Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 AC107016.1-201ENST00000550463 337 ntBASIC3.41□□□□□ -1.86
HLA-DOBP13765 AL360157.1-201ENST00000565962 87 ntBASIC3.41□□□□□ -1.86
HLA-DOBP13765 TPRKBP2-201ENST00000565969 475 ntBASIC3.41□□□□□ -1.86
HLA-DOBP13765 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.41□□□□□ -1.86
HLA-DOBP13765 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.41□□□□□ -1.86
HLA-DOBP13765 AC068790.3-201ENST00000602988 553 ntBASIC3.41□□□□□ -1.86
HLA-DOBP13765 AC011451.2-201ENST00000604303 598 ntBASIC3.41□□□□□ -1.86
HLA-DOBP13765 AL137849.1-201ENST00000604767 169 ntBASIC3.41□□□□□ -1.86
HLA-DOBP13765 RBM11P1-201ENST00000604951 799 ntBASIC3.41□□□□□ -1.86
HLA-DOBP13765 AC055876.5-201ENST00000605667 259 ntBASIC3.41□□□□□ -1.86
HLA-DOBP13765 BRDTP1-201ENST00000605735 677 ntBASIC3.41□□□□□ -1.86
HLA-DOBP13765 RNA5SP108-201ENST00000605921 117 ntBASIC3.41□□□□□ -1.86
HLA-DOBP13765 AC011816.2-201ENST00000607089 556 ntBASIC3.41□□□□□ -1.86
HLA-DOBP13765 AL592295.2-201ENST00000612578 206 ntBASIC3.41□□□□□ -1.86
HLA-DOBP13765 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
HLA-DOBP13765 AC012150.2-201ENST00000621300 544 ntBASIC3.41□□□□□ -1.86
HLA-DOBP13765 OR5H6-203ENST00000642105 978 ntBASIC3.41□□□□□ -1.86
HLA-DOBP13765 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DOBP13765 AC006504.1-201ENST00000562493 3666 ntBASIC3.41□□□□□ -1.86
HLA-DOBP13765 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DOBP13765 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DOBP13765 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DOBP13765 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DOBP13765 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DOBP13765 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.41□□□□□ -1.86
HLA-DOBP13765 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.4□□□□□ -1.86
HLA-DOBP13765 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
HLA-DOBP13765 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
HLA-DOBP13765 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.4□□□□□ -1.86
HLA-DOBP13765 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.86
HLA-DOBP13765 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.4□□□□□ -1.86
HLA-DOBP13765 OR4G2P-201ENST00000328113 903 ntBASIC3.4□□□□□ -1.87
HLA-DOBP13765 U1.1-201ENST00000384101 164 ntBASIC3.4□□□□□ -1.87
HLA-DOBP13765 MIR181A1-201ENST00000385026 110 ntBASIC3.4□□□□□ -1.87
HLA-DOBP13765 RPL23AP32-201ENST00000395315 459 ntBASIC3.4□□□□□ -1.87
HLA-DOBP13765 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.4□□□□□ -1.87
HLA-DOBP13765 GSTA9P-201ENST00000406231 611 ntBASIC3.4□□□□□ -1.87
HLA-DOBP13765 BX295541.1-201ENST00000417774 250 ntBASIC3.4□□□□□ -1.87
HLA-DOBP13765 ISCA1P6-201ENST00000427740 390 ntBASIC3.4□□□□□ -1.87
HLA-DOBP13765 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.4□□□□□ -1.87
HLA-DOBP13765 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.4□□□□□ -1.87
HLA-DOBP13765 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.4□□□□□ -1.87
HLA-DOBP13765 AL359385.1-201ENST00000456509 365 ntBASIC3.4□□□□□ -1.87
HLA-DOBP13765 RBM43P1-201ENST00000476891 1081 ntBASIC3.4□□□□□ -1.87
HLA-DOBP13765 VN1R105P-201ENST00000486595 910 ntBASIC3.4□□□□□ -1.87
HLA-DOBP13765 AC055855.1-201ENST00000489563 579 ntBASIC3.4□□□□□ -1.87
HLA-DOBP13765 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.4□□□□□ -1.87
HLA-DOBP13765 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.4□□□□□ -1.87
HLA-DOBP13765 RNU4-60P-201ENST00000517239 135 ntBASIC3.4□□□□□ -1.87
HLA-DOBP13765 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
HLA-DOBP13765 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.4□□□□□ -1.87
HLA-DOBP13765 DEFB109D-201ENST00000529497 240 ntBASIC3.4□□□□□ -1.87
HLA-DOBP13765 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
HLA-DOBP13765 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.4□□□□□ -1.87
HLA-DOBP13765 AC099489.2-201ENST00000574976 260 ntBASIC3.4□□□□□ -1.87
HLA-DOBP13765 RN7SL703P-201ENST00000578485 302 ntBASIC3.4□□□□□ -1.87
HLA-DOBP13765 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.4□□□□□ -1.87
HLA-DOBP13765 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.4□□□□□ -1.87
HLA-DOBP13765 MIR4801-201ENST00000582704 82 ntBASIC3.4□□□□□ -1.87
HLA-DOBP13765 AC053481.4-201ENST00000583164 216 ntBASIC3.4□□□□□ -1.87
HLA-DOBP13765 AC005255.1-201ENST00000593748 216 ntBASIC3.4□□□□□ -1.87
HLA-DOBP13765 AC020910.2-201ENST00000603635 610 ntBASIC3.4□□□□□ -1.87
HLA-DOBP13765 IGHV3-29-201ENST00000604817 344 ntBASIC3.4□□□□□ -1.87
HLA-DOBP13765 MIR486-1-201ENST00000612171 68 ntBASIC3.4□□□□□ -1.87
HLA-DOBP13765 AC091905.1-201ENST00000624400 311 ntBASIC3.4□□□□□ -1.87
HLA-DOBP13765 AC068724.3-201ENST00000625906 87 ntBASIC3.4□□□□□ -1.87
HLA-DOBP13765 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
HLA-DOBP13765 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.4□□□□□ -1.87
HLA-DOBP13765 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
HLA-DOBP13765 MTND5P3-201ENST00000438536 1800 ntBASIC3.4□□□□□ -1.87
HLA-DOBP13765 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HLA-DOBP13765 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HLA-DOBP13765 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HLA-DOBP13765 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.39□□□□□ -1.87
HLA-DOBP13765 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HLA-DOBP13765 RNU6-263P-201ENST00000363811 107 ntBASIC3.39□□□□□ -1.87
HLA-DOBP13765 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
HLA-DOBP13765 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.39□□□□□ -1.87
HLA-DOBP13765 RNU6-114P-201ENST00000384704 105 ntBASIC3.39□□□□□ -1.87
HLA-DOBP13765 MIR30B-201ENST00000384850 88 ntBASIC3.39□□□□□ -1.87
HLA-DOBP13765 RNU6-837P-201ENST00000391056 108 ntBASIC3.39□□□□□ -1.87
HLA-DOBP13765 CCNG1P1-201ENST00000406783 885 ntBASIC3.39□□□□□ -1.87
HLA-DOBP13765 RNU6-195P-201ENST00000411352 109 ntBASIC3.39□□□□□ -1.87
HLA-DOBP13765 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.39□□□□□ -1.87
HLA-DOBP13765 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.39□□□□□ -1.87
HLA-DOBP13765 USP9YP36-201ENST00000424581 829 ntBASIC3.39□□□□□ -1.87
HLA-DOBP13765 AC233728.2-201ENST00000425348 757 ntBASIC3.39□□□□□ -1.87
HLA-DOBP13765 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.39□□□□□ -1.87
HLA-DOBP13765 PSPHP1-201ENST00000450062 261 ntBASIC3.39□□□□□ -1.87
HLA-DOBP13765 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
HLA-DOBP13765 AC114967.1-201ENST00000504890 259 ntBASIC3.39□□□□□ -1.87
HLA-DOBP13765 HMGB1P29-201ENST00000505659 499 ntBASIC3.39□□□□□ -1.87
HLA-DOBP13765 AC010493.1-201ENST00000513479 292 ntBASIC3.39□□□□□ -1.87
HLA-DOBP13765 AC017037.2-201ENST00000513850 890 ntBASIC3.39□□□□□ -1.87
HLA-DOBP13765 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.39□□□□□ -1.87
HLA-DOBP13765 RNA5SP143-201ENST00000516936 115 ntBASIC3.39□□□□□ -1.87
HLA-DOBP13765 SUMO2P20-201ENST00000520803 283 ntBASIC3.39□□□□□ -1.87
HLA-DOBP13765 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.39□□□□□ -1.87
HLA-DOBP13765 MED28P5-201ENST00000528254 438 ntBASIC3.39□□□□□ -1.87
HLA-DOBP13765 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms