Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.65
CCDC163A0A0D9SF12 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC163A0A0D9SF12 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.71□□□□□ -1.66
CCDC163A0A0D9SF12 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC163A0A0D9SF12 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC163A0A0D9SF12 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC163A0A0D9SF12 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC163A0A0D9SF12 API5P2-201ENST00000397055 1498 ntBASIC4.71□□□□□ -1.66
CCDC163A0A0D9SF12 MTND4P29-201ENST00000503122 1372 ntBASIC4.71□□□□□ -1.66
CCDC163A0A0D9SF12 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
CCDC163A0A0D9SF12 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CCDC163A0A0D9SF12 RNU6-797P-201ENST00000363101 109 ntBASIC4.71□□□□□ -1.66
CCDC163A0A0D9SF12 RNU6-173P-201ENST00000364215 104 ntBASIC4.71□□□□□ -1.66
CCDC163A0A0D9SF12 RNU4-66P-201ENST00000365199 138 ntBASIC4.71□□□□□ -1.66
CCDC163A0A0D9SF12 RNU6-946P-201ENST00000383878 107 ntBASIC4.71□□□□□ -1.66
CCDC163A0A0D9SF12 RNU6-76P-201ENST00000384060 104 ntBASIC4.71□□□□□ -1.66
CCDC163A0A0D9SF12 RNU6-1009P-201ENST00000390996 107 ntBASIC4.71□□□□□ -1.66
CCDC163A0A0D9SF12 AL445189.1-201ENST00000405722 338 ntBASIC4.71□□□□□ -1.66
CCDC163A0A0D9SF12 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC163A0A0D9SF12 TOMM22P1-201ENST00000418578 312 ntBASIC4.71□□□□□ -1.66
CCDC163A0A0D9SF12 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC4.71□□□□□ -1.66
CCDC163A0A0D9SF12 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC163A0A0D9SF12 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC163A0A0D9SF12 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC163A0A0D9SF12 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC163A0A0D9SF12 CYCSP34-201ENST00000458172 304 ntBASIC4.71□□□□□ -1.66
CCDC163A0A0D9SF12 RPL23AP2-201ENST00000471227 466 ntBASIC4.71□□□□□ -1.66
CCDC163A0A0D9SF12 RN7SL817P-201ENST00000480777 288 ntBASIC4.71□□□□□ -1.66
CCDC163A0A0D9SF12 RN7SL810P-201ENST00000493031 276 ntBASIC4.71□□□□□ -1.66
CCDC163A0A0D9SF12 AC104806.1-201ENST00000508720 308 ntBASIC4.71□□□□□ -1.66
CCDC163A0A0D9SF12 RNU4-29P-201ENST00000515943 174 ntBASIC4.71□□□□□ -1.66
CCDC163A0A0D9SF12 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.71□□□□□ -1.66
CCDC163A0A0D9SF12 RN7SKP219-201ENST00000516825 296 ntBASIC4.71□□□□□ -1.66
CCDC163A0A0D9SF12 IGKV2D-23-201ENST00000518179 286 ntBASIC4.71□□□□□ -1.66
CCDC163A0A0D9SF12 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC163A0A0D9SF12 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC163A0A0D9SF12 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CCDC163A0A0D9SF12 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.71□□□□□ -1.66
CCDC163A0A0D9SF12 MTCYBP13-201ENST00000578634 1093 ntBASIC4.71□□□□□ -1.66
CCDC163A0A0D9SF12 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC163A0A0D9SF12 SDR42E1P2-201ENST00000614861 481 ntBASIC4.71□□□□□ -1.66
CCDC163A0A0D9SF12 AC010133.1-201ENST00000615809 842 ntBASIC4.71□□□□□ -1.66
CCDC163A0A0D9SF12 AL353748.2-201ENST00000622148 471 ntBASIC4.71□□□□□ -1.66
CCDC163A0A0D9SF12 U3.53-201ENST00000628922 216 ntBASIC4.71□□□□□ -1.66
CCDC163A0A0D9SF12 AC139769.1-204ENST00000472297 1931 ntBASIC4.71□□□□□ -1.66
CCDC163A0A0D9SF12 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.71□□□□□ -1.66
CCDC163A0A0D9SF12 AC018529.3-201ENST00000624212 2254 ntBASIC4.71□□□□□ -1.66
CCDC163A0A0D9SF12 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC163A0A0D9SF12 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC163A0A0D9SF12 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC163A0A0D9SF12 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.71□□□□□ -1.66
CCDC163A0A0D9SF12 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC163A0A0D9SF12 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC163A0A0D9SF12 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC163A0A0D9SF12 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC163A0A0D9SF12 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC163A0A0D9SF12 SNORA7.2-201ENST00000364446 145 ntBASIC4.7□□□□□ -1.66
CCDC163A0A0D9SF12 SMIM11P1-201ENST00000369586 178 ntBASIC4.7□□□□□ -1.66
CCDC163A0A0D9SF12 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC163A0A0D9SF12 UBE2V1P2-201ENST00000397758 440 ntBASIC4.7□□□□□ -1.66
CCDC163A0A0D9SF12 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC163A0A0D9SF12 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.7□□□□□ -1.66
CCDC163A0A0D9SF12 DUTP6-201ENST00000425573 462 ntBASIC4.7□□□□□ -1.66
CCDC163A0A0D9SF12 AC008850.1-201ENST00000427546 362 ntBASIC4.7□□□□□ -1.66
CCDC163A0A0D9SF12 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.7□□□□□ -1.66
CCDC163A0A0D9SF12 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC163A0A0D9SF12 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC163A0A0D9SF12 CBWD4P-201ENST00000445695 655 ntBASIC4.7□□□□□ -1.66
CCDC163A0A0D9SF12 AL031584.1-201ENST00000447169 754 ntBASIC4.7□□□□□ -1.66
CCDC163A0A0D9SF12 MTND3P16-201ENST00000452205 344 ntBASIC4.7□□□□□ -1.66
CCDC163A0A0D9SF12 AC021660.1-201ENST00000465006 554 ntBASIC4.7□□□□□ -1.66
CCDC163A0A0D9SF12 RPL36AP41-201ENST00000493820 306 ntBASIC4.7□□□□□ -1.66
CCDC163A0A0D9SF12 MTCO2P30-201ENST00000503662 364 ntBASIC4.7□□□□□ -1.66
CCDC163A0A0D9SF12 AC139783.2-201ENST00000504847 1145 ntBASIC4.7□□□□□ -1.66
CCDC163A0A0D9SF12 AC010486.1-201ENST00000511793 424 ntBASIC4.7□□□□□ -1.66
CCDC163A0A0D9SF12 AC026402.1-201ENST00000513642 170 ntBASIC4.7□□□□□ -1.66
CCDC163A0A0D9SF12 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.7□□□□□ -1.66
CCDC163A0A0D9SF12 MTCO1P35-201ENST00000515270 228 ntBASIC4.7□□□□□ -1.66
CCDC163A0A0D9SF12 RNA5SP309-201ENST00000516670 106 ntBASIC4.7□□□□□ -1.66
CCDC163A0A0D9SF12 RNU6-709P-201ENST00000517257 104 ntBASIC4.7□□□□□ -1.66
CCDC163A0A0D9SF12 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC163A0A0D9SF12 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC163A0A0D9SF12 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC163A0A0D9SF12 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC163A0A0D9SF12 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.7□□□□□ -1.66
CCDC163A0A0D9SF12 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC163A0A0D9SF12 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC163A0A0D9SF12 DPPA3P3-201ENST00000603842 430 ntBASIC4.7□□□□□ -1.66
CCDC163A0A0D9SF12 AL670379.4-201ENST00000605279 254 ntBASIC4.7□□□□□ -1.66
CCDC163A0A0D9SF12 AC093913.1-201ENST00000614178 329 ntBASIC4.7□□□□□ -1.66
CCDC163A0A0D9SF12 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC4.7□□□□□ -1.66
CCDC163A0A0D9SF12 AL359314.1-201ENST00000616913 261 ntBASIC4.7□□□□□ -1.66
CCDC163A0A0D9SF12 AC011155.2-201ENST00000623202 216 ntBASIC4.7□□□□□ -1.66
CCDC163A0A0D9SF12 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC163A0A0D9SF12 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC163A0A0D9SF12 AC099654.5-201ENST00000636479 350 ntBASIC4.7□□□□□ -1.66
CCDC163A0A0D9SF12 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC163A0A0D9SF12 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC163A0A0D9SF12 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
CCDC163A0A0D9SF12 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms