Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
EBF3Q9H4W6 AL359535.1-201ENST00000612100 1087 ntBASIC4.01□□□□□ -1.77
EBF3Q9H4W6 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.01□□□□□ -1.77
EBF3Q9H4W6 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.01□□□□□ -1.77
EBF3Q9H4W6 FER-210ENST00000628534 558 ntTSL 5 BASIC4.01□□□□□ -1.77
EBF3Q9H4W6 MTND1P37-201ENST00000636562 264 ntBASIC4.01□□□□□ -1.77
EBF3Q9H4W6 LRRC77P-213ENST00000637727 880 ntBASIC4.01□□□□□ -1.77
EBF3Q9H4W6 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.01□□□□□ -1.77
EBF3Q9H4W6 AL161912.2-201ENST00000565707 3007 ntBASIC4.01□□□□□ -1.77
EBF3Q9H4W6 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
EBF3Q9H4W6 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
EBF3Q9H4W6 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
EBF3Q9H4W6 AC114546.3-201ENST00000623582 1734 ntBASIC4.01□□□□□ -1.77
EBF3Q9H4W6 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
EBF3Q9H4W6 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.01□□□□□ -1.77
EBF3Q9H4W6 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4□□□□□ -1.77
EBF3Q9H4W6 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4□□□□□ -1.77
EBF3Q9H4W6 AC006026.1-201ENST00000444025 1803 ntBASIC4□□□□□ -1.77
EBF3Q9H4W6 NCAPGP1-201ENST00000505112 1814 ntBASIC4□□□□□ -1.77
EBF3Q9H4W6 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
EBF3Q9H4W6 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4□□□□□ -1.77
EBF3Q9H4W6 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
EBF3Q9H4W6 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4□□□□□ -1.77
EBF3Q9H4W6 SNRPEP3-201ENST00000338402 276 ntBASIC4□□□□□ -1.77
EBF3Q9H4W6 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4□□□□□ -1.77
EBF3Q9H4W6 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
EBF3Q9H4W6 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4□□□□□ -1.77
EBF3Q9H4W6 RNU6-1279P-201ENST00000383917 103 ntBASIC4□□□□□ -1.77
EBF3Q9H4W6 RNU6-444P-201ENST00000383988 108 ntBASIC4□□□□□ -1.77
EBF3Q9H4W6 RNU6-116P-201ENST00000384042 109 ntBASIC4□□□□□ -1.77
EBF3Q9H4W6 MTCO3P40-201ENST00000392516 676 ntBASIC4□□□□□ -1.77
EBF3Q9H4W6 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4□□□□□ -1.77
EBF3Q9H4W6 RHEBP3-201ENST00000411920 351 ntBASIC4□□□□□ -1.77
EBF3Q9H4W6 AC109780.2-201ENST00000413467 845 ntBASIC4□□□□□ -1.77
EBF3Q9H4W6 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4□□□□□ -1.77
EBF3Q9H4W6 NUP35P2-201ENST00000416748 943 ntBASIC4□□□□□ -1.77
EBF3Q9H4W6 AC068533.1-201ENST00000418542 415 ntBASIC4□□□□□ -1.77
EBF3Q9H4W6 AL591419.1-201ENST00000427423 339 ntBASIC4□□□□□ -1.77
EBF3Q9H4W6 ELOCP14-201ENST00000428070 331 ntBASIC4□□□□□ -1.77
EBF3Q9H4W6 MTCYBP45-201ENST00000435243 565 ntBASIC4□□□□□ -1.77
EBF3Q9H4W6 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4□□□□□ -1.77
EBF3Q9H4W6 ELOCP7-201ENST00000439968 331 ntBASIC4□□□□□ -1.77
EBF3Q9H4W6 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4□□□□□ -1.77
EBF3Q9H4W6 MTND5P14-201ENST00000441481 1267 ntBASIC4□□□□□ -1.77
EBF3Q9H4W6 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC4□□□□□ -1.77
EBF3Q9H4W6 RPL39P6-201ENST00000448289 150 ntBASIC4□□□□□ -1.77
EBF3Q9H4W6 TRGVB-201ENST00000453257 471 ntBASIC4□□□□□ -1.77
EBF3Q9H4W6 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC4□□□□□ -1.77
EBF3Q9H4W6 BX322784.1-201ENST00000455793 1077 ntBASIC4□□□□□ -1.77
EBF3Q9H4W6 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4□□□□□ -1.77
EBF3Q9H4W6 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4□□□□□ -1.77
EBF3Q9H4W6 RPL7P24-201ENST00000493052 752 ntBASIC4□□□□□ -1.77
EBF3Q9H4W6 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC4□□□□□ -1.77
EBF3Q9H4W6 UBE2CP3-201ENST00000502715 450 ntBASIC4□□□□□ -1.77
EBF3Q9H4W6 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4□□□□□ -1.77
EBF3Q9H4W6 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
EBF3Q9H4W6 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4□□□□□ -1.77
EBF3Q9H4W6 AC009646.1-201ENST00000510455 318 ntBASIC4□□□□□ -1.77
EBF3Q9H4W6 IGKV2-38-201ENST00000517443 247 ntBASIC4□□□□□ -1.77
EBF3Q9H4W6 SOD1P3-201ENST00000518682 454 ntBASIC4□□□□□ -1.77
EBF3Q9H4W6 AC022695.1-201ENST00000522089 237 ntBASIC4□□□□□ -1.77
EBF3Q9H4W6 AP000790.1-201ENST00000528891 737 ntBASIC4□□□□□ -1.77
EBF3Q9H4W6 OR5AL2P-201ENST00000532185 920 ntBASIC4□□□□□ -1.77
EBF3Q9H4W6 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4□□□□□ -1.77
EBF3Q9H4W6 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC4□□□□□ -1.77
EBF3Q9H4W6 MIR5697-201ENST00000578045 78 ntBASIC4□□□□□ -1.77
EBF3Q9H4W6 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4□□□□□ -1.77
EBF3Q9H4W6 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4□□□□□ -1.77
EBF3Q9H4W6 AC078795.3-201ENST00000602913 472 ntBASIC4□□□□□ -1.77
EBF3Q9H4W6 AC104662.1-201ENST00000604448 511 ntBASIC4□□□□□ -1.77
EBF3Q9H4W6 UBE2Q2P2-203ENST00000613592 761 ntBASIC4□□□□□ -1.77
EBF3Q9H4W6 AL391261.4-201ENST00000616012 481 ntBASIC4□□□□□ -1.77
EBF3Q9H4W6 AC136475.10-201ENST00000620253 385 ntBASIC4□□□□□ -1.77
EBF3Q9H4W6 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC4□□□□□ -1.77
EBF3Q9H4W6 AC010338.1-201ENST00000621823 717 ntBASIC4□□□□□ -1.77
EBF3Q9H4W6 AL359880.1-201ENST00000621879 266 ntBASIC4□□□□□ -1.77
EBF3Q9H4W6 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4□□□□□ -1.77
EBF3Q9H4W6 ABBA01000935.2-201ENST00000637477 838 ntBASIC4□□□□□ -1.77
EBF3Q9H4W6 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4□□□□□ -1.77
EBF3Q9H4W6 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4□□□□□ -1.77
EBF3Q9H4W6 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4□□□□□ -1.77
EBF3Q9H4W6 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
EBF3Q9H4W6 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
EBF3Q9H4W6 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
EBF3Q9H4W6 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
EBF3Q9H4W6 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.99□□□□□ -1.77
EBF3Q9H4W6 OR11H5P-202ENST00000641612 1325 ntBASIC3.99□□□□□ -1.77
EBF3Q9H4W6 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
EBF3Q9H4W6 RNU6-534P-201ENST00000364877 106 ntBASIC3.99□□□□□ -1.77
EBF3Q9H4W6 RNU6-723P-201ENST00000383973 107 ntBASIC3.99□□□□□ -1.77
EBF3Q9H4W6 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
EBF3Q9H4W6 RNU6-1009P-201ENST00000390996 107 ntBASIC3.99□□□□□ -1.77
EBF3Q9H4W6 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.99□□□□□ -1.77
EBF3Q9H4W6 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.99□□□□□ -1.77
EBF3Q9H4W6 AL139247.1-201ENST00000422768 325 ntBASIC3.99□□□□□ -1.77
EBF3Q9H4W6 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.99□□□□□ -1.77
EBF3Q9H4W6 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
EBF3Q9H4W6 AL451074.3-201ENST00000437709 472 ntBASIC3.99□□□□□ -1.77
EBF3Q9H4W6 AL033528.1-201ENST00000453780 140 ntBASIC3.99□□□□□ -1.77
EBF3Q9H4W6 RPS3AP14-201ENST00000483907 780 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 171.3 ms