Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AC233309.1-201ENST00000619522 751 ntBASIC4.48□□□□□ -1.69
CDK5RAP3Q96JB5 SEPT14P19-203ENST00000633205 211 ntBASIC4.48□□□□□ -1.69
CDK5RAP3Q96JB5 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CDK5RAP3Q96JB5 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CDK5RAP3Q96JB5 RLIMP1-201ENST00000339626 1680 ntBASIC4.48□□□□□ -1.69
CDK5RAP3Q96JB5 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CDK5RAP3Q96JB5 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CDK5RAP3Q96JB5 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CDK5RAP3Q96JB5 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CDK5RAP3Q96JB5 RNU6-600P-201ENST00000362524 99 ntBASIC4.47□□□□□ -1.69
CDK5RAP3Q96JB5 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CDK5RAP3Q96JB5 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.47□□□□□ -1.69
CDK5RAP3Q96JB5 AMD1P2-201ENST00000412936 992 ntBASIC4.47□□□□□ -1.69
CDK5RAP3Q96JB5 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.47□□□□□ -1.69
CDK5RAP3Q96JB5 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.47□□□□□ -1.69
CDK5RAP3Q96JB5 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.47□□□□□ -1.69
CDK5RAP3Q96JB5 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.47□□□□□ -1.69
CDK5RAP3Q96JB5 AL358934.1-201ENST00000432346 324 ntBASIC4.47□□□□□ -1.69
CDK5RAP3Q96JB5 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.47□□□□□ -1.69
CDK5RAP3Q96JB5 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC4.47□□□□□ -1.69
CDK5RAP3Q96JB5 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.47□□□□□ -1.69
CDK5RAP3Q96JB5 AL162151.2-201ENST00000448875 158 ntBASIC4.47□□□□□ -1.69
CDK5RAP3Q96JB5 RPS11P1-201ENST00000451072 473 ntBASIC4.47□□□□□ -1.69
CDK5RAP3Q96JB5 MTCO3P20-201ENST00000454926 688 ntBASIC4.47□□□□□ -1.69
CDK5RAP3Q96JB5 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC4.47□□□□□ -1.69
CDK5RAP3Q96JB5 OFD1P4Y-201ENST00000455273 1179 ntBASIC4.47□□□□□ -1.69
CDK5RAP3Q96JB5 AC093899.1-201ENST00000457984 376 ntBASIC4.47□□□□□ -1.69
CDK5RAP3Q96JB5 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.47□□□□□ -1.69
CDK5RAP3Q96JB5 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.47□□□□□ -1.69
CDK5RAP3Q96JB5 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CDK5RAP3Q96JB5 AC055855.1-201ENST00000489563 579 ntBASIC4.47□□□□□ -1.69
CDK5RAP3Q96JB5 RPL9P6-201ENST00000492764 598 ntBASIC4.47□□□□□ -1.69
CDK5RAP3Q96JB5 RPL23AP55-201ENST00000498163 452 ntBASIC4.47□□□□□ -1.69
CDK5RAP3Q96JB5 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.47□□□□□ -1.69
CDK5RAP3Q96JB5 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
CDK5RAP3Q96JB5 AC091133.4-201ENST00000511142 308 ntBASIC4.47□□□□□ -1.69
CDK5RAP3Q96JB5 NDUFB4P9-201ENST00000511646 388 ntBASIC4.47□□□□□ -1.69
CDK5RAP3Q96JB5 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.47□□□□□ -1.69
CDK5RAP3Q96JB5 MTCO1P35-201ENST00000515270 228 ntBASIC4.47□□□□□ -1.69
CDK5RAP3Q96JB5 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.47□□□□□ -1.69
CDK5RAP3Q96JB5 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CDK5RAP3Q96JB5 CR383656.7-201ENST00000548164 174 ntBASIC4.47□□□□□ -1.69
CDK5RAP3Q96JB5 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC4.47□□□□□ -1.69
CDK5RAP3Q96JB5 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.47□□□□□ -1.69
CDK5RAP3Q96JB5 PARP1P2-201ENST00000556806 195 ntBASIC4.47□□□□□ -1.69
CDK5RAP3Q96JB5 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC4.47□□□□□ -1.69
CDK5RAP3Q96JB5 AC007687.1-201ENST00000602704 304 ntBASIC4.47□□□□□ -1.69
CDK5RAP3Q96JB5 AL031176.1-201ENST00000604554 466 ntBASIC4.47□□□□□ -1.69
CDK5RAP3Q96JB5 MIR6867-201ENST00000610636 67 ntBASIC4.47□□□□□ -1.69
CDK5RAP3Q96JB5 AL732618.1-201ENST00000623251 301 ntBASIC4.47□□□□□ -1.69
CDK5RAP3Q96JB5 AC112204.3-201ENST00000623822 332 ntBASIC4.47□□□□□ -1.69
CDK5RAP3Q96JB5 AC068880.5-201ENST00000624331 290 ntBASIC4.47□□□□□ -1.69
CDK5RAP3Q96JB5 AC112200.1-201ENST00000625015 234 ntBASIC4.47□□□□□ -1.69
CDK5RAP3Q96JB5 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
CDK5RAP3Q96JB5 AC024560.2-201ENST00000507981 1497 ntBASIC4.47□□□□□ -1.69
CDK5RAP3Q96JB5 MAPK10-373ENST00000641983 6772 ntBASIC4.47□□□□□ -1.69
CDK5RAP3Q96JB5 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CDK5RAP3Q96JB5 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.46□□□□□ -1.69
CDK5RAP3Q96JB5 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.69
CDK5RAP3Q96JB5 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
CDK5RAP3Q96JB5 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CDK5RAP3Q96JB5 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.46□□□□□ -1.7
CDK5RAP3Q96JB5 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.46□□□□□ -1.7
CDK5RAP3Q96JB5 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.46□□□□□ -1.7
CDK5RAP3Q96JB5 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CDK5RAP3Q96JB5 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.46□□□□□ -1.7
CDK5RAP3Q96JB5 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CDK5RAP3Q96JB5 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CDK5RAP3Q96JB5 RNA5SP399-201ENST00000364003 117 ntBASIC4.46□□□□□ -1.7
CDK5RAP3Q96JB5 SNORA70.2-201ENST00000364506 135 ntBASIC4.46□□□□□ -1.7
CDK5RAP3Q96JB5 Y_RNA.296-201ENST00000364930 108 ntBASIC4.46□□□□□ -1.7
CDK5RAP3Q96JB5 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.46□□□□□ -1.7
CDK5RAP3Q96JB5 RNA5SP317-201ENST00000410176 116 ntBASIC4.46□□□□□ -1.7
CDK5RAP3Q96JB5 RNU2-8P-201ENST00000410727 190 ntBASIC4.46□□□□□ -1.7
CDK5RAP3Q96JB5 RNA5SP311-201ENST00000411290 116 ntBASIC4.46□□□□□ -1.7
CDK5RAP3Q96JB5 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4.46□□□□□ -1.7
CDK5RAP3Q96JB5 AC087650.1-201ENST00000431445 468 ntBASIC4.46□□□□□ -1.7
CDK5RAP3Q96JB5 MTND4LP10-201ENST00000435146 291 ntBASIC4.46□□□□□ -1.7
CDK5RAP3Q96JB5 HMGB1P37-201ENST00000439613 609 ntBASIC4.46□□□□□ -1.7
CDK5RAP3Q96JB5 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC4.46□□□□□ -1.7
CDK5RAP3Q96JB5 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.46□□□□□ -1.7
CDK5RAP3Q96JB5 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.46□□□□□ -1.7
CDK5RAP3Q96JB5 HMGN2P7-201ENST00000456186 273 ntBASIC4.46□□□□□ -1.7
CDK5RAP3Q96JB5 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.46□□□□□ -1.7
CDK5RAP3Q96JB5 RN7SL385P-201ENST00000468873 276 ntBASIC4.46□□□□□ -1.7
CDK5RAP3Q96JB5 RPL31P13-201ENST00000484151 370 ntBASIC4.46□□□□□ -1.7
CDK5RAP3Q96JB5 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.46□□□□□ -1.7
CDK5RAP3Q96JB5 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.46□□□□□ -1.7
CDK5RAP3Q96JB5 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.46□□□□□ -1.7
CDK5RAP3Q96JB5 RNA5SP315-201ENST00000516340 116 ntBASIC4.46□□□□□ -1.7
CDK5RAP3Q96JB5 RNU6-506P-201ENST00000516553 94 ntBASIC4.46□□□□□ -1.7
CDK5RAP3Q96JB5 RNU6-528P-201ENST00000516926 100 ntBASIC4.46□□□□□ -1.7
CDK5RAP3Q96JB5 RNA5SP312-201ENST00000517068 116 ntBASIC4.46□□□□□ -1.7
CDK5RAP3Q96JB5 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.46□□□□□ -1.7
CDK5RAP3Q96JB5 OR5G4P-201ENST00000525251 760 ntBASIC4.46□□□□□ -1.7
CDK5RAP3Q96JB5 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.46□□□□□ -1.7
CDK5RAP3Q96JB5 DEFB108A-201ENST00000530110 222 ntBASIC4.46□□□□□ -1.7
CDK5RAP3Q96JB5 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.46□□□□□ -1.7
CDK5RAP3Q96JB5 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.46□□□□□ -1.7
CDK5RAP3Q96JB5 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms