Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC234771.5-201ENST00000600161 514 ntBASIC4.62□□□□□ -1.67
TRIM48Q8IWZ4 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC4.62□□□□□ -1.67
TRIM48Q8IWZ4 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.62□□□□□ -1.67
TRIM48Q8IWZ4 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
TRIM48Q8IWZ4 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.62□□□□□ -1.67
TRIM48Q8IWZ4 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
TRIM48Q8IWZ4 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
TRIM48Q8IWZ4 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.62□□□□□ -1.67
TRIM48Q8IWZ4 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
TRIM48Q8IWZ4 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TRIM48Q8IWZ4 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM48Q8IWZ4 IQCB2P-201ENST00000401788 1633 ntBASIC4.61□□□□□ -1.67
TRIM48Q8IWZ4 SALL4P2-201ENST00000423288 2910 ntBASIC4.61□□□□□ -1.67
TRIM48Q8IWZ4 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM48Q8IWZ4 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.61□□□□□ -1.67
TRIM48Q8IWZ4 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.61□□□□□ -1.67
TRIM48Q8IWZ4 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
TRIM48Q8IWZ4 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM48Q8IWZ4 AL139276.1-201ENST00000311910 1001 ntBASIC4.61□□□□□ -1.67
TRIM48Q8IWZ4 AC079741.1-201ENST00000321498 212 ntBASIC4.61□□□□□ -1.67
TRIM48Q8IWZ4 Y_RNA.301-201ENST00000364990 103 ntBASIC4.61□□□□□ -1.67
TRIM48Q8IWZ4 RNU6-1304P-201ENST00000411374 106 ntBASIC4.61□□□□□ -1.67
TRIM48Q8IWZ4 AC092447.6-201ENST00000414578 210 ntBASIC4.61□□□□□ -1.67
TRIM48Q8IWZ4 OR6C66P-201ENST00000414917 930 ntBASIC4.61□□□□□ -1.67
TRIM48Q8IWZ4 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.61□□□□□ -1.67
TRIM48Q8IWZ4 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.61□□□□□ -1.67
TRIM48Q8IWZ4 KCTD9P3-201ENST00000434597 1169 ntBASIC4.61□□□□□ -1.67
TRIM48Q8IWZ4 ARL2BPP10-201ENST00000446487 531 ntBASIC4.61□□□□□ -1.67
TRIM48Q8IWZ4 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.61□□□□□ -1.67
TRIM48Q8IWZ4 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.61□□□□□ -1.67
TRIM48Q8IWZ4 EIF4A1P11-201ENST00000451239 222 ntBASIC4.61□□□□□ -1.67
TRIM48Q8IWZ4 AC079168.2-201ENST00000453977 416 ntBASIC4.61□□□□□ -1.67
TRIM48Q8IWZ4 SNRPFP3-201ENST00000457792 225 ntBASIC4.61□□□□□ -1.67
TRIM48Q8IWZ4 ST13P14-201ENST00000474095 734 ntBASIC4.61□□□□□ -1.67
TRIM48Q8IWZ4 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.61□□□□□ -1.67
TRIM48Q8IWZ4 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.61□□□□□ -1.67
TRIM48Q8IWZ4 AC091885.1-201ENST00000506658 268 ntBASIC4.61□□□□□ -1.67
TRIM48Q8IWZ4 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.61□□□□□ -1.67
TRIM48Q8IWZ4 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.61□□□□□ -1.67
TRIM48Q8IWZ4 RN7SKP46-201ENST00000515942 234 ntBASIC4.61□□□□□ -1.67
TRIM48Q8IWZ4 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC4.61□□□□□ -1.67
TRIM48Q8IWZ4 DEFB108D-201ENST00000527787 222 ntBASIC4.61□□□□□ -1.67
TRIM48Q8IWZ4 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.61□□□□□ -1.67
TRIM48Q8IWZ4 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.61□□□□□ -1.67
TRIM48Q8IWZ4 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.61□□□□□ -1.67
TRIM48Q8IWZ4 AC024619.4-201ENST00000580924 316 ntBASIC4.61□□□□□ -1.67
TRIM48Q8IWZ4 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.61□□□□□ -1.67
TRIM48Q8IWZ4 POLR3GP2-201ENST00000588366 668 ntBASIC4.61□□□□□ -1.67
TRIM48Q8IWZ4 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.61□□□□□ -1.67
TRIM48Q8IWZ4 LLPHP1-201ENST00000603571 367 ntBASIC4.61□□□□□ -1.67
TRIM48Q8IWZ4 AC092807.2-201ENST00000609367 243 ntBASIC4.61□□□□□ -1.67
TRIM48Q8IWZ4 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.61□□□□□ -1.67
TRIM48Q8IWZ4 uc_338.34-201ENST00000617467 174 ntBASIC4.61□□□□□ -1.67
TRIM48Q8IWZ4 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.61□□□□□ -1.67
TRIM48Q8IWZ4 AC090971.5-201ENST00000621102 293 ntBASIC4.61□□□□□ -1.67
TRIM48Q8IWZ4 AC025034.2-201ENST00000623264 286 ntBASIC4.61□□□□□ -1.67
TRIM48Q8IWZ4 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.61□□□□□ -1.67
TRIM48Q8IWZ4 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.61□□□□□ -1.67
TRIM48Q8IWZ4 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.61□□□□□ -1.67
TRIM48Q8IWZ4 SAGE4P-201ENST00000442271 3381 ntBASIC4.61□□□□□ -1.67
TRIM48Q8IWZ4 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
TRIM48Q8IWZ4 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM48Q8IWZ4 MTND4P27-201ENST00000450813 1354 ntBASIC4.61□□□□□ -1.67
TRIM48Q8IWZ4 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM48Q8IWZ4 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM48Q8IWZ4 PHKBP1-201ENST00000450951 1951 ntBASIC4.6□□□□□ -1.67
TRIM48Q8IWZ4 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.6□□□□□ -1.67
TRIM48Q8IWZ4 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM48Q8IWZ4 MIR369-201ENST00000362155 70 ntBASIC4.6□□□□□ -1.67
TRIM48Q8IWZ4 RNU6-1252P-201ENST00000363054 104 ntBASIC4.6□□□□□ -1.67
TRIM48Q8IWZ4 RNU6-263P-201ENST00000363811 107 ntBASIC4.6□□□□□ -1.67
TRIM48Q8IWZ4 Y_RNA.216-201ENST00000364205 93 ntBASIC4.6□□□□□ -1.67
TRIM48Q8IWZ4 SNORD115-7-201ENST00000365306 82 ntBASIC4.6□□□□□ -1.67
TRIM48Q8IWZ4 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
TRIM48Q8IWZ4 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM48Q8IWZ4 RNA5SP296-201ENST00000410523 111 ntBASIC4.6□□□□□ -1.67
TRIM48Q8IWZ4 RNU4-14P-201ENST00000410858 122 ntBASIC4.6□□□□□ -1.67
TRIM48Q8IWZ4 AC008065.1-201ENST00000428525 348 ntBASIC4.6□□□□□ -1.67
TRIM48Q8IWZ4 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.6□□□□□ -1.67
TRIM48Q8IWZ4 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.6□□□□□ -1.67
TRIM48Q8IWZ4 AL353597.2-202ENST00000434901 373 ntBASIC4.6□□□□□ -1.67
TRIM48Q8IWZ4 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.6□□□□□ -1.67
TRIM48Q8IWZ4 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.6□□□□□ -1.67
TRIM48Q8IWZ4 AC005094.1-201ENST00000440420 368 ntBASIC4.6□□□□□ -1.67
TRIM48Q8IWZ4 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.6□□□□□ -1.67
TRIM48Q8IWZ4 AC007967.1-201ENST00000455422 1159 ntBASIC4.6□□□□□ -1.67
TRIM48Q8IWZ4 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.6□□□□□ -1.67
TRIM48Q8IWZ4 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.6□□□□□ -1.67
TRIM48Q8IWZ4 CCDC34P1-201ENST00000507441 517 ntBASIC4.6□□□□□ -1.67
TRIM48Q8IWZ4 RNA5SP249-201ENST00000516127 99 ntBASIC4.6□□□□□ -1.67
TRIM48Q8IWZ4 RNU6-559P-201ENST00000516151 98 ntBASIC4.6□□□□□ -1.67
TRIM48Q8IWZ4 AP001804.3-201ENST00000525146 880 ntBASIC4.6□□□□□ -1.67
TRIM48Q8IWZ4 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.6□□□□□ -1.67
TRIM48Q8IWZ4 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.6□□□□□ -1.67
TRIM48Q8IWZ4 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.6□□□□□ -1.67
TRIM48Q8IWZ4 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.6□□□□□ -1.67
TRIM48Q8IWZ4 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.6□□□□□ -1.67
TRIM48Q8IWZ4 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC4.6□□□□□ -1.67
TRIM48Q8IWZ4 MIR3942-201ENST00000585264 109 ntBASIC4.6□□□□□ -1.67
TRIM48Q8IWZ4 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms