Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 SSXP9-201ENST00000417503 292 ntBASIC2.68□□□□□ -1.98
VPS8Q8N3P4 AC108667.1-201ENST00000428618 249 ntBASIC2.68□□□□□ -1.98
VPS8Q8N3P4 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.68□□□□□ -1.98
VPS8Q8N3P4 RPL21P104-201ENST00000464143 478 ntBASIC2.68□□□□□ -1.98
VPS8Q8N3P4 RN7SKP82-201ENST00000516786 223 ntBASIC2.68□□□□□ -1.98
VPS8Q8N3P4 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.68□□□□□ -1.98
VPS8Q8N3P4 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.68□□□□□ -1.98
VPS8Q8N3P4 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.68□□□□□ -1.98
VPS8Q8N3P4 MIR3690-201ENST00000580266 75 ntBASIC2.68□□□□□ -1.98
VPS8Q8N3P4 AC124283.4-201ENST00000581815 456 ntBASIC2.68□□□□□ -1.98
VPS8Q8N3P4 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.68□□□□□ -1.98
VPS8Q8N3P4 GMCL1P2-201ENST00000605230 823 ntBASIC2.68□□□□□ -1.98
VPS8Q8N3P4 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
VPS8Q8N3P4 AP002907.1-201ENST00000606361 1430 ntBASIC2.67□□□□□ -1.98
VPS8Q8N3P4 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.67□□□□□ -1.98
VPS8Q8N3P4 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.67□□□□□ -1.98
VPS8Q8N3P4 CUL4AP1-201ENST00000514750 1863 ntBASIC2.67□□□□□ -1.98
VPS8Q8N3P4 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
VPS8Q8N3P4 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.67□□□□□ -1.98
VPS8Q8N3P4 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.67□□□□□ -1.98
VPS8Q8N3P4 HMGB1P45-201ENST00000435986 653 ntBASIC2.67□□□□□ -1.98
VPS8Q8N3P4 USP9YP10-201ENST00000454868 628 ntBASIC2.67□□□□□ -1.98
VPS8Q8N3P4 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC2.67□□□□□ -1.98
VPS8Q8N3P4 SNORD59.2-201ENST00000516873 68 ntBASIC2.67□□□□□ -1.98
VPS8Q8N3P4 RNU6-711P-201ENST00000517255 106 ntBASIC2.67□□□□□ -1.98
VPS8Q8N3P4 AC025755.1-201ENST00000521306 278 ntBASIC2.67□□□□□ -1.98
VPS8Q8N3P4 SETP2-201ENST00000553886 926 ntBASIC2.67□□□□□ -1.98
VPS8Q8N3P4 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.67□□□□□ -1.98
VPS8Q8N3P4 AC091057.2-201ENST00000602594 792 ntBASIC2.67□□□□□ -1.98
VPS8Q8N3P4 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
VPS8Q8N3P4 SNHG22-203ENST00000617833 660 ntBASIC2.67□□□□□ -1.98
VPS8Q8N3P4 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.66□□□□□ -1.98
VPS8Q8N3P4 AP005901.5-201ENST00000545779 1796 ntBASIC2.66□□□□□ -1.98
VPS8Q8N3P4 SNORA51.2-201ENST00000364595 132 ntBASIC2.66□□□□□ -1.98
VPS8Q8N3P4 AC073264.1-201ENST00000411508 416 ntBASIC2.66□□□□□ -1.98
VPS8Q8N3P4 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.66□□□□□ -1.98
VPS8Q8N3P4 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.66□□□□□ -1.98
VPS8Q8N3P4 AL592045.1-201ENST00000429867 352 ntBASIC2.66□□□□□ -1.98
VPS8Q8N3P4 MTCYBP45-201ENST00000435243 565 ntBASIC2.66□□□□□ -1.98
VPS8Q8N3P4 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC2.66□□□□□ -1.98
VPS8Q8N3P4 HMGB1P18-201ENST00000438801 619 ntBASIC2.66□□□□□ -1.98
VPS8Q8N3P4 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.66□□□□□ -1.98
VPS8Q8N3P4 HNRNPDLP3-201ENST00000456745 380 ntBASIC2.66□□□□□ -1.98
VPS8Q8N3P4 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2.66□□□□□ -1.98
VPS8Q8N3P4 PTP4A1P6-201ENST00000531034 478 ntBASIC2.66□□□□□ -1.98
VPS8Q8N3P4 GNAI2P1-201ENST00000541815 315 ntBASIC2.66□□□□□ -1.98
VPS8Q8N3P4 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
VPS8Q8N3P4 MIR4448-201ENST00000584360 86 ntBASIC2.66□□□□□ -1.98
VPS8Q8N3P4 AC024560.3-201ENST00000608482 349 ntBASIC2.66□□□□□ -1.98
VPS8Q8N3P4 AL136520.1-201ENST00000600311 1322 ntBASIC2.65□□□□□ -1.98
VPS8Q8N3P4 AC093084.1-201ENST00000424233 687 ntBASIC2.65□□□□□ -1.99
VPS8Q8N3P4 OR7L1P-201ENST00000456181 380 ntBASIC2.65□□□□□ -1.99
VPS8Q8N3P4 NCOR1P1-202ENST00000486162 291 ntBASIC2.65□□□□□ -1.99
VPS8Q8N3P4 AC005912.1-201ENST00000495392 255 ntBASIC2.65□□□□□ -1.99
VPS8Q8N3P4 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC2.65□□□□□ -1.99
VPS8Q8N3P4 HMGB1P47-201ENST00000511281 589 ntBASIC2.65□□□□□ -1.99
VPS8Q8N3P4 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC2.65□□□□□ -1.99
VPS8Q8N3P4 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC2.65□□□□□ -1.99
VPS8Q8N3P4 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
VPS8Q8N3P4 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.64□□□□□ -1.99
VPS8Q8N3P4 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
VPS8Q8N3P4 RNA5SP27-201ENST00000363839 119 ntBASIC2.64□□□□□ -1.99
VPS8Q8N3P4 RNU6-457P-201ENST00000363999 107 ntBASIC2.64□□□□□ -1.99
VPS8Q8N3P4 AL121972.1-201ENST00000402023 252 ntBASIC2.64□□□□□ -1.99
VPS8Q8N3P4 LUZP4P1-201ENST00000415420 344 ntBASIC2.64□□□□□ -1.99
VPS8Q8N3P4 RN7SKP210-201ENST00000459176 261 ntBASIC2.64□□□□□ -1.99
VPS8Q8N3P4 AC104472.2-201ENST00000469035 601 ntBASIC2.64□□□□□ -1.99
VPS8Q8N3P4 AIG1P1-201ENST00000503376 148 ntBASIC2.64□□□□□ -1.99
VPS8Q8N3P4 SCARNA17.1-201ENST00000516211 143 ntBASIC2.64□□□□□ -1.99
VPS8Q8N3P4 SCARNA17.2-201ENST00000516334 143 ntBASIC2.64□□□□□ -1.99
VPS8Q8N3P4 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.64□□□□□ -1.99
VPS8Q8N3P4 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC2.64□□□□□ -1.99
VPS8Q8N3P4 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC2.64□□□□□ -1.99
VPS8Q8N3P4 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.64□□□□□ -1.99
VPS8Q8N3P4 AC044913.1-201ENST00000557200 430 ntBASIC2.64□□□□□ -1.99
VPS8Q8N3P4 AP001004.1-201ENST00000582468 324 ntBASIC2.64□□□□□ -1.99
VPS8Q8N3P4 SCARNA17.4-201ENST00000614296 143 ntBASIC2.64□□□□□ -1.99
VPS8Q8N3P4 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
VPS8Q8N3P4 RNU6-356P-201ENST00000384140 107 ntBASIC2.63□□□□□ -1.99
VPS8Q8N3P4 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.63□□□□□ -1.99
VPS8Q8N3P4 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.63□□□□□ -1.99
VPS8Q8N3P4 RPS26P30-201ENST00000443431 335 ntBASIC2.63□□□□□ -1.99
VPS8Q8N3P4 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC2.63□□□□□ -1.99
VPS8Q8N3P4 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.63□□□□□ -1.99
VPS8Q8N3P4 SNORA25.15-201ENST00000516487 89 ntBASIC2.63□□□□□ -1.99
VPS8Q8N3P4 TRAV11-201ENST00000539512 339 ntBASIC2.63□□□□□ -1.99
VPS8Q8N3P4 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
VPS8Q8N3P4 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.63□□□□□ -1.99
VPS8Q8N3P4 MIR4498-201ENST00000577599 66 ntBASIC2.63□□□□□ -1.99
VPS8Q8N3P4 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
VPS8Q8N3P4 MIR3618-201ENST00000580330 88 ntBASIC2.63□□□□□ -1.99
VPS8Q8N3P4 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.63□□□□□ -1.99
VPS8Q8N3P4 HPVC1-201ENST00000629899 1198 ntBASIC2.63□□□□□ -1.99
VPS8Q8N3P4 AL359715.4-201ENST00000606629 1436 ntBASIC2.63□□□□□ -1.99
VPS8Q8N3P4 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.62□□□□□ -1.99
VPS8Q8N3P4 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
VPS8Q8N3P4 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.62□□□□□ -1.99
VPS8Q8N3P4 AC098592.2-201ENST00000413158 265 ntBASIC2.62□□□□□ -1.99
VPS8Q8N3P4 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.62□□□□□ -1.99
VPS8Q8N3P4 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms