NUBP1P53384 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC6.6□□□□□ -1.35
NUBP1P53384 AC145138.1-201ENST00000512908 2851 ntBASIC6.6□□□□□ -1.35
NUBP1P53384 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NUBP1P53384 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
NUBP1P53384 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NUBP1P53384 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NUBP1P53384 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC6.6□□□□□ -1.35
NUBP1P53384 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
NUBP1P53384 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
NUBP1P53384 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
NUBP1P53384 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
NUBP1P53384 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
NUBP1P53384 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
NUBP1P53384 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NUBP1P53384 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
NUBP1P53384 RNU6-235P-201ENST00000362644 107 ntBASIC6.6□□□□□ -1.35
NUBP1P53384 RNU6-728P-201ENST00000365375 104 ntBASIC6.6□□□□□ -1.35
NUBP1P53384 BPHL-201ENST00000380368 797 ntTSL 5 BASIC6.6□□□□□ -1.35
NUBP1P53384 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC6.6□□□□□ -1.35
NUBP1P53384 RPS26P42-201ENST00000413485 326 ntBASIC6.6□□□□□ -1.35
NUBP1P53384 AC096649.2-201ENST00000416186 393 ntBASIC6.6□□□□□ -1.35
NUBP1P53384 AL590383.1-201ENST00000428602 75 ntBASIC6.6□□□□□ -1.35
NUBP1P53384 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NUBP1P53384 FTH1P10-202ENST00000430907 550 ntBASIC6.6□□□□□ -1.35
NUBP1P53384 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NUBP1P53384 AC245047.8-201ENST00000456455 284 ntBASIC6.6□□□□□ -1.35
NUBP1P53384 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC6.6□□□□□ -1.35
NUBP1P53384 KC877373.1-201ENST00000479066 408 ntBASIC6.6□□□□□ -1.35
NUBP1P53384 RPS29P24-201ENST00000486345 171 ntBASIC6.6□□□□□ -1.35
NUBP1P53384 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC6.6□□□□□ -1.35
NUBP1P53384 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC6.6□□□□□ -1.35
NUBP1P53384 RNU6-772P-201ENST00000516042 105 ntBASIC6.6□□□□□ -1.35
NUBP1P53384 MRPS21P8-201ENST00000569196 235 ntBASIC6.6□□□□□ -1.35
NUBP1P53384 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC6.6□□□□□ -1.35
NUBP1P53384 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.6□□□□□ -1.35
NUBP1P53384 AC019159.1-201ENST00000605094 187 ntBASIC6.6□□□□□ -1.35
NUBP1P53384 RNA5SP440-201ENST00000612665 119 ntBASIC6.6□□□□□ -1.35
NUBP1P53384 MIR6085-201ENST00000618314 110 ntBASIC6.6□□□□□ -1.35
NUBP1P53384 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC6.6□□□□□ -1.35
NUBP1P53384 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC6.6□□□□□ -1.35
NUBP1P53384 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NUBP1P53384 RECQL-204ENST00000444129 3702 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
NUBP1P53384 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NUBP1P53384 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
NUBP1P53384 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.6□□□□□ -1.35
NUBP1P53384 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
NUBP1P53384 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
NUBP1P53384 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.6□□□□□ -1.35
NUBP1P53384 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NUBP1P53384 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC6.59□□□□□ -1.35
NUBP1P53384 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
NUBP1P53384 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC6.59□□□□□ -1.35
NUBP1P53384 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
NUBP1P53384 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
NUBP1P53384 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
NUBP1P53384 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
NUBP1P53384 ITPK1-AS1-201ENST00000553639 4701 ntBASIC6.59□□□□□ -1.35
NUBP1P53384 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.35
NUBP1P53384 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
NUBP1P53384 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
NUBP1P53384 RNU6-1141P-201ENST00000364520 107 ntBASIC6.59□□□□□ -1.35
NUBP1P53384 RNU6-969P-201ENST00000383900 105 ntBASIC6.59□□□□□ -1.35
NUBP1P53384 RNU6-245P-201ENST00000384020 107 ntBASIC6.59□□□□□ -1.35
NUBP1P53384 RNU6-356P-201ENST00000384140 107 ntBASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms