Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC5.69□□□□□ -1.5
ATG3Q9NT62 RN7SL542P-201ENST00000467147 294 ntBASIC5.69□□□□□ -1.5
ATG3Q9NT62 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
ATG3Q9NT62 AC012181.1-201ENST00000479895 423 ntBASIC5.69□□□□□ -1.5
ATG3Q9NT62 RN7SL817P-201ENST00000480777 288 ntBASIC5.69□□□□□ -1.5
ATG3Q9NT62 AL132838.2-201ENST00000492041 314 ntBASIC5.69□□□□□ -1.5
ATG3Q9NT62 RPS27AP13-201ENST00000498403 237 ntBASIC5.69□□□□□ -1.5
ATG3Q9NT62 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC5.69□□□□□ -1.5
ATG3Q9NT62 NARSP2-201ENST00000518524 679 ntBASIC5.69□□□□□ -1.5
ATG3Q9NT62 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC5.69□□□□□ -1.5
ATG3Q9NT62 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC5.69□□□□□ -1.5
ATG3Q9NT62 AC008269.2-201ENST00000561915 1105 ntBASIC5.69□□□□□ -1.5
ATG3Q9NT62 AC099489.2-201ENST00000574976 260 ntBASIC5.69□□□□□ -1.5
ATG3Q9NT62 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC5.69□□□□□ -1.5
ATG3Q9NT62 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC5.69□□□□□ -1.5
ATG3Q9NT62 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC5.69□□□□□ -1.5
ATG3Q9NT62 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.69□□□□□ -1.5
ATG3Q9NT62 AC018926.3-201ENST00000618841 406 ntBASIC5.69□□□□□ -1.5
ATG3Q9NT62 U4.1-201ENST00000620349 87 ntBASIC5.69□□□□□ -1.5
ATG3Q9NT62 AC112484.5-201ENST00000624189 228 ntBASIC5.69□□□□□ -1.5
ATG3Q9NT62 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ATG3Q9NT62 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC5.69□□□□□ -1.5
ATG3Q9NT62 AC134882.1-201ENST00000603738 1676 ntBASIC5.69□□□□□ -1.5
ATG3Q9NT62 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
ATG3Q9NT62 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
ATG3Q9NT62 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
ATG3Q9NT62 AC119744.1-201ENST00000454746 1715 ntBASIC5.68□□□□□ -1.5
ATG3Q9NT62 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ATG3Q9NT62 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
ATG3Q9NT62 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
ATG3Q9NT62 RNU6-169P-201ENST00000365336 107 ntBASIC5.68□□□□□ -1.5
ATG3Q9NT62 BTBD10P2-201ENST00000404779 676 ntBASIC5.68□□□□□ -1.5
ATG3Q9NT62 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.68□□□□□ -1.5
ATG3Q9NT62 RNU2-3P-201ENST00000410144 191 ntBASIC5.68□□□□□ -1.5
ATG3Q9NT62 Y_RNA.618-201ENST00000410949 107 ntBASIC5.68□□□□□ -1.5
ATG3Q9NT62 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.68□□□□□ -1.5
ATG3Q9NT62 HSPE1P1-201ENST00000421494 318 ntBASIC5.68□□□□□ -1.5
ATG3Q9NT62 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC5.68□□□□□ -1.5
ATG3Q9NT62 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
ATG3Q9NT62 SNRPEP7-201ENST00000438350 220 ntBASIC5.68□□□□□ -1.5
ATG3Q9NT62 AC114495.1-201ENST00000441274 436 ntBASIC5.68□□□□□ -1.5
ATG3Q9NT62 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC5.68□□□□□ -1.5
ATG3Q9NT62 AL136380.1-201ENST00000447970 162 ntBASIC5.68□□□□□ -1.5
ATG3Q9NT62 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.68□□□□□ -1.5
ATG3Q9NT62 RPS4XP10-201ENST00000465034 731 ntBASIC5.68□□□□□ -1.5
ATG3Q9NT62 AC078785.3-201ENST00000476607 425 ntBASIC5.68□□□□□ -1.5
ATG3Q9NT62 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC5.68□□□□□ -1.5
ATG3Q9NT62 AC093303.1-201ENST00000514549 295 ntBASIC5.68□□□□□ -1.5
ATG3Q9NT62 RNU6-1271P-201ENST00000517049 105 ntBASIC5.68□□□□□ -1.5
ATG3Q9NT62 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
ATG3Q9NT62 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC5.68□□□□□ -1.5
ATG3Q9NT62 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.68□□□□□ -1.5
ATG3Q9NT62 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.68□□□□□ -1.5
ATG3Q9NT62 MIR3158-1-201ENST00000583596 81 ntBASIC5.68□□□□□ -1.5
ATG3Q9NT62 APOOP1-201ENST00000604695 592 ntBASIC5.68□□□□□ -1.5
ATG3Q9NT62 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC5.68□□□□□ -1.5
ATG3Q9NT62 AC123768.4-201ENST00000616244 701 ntBASIC5.68□□□□□ -1.5
ATG3Q9NT62 AC006133.1-201ENST00000617106 264 ntBASIC5.68□□□□□ -1.5
ATG3Q9NT62 OFD1P5Y-201ENST00000447585 2590 ntBASIC5.68□□□□□ -1.5
ATG3Q9NT62 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.68□□□□□ -1.5
ATG3Q9NT62 CD36-221ENST00000534394 1741 ntTSL 2 BASIC5.68□□□□□ -1.5
ATG3Q9NT62 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ATG3Q9NT62 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ATG3Q9NT62 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC5.67□□□□□ -1.5
ATG3Q9NT62 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
ATG3Q9NT62 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.67□□□□□ -1.5
ATG3Q9NT62 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
ATG3Q9NT62 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
ATG3Q9NT62 AC046144.1-201ENST00000478559 1853 ntBASIC5.67□□□□□ -1.5
ATG3Q9NT62 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.67□□□□□ -1.5
ATG3Q9NT62 OR1S2-201ENST00000302592 978 ntBASIC5.67□□□□□ -1.5
ATG3Q9NT62 SNORA63.7-201ENST00000365579 123 ntBASIC5.67□□□□□ -1.5
ATG3Q9NT62 RNU6-628P-201ENST00000410675 107 ntBASIC5.67□□□□□ -1.5
ATG3Q9NT62 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
ATG3Q9NT62 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC5.67□□□□□ -1.5
ATG3Q9NT62 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC5.67□□□□□ -1.5
ATG3Q9NT62 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC5.67□□□□□ -1.5
ATG3Q9NT62 RPS27AP15-201ENST00000447672 466 ntBASIC5.67□□□□□ -1.5
ATG3Q9NT62 RNU7-136P-201ENST00000458819 69 ntBASIC5.67□□□□□ -1.5
ATG3Q9NT62 AC106872.2-201ENST00000494303 480 ntBASIC5.67□□□□□ -1.5
ATG3Q9NT62 APOOP3-201ENST00000536787 586 ntBASIC5.67□□□□□ -1.5
ATG3Q9NT62 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC5.67□□□□□ -1.5
ATG3Q9NT62 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC5.67□□□□□ -1.5
ATG3Q9NT62 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.67□□□□□ -1.5
ATG3Q9NT62 AC123904.2-201ENST00000548059 300 ntBASIC5.67□□□□□ -1.5
ATG3Q9NT62 AC090502.2-201ENST00000549267 280 ntBASIC5.67□□□□□ -1.5
ATG3Q9NT62 HMGB1P6-201ENST00000569046 646 ntBASIC5.67□□□□□ -1.5
ATG3Q9NT62 MIR4444-1-201ENST00000581696 74 ntBASIC5.67□□□□□ -1.5
ATG3Q9NT62 MIR4444-2-201ENST00000584390 74 ntBASIC5.67□□□□□ -1.5
ATG3Q9NT62 AL354984.3-201ENST00000604803 325 ntBASIC5.67□□□□□ -1.5
ATG3Q9NT62 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC5.67□□□□□ -1.5
ATG3Q9NT62 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
ATG3Q9NT62 USP9YP4-201ENST00000424401 1745 ntBASIC5.67□□□□□ -1.5
ATG3Q9NT62 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
ATG3Q9NT62 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC5.67□□□□□ -1.5
ATG3Q9NT62 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
ATG3Q9NT62 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
ATG3Q9NT62 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC5.67□□□□□ -1.5
ATG3Q9NT62 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
ATG3Q9NT62 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms