Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 RNU6-171P-201ENST00000384354 107 ntBASIC6.12□□□□□ -1.43
HOXA2O43364 RNU6-125P-201ENST00000384505 107 ntBASIC6.12□□□□□ -1.43
HOXA2O43364 MIR135A2-201ENST00000384854 100 ntBASIC6.12□□□□□ -1.43
HOXA2O43364 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
HOXA2O43364 MRM2-202ENST00000407040 582 ntTSL 3 BASIC6.12□□□□□ -1.43
HOXA2O43364 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HOXA2O43364 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC6.12□□□□□ -1.43
HOXA2O43364 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HOXA2O43364 HSPA8P1-201ENST00000425843 1833 ntBASIC6.12□□□□□ -1.43
HOXA2O43364 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HOXA2O43364 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC6.12□□□□□ -1.43
HOXA2O43364 AL589765.3-201ENST00000446084 462 ntBASIC6.12□□□□□ -1.43
HOXA2O43364 AL136097.1-201ENST00000456945 913 ntBASIC6.12□□□□□ -1.43
HOXA2O43364 RN7SL172P-201ENST00000460535 303 ntBASIC6.12□□□□□ -1.43
HOXA2O43364 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC6.12□□□□□ -1.43
HOXA2O43364 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
HOXA2O43364 MRPS33P2-201ENST00000507850 322 ntBASIC6.12□□□□□ -1.43
HOXA2O43364 RNU6-840P-201ENST00000517275 65 ntBASIC6.12□□□□□ -1.43
HOXA2O43364 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.12□□□□□ -1.43
HOXA2O43364 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC6.12□□□□□ -1.43
HOXA2O43364 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC6.12□□□□□ -1.43
HOXA2O43364 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC6.12□□□□□ -1.43
HOXA2O43364 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HOXA2O43364 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC6.12□□□□□ -1.43
HOXA2O43364 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC6.12□□□□□ -1.43
HOXA2O43364 AC012616.1-201ENST00000600294 197 ntBASIC6.12□□□□□ -1.43
HOXA2O43364 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC6.12□□□□□ -1.43
HOXA2O43364 MIR376A1-201ENST00000616574 68 ntBASIC6.12□□□□□ -1.43
HOXA2O43364 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HOXA2O43364 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HOXA2O43364 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HOXA2O43364 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.12□□□□□ -1.43
HOXA2O43364 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HOXA2O43364 AC007938.2-201ENST00000604666 2634 ntBASIC6.12□□□□□ -1.43
HOXA2O43364 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC6.12□□□□□ -1.43
HOXA2O43364 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
HOXA2O43364 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.11□□□□□ -1.43
HOXA2O43364 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
HOXA2O43364 AP000560.1-201ENST00000624150 1937 ntBASIC6.11□□□□□ -1.43
HOXA2O43364 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
HOXA2O43364 ZNF285B-201ENST00000561698 1767 ntBASIC6.11□□□□□ -1.43
HOXA2O43364 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
HOXA2O43364 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HOXA2O43364 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
HOXA2O43364 Y_RNA.324-201ENST00000365165 102 ntBASIC6.11□□□□□ -1.43
HOXA2O43364 RNU6-146P-201ENST00000384602 108 ntBASIC6.11□□□□□ -1.43
HOXA2O43364 MIR551A-201ENST00000385042 96 ntBASIC6.11□□□□□ -1.43
HOXA2O43364 MIR130A-201ENST00000385274 89 ntBASIC6.11□□□□□ -1.43
HOXA2O43364 MIR1250-201ENST00000408098 113 ntBASIC6.11□□□□□ -1.43
HOXA2O43364 RNU6ATAC18P-201ENST00000408413 101 ntBASIC6.11□□□□□ -1.43
HOXA2O43364 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.11□□□□□ -1.43
HOXA2O43364 MTCO3P29-201ENST00000432119 779 ntBASIC6.11□□□□□ -1.43
HOXA2O43364 AL445305.1-201ENST00000432577 575 ntBASIC6.11□□□□□ -1.43
HOXA2O43364 RPL12P46-201ENST00000436610 195 ntBASIC6.11□□□□□ -1.43
HOXA2O43364 RPL29P29-201ENST00000448725 423 ntBASIC6.11□□□□□ -1.43
HOXA2O43364 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC6.11□□□□□ -1.43
HOXA2O43364 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC6.11□□□□□ -1.43
HOXA2O43364 RNU6-941P-201ENST00000516346 108 ntBASIC6.11□□□□□ -1.43
HOXA2O43364 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC6.11□□□□□ -1.43
HOXA2O43364 AC107918.3-201ENST00000533272 382 ntBASIC6.11□□□□□ -1.43
HOXA2O43364 AC027667.1-201ENST00000545814 304 ntBASIC6.11□□□□□ -1.43
HOXA2O43364 PYM1-205ENST00000547925 499 ntTSL 3 BASIC6.11□□□□□ -1.43
HOXA2O43364 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC6.11□□□□□ -1.43
HOXA2O43364 AC010620.2-201ENST00000600135 313 ntBASIC6.11□□□□□ -1.43
HOXA2O43364 AL121917.1-203ENST00000605534 577 ntBASIC6.11□□□□□ -1.43
HOXA2O43364 SNORD91B-202ENST00000608459 222 ntBASIC6.11□□□□□ -1.43
HOXA2O43364 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC6.11□□□□□ -1.43
HOXA2O43364 AC243829.7-201ENST00000633081 225 ntBASIC6.11□□□□□ -1.43
HOXA2O43364 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.11□□□□□ -1.43
HOXA2O43364 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
HOXA2O43364 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HOXA2O43364 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.11□□□□□ -1.43
HOXA2O43364 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HOXA2O43364 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
HOXA2O43364 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.11□□□□□ -1.43
HOXA2O43364 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HOXA2O43364 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.1□□□□□ -1.43
HOXA2O43364 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
HOXA2O43364 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXA2O43364 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.1□□□□□ -1.43
HOXA2O43364 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
HOXA2O43364 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXA2O43364 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXA2O43364 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXA2O43364 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXA2O43364 snoU2_19.2-201ENST00000363024 80 ntBASIC6.1□□□□□ -1.43
HOXA2O43364 RNU6-595P-201ENST00000363944 107 ntBASIC6.1□□□□□ -1.43
HOXA2O43364 SNORA58B-201ENST00000364259 136 ntBASIC6.1□□□□□ -1.43
HOXA2O43364 RNU6-708P-201ENST00000384217 107 ntBASIC6.1□□□□□ -1.43
HOXA2O43364 Y_RNA.506-201ENST00000384494 102 ntBASIC6.1□□□□□ -1.43
HOXA2O43364 AL121835.1-201ENST00000404250 354 ntBASIC6.1□□□□□ -1.43
HOXA2O43364 GNG5P5-201ENST00000420444 220 ntBASIC6.1□□□□□ -1.43
HOXA2O43364 RPS27P18-201ENST00000431701 247 ntBASIC6.1□□□□□ -1.43
HOXA2O43364 ELOCP18-201ENST00000434209 337 ntBASIC6.1□□□□□ -1.43
HOXA2O43364 MRPL48P1-201ENST00000445390 636 ntBASIC6.1□□□□□ -1.43
HOXA2O43364 RNU6-1037P-201ENST00000459571 107 ntBASIC6.1□□□□□ -1.43
HOXA2O43364 RN7SL727P-201ENST00000482164 296 ntBASIC6.1□□□□□ -1.43
HOXA2O43364 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.1□□□□□ -1.43
HOXA2O43364 RNU6-1338P-201ENST00000516328 91 ntBASIC6.1□□□□□ -1.43
HOXA2O43364 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms