Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 MTND4LP5-201ENST00000605152 292 ntBASIC5.5□□□□□ -1.53
DEPDC4Q8N2C3 RPSAP75-201ENST00000605848 301 ntBASIC5.5□□□□□ -1.53
DEPDC4Q8N2C3 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC5.5□□□□□ -1.53
DEPDC4Q8N2C3 TEX41-280ENST00000629185 591 ntTSL 5 BASIC5.5□□□□□ -1.53
DEPDC4Q8N2C3 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
DEPDC4Q8N2C3 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
DEPDC4Q8N2C3 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.5□□□□□ -1.53
DEPDC4Q8N2C3 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.5□□□□□ -1.53
DEPDC4Q8N2C3 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
DEPDC4Q8N2C3 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
DEPDC4Q8N2C3 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
DEPDC4Q8N2C3 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
DEPDC4Q8N2C3 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
DEPDC4Q8N2C3 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
DEPDC4Q8N2C3 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
DEPDC4Q8N2C3 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
DEPDC4Q8N2C3 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
DEPDC4Q8N2C3 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
DEPDC4Q8N2C3 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
DEPDC4Q8N2C3 RNU5A-1-201ENST00000362698 116 ntBASIC5.49□□□□□ -1.53
DEPDC4Q8N2C3 RNU4-50P-201ENST00000364361 141 ntBASIC5.49□□□□□ -1.53
DEPDC4Q8N2C3 RNA5SP198-201ENST00000410376 127 ntBASIC5.49□□□□□ -1.53
DEPDC4Q8N2C3 ARL5AP4-201ENST00000430731 512 ntBASIC5.49□□□□□ -1.53
DEPDC4Q8N2C3 KNOP1P3-201ENST00000446933 426 ntBASIC5.49□□□□□ -1.53
DEPDC4Q8N2C3 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC5.49□□□□□ -1.53
DEPDC4Q8N2C3 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.49□□□□□ -1.53
DEPDC4Q8N2C3 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.49□□□□□ -1.53
DEPDC4Q8N2C3 FRG2FP-204ENST00000453982 852 ntBASIC5.49□□□□□ -1.53
DEPDC4Q8N2C3 SNORD127-201ENST00000458892 86 ntBASIC5.49□□□□□ -1.53
DEPDC4Q8N2C3 RPL12P30-201ENST00000488389 499 ntBASIC5.49□□□□□ -1.53
DEPDC4Q8N2C3 RPS17P5-201ENST00000498293 408 ntBASIC5.49□□□□□ -1.53
DEPDC4Q8N2C3 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.49□□□□□ -1.53
DEPDC4Q8N2C3 RNU1-86P-201ENST00000516108 154 ntBASIC5.49□□□□□ -1.53
DEPDC4Q8N2C3 Y_RNA.687-201ENST00000516558 91 ntBASIC5.49□□□□□ -1.53
DEPDC4Q8N2C3 RNU1-107P-201ENST00000516617 154 ntBASIC5.49□□□□□ -1.53
DEPDC4Q8N2C3 Y_RNA.710-201ENST00000516975 110 ntBASIC5.49□□□□□ -1.53
DEPDC4Q8N2C3 AC021006.3-201ENST00000530771 192 ntBASIC5.49□□□□□ -1.53
DEPDC4Q8N2C3 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC5.49□□□□□ -1.53
DEPDC4Q8N2C3 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.49□□□□□ -1.53
DEPDC4Q8N2C3 TRAV37-201ENST00000553906 342 ntBASIC5.49□□□□□ -1.53
DEPDC4Q8N2C3 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC5.49□□□□□ -1.53
DEPDC4Q8N2C3 MIR4458-201ENST00000578872 75 ntBASIC5.49□□□□□ -1.53
DEPDC4Q8N2C3 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.49□□□□□ -1.53
DEPDC4Q8N2C3 AC119403.2-201ENST00000590960 598 ntBASIC5.49□□□□□ -1.53
DEPDC4Q8N2C3 AL109918.3-201ENST00000603072 338 ntBASIC5.49□□□□□ -1.53
DEPDC4Q8N2C3 AL121917.1-203ENST00000605534 577 ntBASIC5.49□□□□□ -1.53
DEPDC4Q8N2C3 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.49□□□□□ -1.53
DEPDC4Q8N2C3 AC006023.2-201ENST00000609916 167 ntBASIC5.49□□□□□ -1.53
DEPDC4Q8N2C3 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.49□□□□□ -1.53
DEPDC4Q8N2C3 AC141273.2-201ENST00000618989 130 ntBASIC5.49□□□□□ -1.53
DEPDC4Q8N2C3 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
DEPDC4Q8N2C3 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
DEPDC4Q8N2C3 AC100778.3-201ENST00000580060 1750 ntBASIC5.49□□□□□ -1.53
DEPDC4Q8N2C3 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.49□□□□□ -1.53
DEPDC4Q8N2C3 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
DEPDC4Q8N2C3 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
DEPDC4Q8N2C3 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.49□□□□□ -1.53
DEPDC4Q8N2C3 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.48□□□□□ -1.53
DEPDC4Q8N2C3 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
DEPDC4Q8N2C3 AL049555.1-201ENST00000562834 1933 ntBASIC5.48□□□□□ -1.53
DEPDC4Q8N2C3 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC5.48□□□□□ -1.53
DEPDC4Q8N2C3 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
DEPDC4Q8N2C3 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.48□□□□□ -1.53
DEPDC4Q8N2C3 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
DEPDC4Q8N2C3 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
DEPDC4Q8N2C3 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
DEPDC4Q8N2C3 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
DEPDC4Q8N2C3 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
DEPDC4Q8N2C3 Y_RNA.33-201ENST00000362591 102 ntBASIC5.48□□□□□ -1.53
DEPDC4Q8N2C3 RNA5SP375-201ENST00000362975 119 ntBASIC5.48□□□□□ -1.53
DEPDC4Q8N2C3 Y_RNA.214-201ENST00000364201 112 ntBASIC5.48□□□□□ -1.53
DEPDC4Q8N2C3 U8.8-201ENST00000365399 135 ntBASIC5.48□□□□□ -1.53
DEPDC4Q8N2C3 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
DEPDC4Q8N2C3 GCNT1P4-201ENST00000404096 329 ntBASIC5.48□□□□□ -1.53
DEPDC4Q8N2C3 RNU2-64P-201ENST00000411315 191 ntBASIC5.48□□□□□ -1.53
DEPDC4Q8N2C3 MTCO3P19-201ENST00000415864 321 ntBASIC5.48□□□□□ -1.53
DEPDC4Q8N2C3 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.48□□□□□ -1.53
DEPDC4Q8N2C3 CRIP1P1-201ENST00000427567 185 ntBASIC5.48□□□□□ -1.53
DEPDC4Q8N2C3 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.48□□□□□ -1.53
DEPDC4Q8N2C3 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC5.48□□□□□ -1.53
DEPDC4Q8N2C3 RPS3AP12-201ENST00000443616 753 ntBASIC5.48□□□□□ -1.53
DEPDC4Q8N2C3 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.48□□□□□ -1.53
DEPDC4Q8N2C3 RN7SL197P-201ENST00000466981 299 ntBASIC5.48□□□□□ -1.53
DEPDC4Q8N2C3 RN7SL214P-201ENST00000487317 265 ntBASIC5.48□□□□□ -1.53
DEPDC4Q8N2C3 AC110792.1-201ENST00000491826 472 ntBASIC5.48□□□□□ -1.53
DEPDC4Q8N2C3 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.48□□□□□ -1.53
DEPDC4Q8N2C3 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.48□□□□□ -1.53
DEPDC4Q8N2C3 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC5.48□□□□□ -1.53
DEPDC4Q8N2C3 ZNF519P4-201ENST00000514008 125 ntBASIC5.48□□□□□ -1.53
DEPDC4Q8N2C3 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC5.48□□□□□ -1.53
DEPDC4Q8N2C3 SNORA25.11-201ENST00000515935 105 ntBASIC5.48□□□□□ -1.53
DEPDC4Q8N2C3 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC5.48□□□□□ -1.53
DEPDC4Q8N2C3 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.48□□□□□ -1.53
DEPDC4Q8N2C3 IGKV3D-34-201ENST00000522638 302 ntBASIC5.48□□□□□ -1.53
DEPDC4Q8N2C3 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC5.48□□□□□ -1.53
DEPDC4Q8N2C3 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC5.48□□□□□ -1.53
DEPDC4Q8N2C3 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
DEPDC4Q8N2C3 AC006600.1-201ENST00000572529 153 ntBASIC5.48□□□□□ -1.53
DEPDC4Q8N2C3 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC5.48□□□□□ -1.53
DEPDC4Q8N2C3 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms