Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.94□□□□□ -1.78
CTHRC1Q96CG8 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
CTHRC1Q96CG8 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CTHRC1Q96CG8 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.94□□□□□ -1.78
CTHRC1Q96CG8 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CTHRC1Q96CG8 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.94□□□□□ -1.78
CTHRC1Q96CG8 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CTHRC1Q96CG8 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
CTHRC1Q96CG8 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
CTHRC1Q96CG8 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CTHRC1Q96CG8 RNU6-223P-201ENST00000362830 107 ntBASIC3.93□□□□□ -1.78
CTHRC1Q96CG8 SNORD56.2-201ENST00000363242 71 ntBASIC3.93□□□□□ -1.78
CTHRC1Q96CG8 RNU6-637P-201ENST00000384050 107 ntBASIC3.93□□□□□ -1.78
CTHRC1Q96CG8 RNU6-876P-201ENST00000391295 104 ntBASIC3.93□□□□□ -1.78
CTHRC1Q96CG8 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CTHRC1Q96CG8 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.93□□□□□ -1.78
CTHRC1Q96CG8 AC009237.5-201ENST00000414271 501 ntBASIC3.93□□□□□ -1.78
CTHRC1Q96CG8 AC138393.2-201ENST00000414742 246 ntBASIC3.93□□□□□ -1.78
CTHRC1Q96CG8 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.93□□□□□ -1.78
CTHRC1Q96CG8 BEND7P1-201ENST00000422058 457 ntBASIC3.93□□□□□ -1.78
CTHRC1Q96CG8 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.93□□□□□ -1.78
CTHRC1Q96CG8 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.93□□□□□ -1.78
CTHRC1Q96CG8 OR4K11P-201ENST00000431829 904 ntBASIC3.93□□□□□ -1.78
CTHRC1Q96CG8 MRPS18BP2-201ENST00000434310 759 ntBASIC3.93□□□□□ -1.78
CTHRC1Q96CG8 HLA-N-201ENST00000437516 135 ntBASIC3.93□□□□□ -1.78
CTHRC1Q96CG8 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.93□□□□□ -1.78
CTHRC1Q96CG8 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.93□□□□□ -1.78
CTHRC1Q96CG8 RPL21P89-201ENST00000444021 467 ntBASIC3.93□□□□□ -1.78
CTHRC1Q96CG8 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.93□□□□□ -1.78
CTHRC1Q96CG8 RNA5SP246-201ENST00000458909 119 ntBASIC3.93□□□□□ -1.78
CTHRC1Q96CG8 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.93□□□□□ -1.78
CTHRC1Q96CG8 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CTHRC1Q96CG8 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CTHRC1Q96CG8 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CTHRC1Q96CG8 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.93□□□□□ -1.78
CTHRC1Q96CG8 AC108043.1-201ENST00000512696 574 ntBASIC3.93□□□□□ -1.78
CTHRC1Q96CG8 AC099522.1-202ENST00000514718 367 ntBASIC3.93□□□□□ -1.78
CTHRC1Q96CG8 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.93□□□□□ -1.78
CTHRC1Q96CG8 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CTHRC1Q96CG8 RNU6-358P-201ENST00000516564 75 ntBASIC3.93□□□□□ -1.78
CTHRC1Q96CG8 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.93□□□□□ -1.78
CTHRC1Q96CG8 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.93□□□□□ -1.78
CTHRC1Q96CG8 PARP1P2-201ENST00000556806 195 ntBASIC3.93□□□□□ -1.78
CTHRC1Q96CG8 AC012417.1-201ENST00000582307 1039 ntBASIC3.93□□□□□ -1.78
CTHRC1Q96CG8 AC105224.1-201ENST00000587055 421 ntBASIC3.93□□□□□ -1.78
CTHRC1Q96CG8 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.93□□□□□ -1.78
CTHRC1Q96CG8 AC064801.1-201ENST00000612025 407 ntBASIC3.93□□□□□ -1.78
CTHRC1Q96CG8 AL020991.1-201ENST00000612314 373 ntBASIC3.93□□□□□ -1.78
CTHRC1Q96CG8 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.93□□□□□ -1.78
CTHRC1Q96CG8 AL445567.2-201ENST00000618935 498 ntBASIC3.93□□□□□ -1.78
CTHRC1Q96CG8 AC244100.1-202ENST00000621554 382 ntBASIC3.93□□□□□ -1.78
CTHRC1Q96CG8 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.93□□□□□ -1.78
CTHRC1Q96CG8 FER-210ENST00000628534 558 ntTSL 5 BASIC3.93□□□□□ -1.78
CTHRC1Q96CG8 MIR6715B-201ENST00000637172 77 ntBASIC3.93□□□□□ -1.78
CTHRC1Q96CG8 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
CTHRC1Q96CG8 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.93□□□□□ -1.78
CTHRC1Q96CG8 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.93□□□□□ -1.78
CTHRC1Q96CG8 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CTHRC1Q96CG8 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
CTHRC1Q96CG8 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
CTHRC1Q96CG8 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CTHRC1Q96CG8 CASC19-280ENST00000642102 1351 ntBASIC3.92□□□□□ -1.78
CTHRC1Q96CG8 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
CTHRC1Q96CG8 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.92□□□□□ -1.78
CTHRC1Q96CG8 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.92□□□□□ -1.78
CTHRC1Q96CG8 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CTHRC1Q96CG8 AC244517.1-201ENST00000606030 2086 ntBASIC3.92□□□□□ -1.78
CTHRC1Q96CG8 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CTHRC1Q96CG8 RNU6-1249P-201ENST00000363237 111 ntBASIC3.92□□□□□ -1.78
CTHRC1Q96CG8 RNU5E-8P-201ENST00000363502 116 ntBASIC3.92□□□□□ -1.78
CTHRC1Q96CG8 Y_RNA.303-201ENST00000364998 94 ntBASIC3.92□□□□□ -1.78
CTHRC1Q96CG8 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.92□□□□□ -1.78
CTHRC1Q96CG8 RNU6-754P-201ENST00000391166 107 ntBASIC3.92□□□□□ -1.78
CTHRC1Q96CG8 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CTHRC1Q96CG8 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CTHRC1Q96CG8 RPL23AP26-201ENST00000412728 464 ntBASIC3.92□□□□□ -1.78
CTHRC1Q96CG8 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.92□□□□□ -1.78
CTHRC1Q96CG8 AL137014.1-201ENST00000420490 1226 ntBASIC3.92□□□□□ -1.78
CTHRC1Q96CG8 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.92□□□□□ -1.78
CTHRC1Q96CG8 EIF4EP1-201ENST00000422311 642 ntBASIC3.92□□□□□ -1.78
CTHRC1Q96CG8 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.92□□□□□ -1.78
CTHRC1Q96CG8 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.92□□□□□ -1.78
CTHRC1Q96CG8 RPL23AP30-201ENST00000432419 501 ntBASIC3.92□□□□□ -1.78
CTHRC1Q96CG8 RPL23AP89-201ENST00000439324 255 ntBASIC3.92□□□□□ -1.78
CTHRC1Q96CG8 CALM1P1-201ENST00000442082 433 ntBASIC3.92□□□□□ -1.78
CTHRC1Q96CG8 MTND5P20-201ENST00000448677 143 ntBASIC3.92□□□□□ -1.78
CTHRC1Q96CG8 AC010655.1-201ENST00000449336 292 ntBASIC3.92□□□□□ -1.78
CTHRC1Q96CG8 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.92□□□□□ -1.78
CTHRC1Q96CG8 RAD23BP3-201ENST00000454157 1152 ntBASIC3.92□□□□□ -1.78
CTHRC1Q96CG8 snoU13.3-201ENST00000459441 104 ntBASIC3.92□□□□□ -1.78
CTHRC1Q96CG8 AC010469.1-201ENST00000463864 576 ntBASIC3.92□□□□□ -1.78
CTHRC1Q96CG8 AC083798.1-201ENST00000472671 131 ntBASIC3.92□□□□□ -1.78
CTHRC1Q96CG8 RPS29P19-201ENST00000479709 171 ntBASIC3.92□□□□□ -1.78
CTHRC1Q96CG8 AC069439.1-201ENST00000494739 167 ntBASIC3.92□□□□□ -1.78
CTHRC1Q96CG8 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CTHRC1Q96CG8 AC114797.1-201ENST00000514003 728 ntBASIC3.92□□□□□ -1.78
CTHRC1Q96CG8 RNU6-1220P-201ENST00000517126 108 ntBASIC3.92□□□□□ -1.78
CTHRC1Q96CG8 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.92□□□□□ -1.78
CTHRC1Q96CG8 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.92□□□□□ -1.78
CTHRC1Q96CG8 AC128657.1-201ENST00000549459 145 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms