Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2□□□□□ -2.09
CCDC58Q4VC31 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2□□□□□ -2.09
CCDC58Q4VC31 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC1.99□□□□□ -2.09
CCDC58Q4VC31 SNORA48.3-201ENST00000391081 134 ntBASIC1.99□□□□□ -2.09
CCDC58Q4VC31 U3.29-201ENST00000391296 212 ntBASIC1.99□□□□□ -2.09
CCDC58Q4VC31 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.99□□□□□ -2.09
CCDC58Q4VC31 AC008280.1-201ENST00000418851 412 ntBASIC1.99□□□□□ -2.09
CCDC58Q4VC31 AL365496.1-201ENST00000426885 215 ntBASIC1.99□□□□□ -2.09
CCDC58Q4VC31 RPL7L1P10-201ENST00000427790 463 ntBASIC1.99□□□□□ -2.09
CCDC58Q4VC31 MTCO1P45-201ENST00000431457 267 ntBASIC1.99□□□□□ -2.09
CCDC58Q4VC31 ANKRD26P4-201ENST00000455755 950 ntBASIC1.99□□□□□ -2.09
CCDC58Q4VC31 RNF138P1-201ENST00000502765 546 ntBASIC1.99□□□□□ -2.09
CCDC58Q4VC31 COL6A4P2-205ENST00000509855 506 ntBASIC1.99□□□□□ -2.09
CCDC58Q4VC31 AC067904.2-201ENST00000517322 1283 ntBASIC1.99□□□□□ -2.09
CCDC58Q4VC31 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
CCDC58Q4VC31 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC1.99□□□□□ -2.09
CCDC58Q4VC31 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC1.99□□□□□ -2.09
CCDC58Q4VC31 MIR4504-201ENST00000577413 92 ntBASIC1.99□□□□□ -2.09
CCDC58Q4VC31 MIR3616-201ENST00000584070 92 ntBASIC1.99□□□□□ -2.09
CCDC58Q4VC31 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC1.99□□□□□ -2.09
CCDC58Q4VC31 AL451007.1-201ENST00000595491 289 ntBASIC1.99□□□□□ -2.09
CCDC58Q4VC31 AC007621.1-201ENST00000604544 437 ntBASIC1.99□□□□□ -2.09
CCDC58Q4VC31 OR2AS2P-201ENST00000606902 342 ntBASIC1.99□□□□□ -2.09
CCDC58Q4VC31 AP004247.3-201ENST00000608682 624 ntBASIC1.99□□□□□ -2.09
CCDC58Q4VC31 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.99□□□□□ -2.09
CCDC58Q4VC31 AC009831.4-201ENST00000620744 325 ntBASIC1.99□□□□□ -2.09
CCDC58Q4VC31 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC1.99□□□□□ -2.09
CCDC58Q4VC31 AL160394.1-201ENST00000624765 724 ntBASIC1.99□□□□□ -2.09
CCDC58Q4VC31 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
CCDC58Q4VC31 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
CCDC58Q4VC31 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.99□□□□□ -2.09
CCDC58Q4VC31 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CCDC58Q4VC31 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CCDC58Q4VC31 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC1.98□□□□□ -2.09
CCDC58Q4VC31 RNU4-31P-201ENST00000384211 141 ntBASIC1.98□□□□□ -2.09
CCDC58Q4VC31 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
CCDC58Q4VC31 RNA5SP171-201ENST00000391071 115 ntBASIC1.98□□□□□ -2.09
CCDC58Q4VC31 SNORA48.7-201ENST00000391302 135 ntBASIC1.98□□□□□ -2.09
CCDC58Q4VC31 CIR1P3-201ENST00000405137 479 ntBASIC1.98□□□□□ -2.09
CCDC58Q4VC31 RPL7P44-201ENST00000424827 742 ntBASIC1.98□□□□□ -2.09
CCDC58Q4VC31 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC1.98□□□□□ -2.09
CCDC58Q4VC31 SDCBPP1-201ENST00000440192 890 ntBASIC1.98□□□□□ -2.09
CCDC58Q4VC31 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.98□□□□□ -2.09
CCDC58Q4VC31 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CCDC58Q4VC31 RNA5SP233-201ENST00000459153 113 ntBASIC1.98□□□□□ -2.09
CCDC58Q4VC31 AC234781.5-201ENST00000508429 271 ntBASIC1.98□□□□□ -2.09
CCDC58Q4VC31 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC1.98□□□□□ -2.09
CCDC58Q4VC31 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.98□□□□□ -2.09
CCDC58Q4VC31 UBTFL10-201ENST00000528532 562 ntBASIC1.98□□□□□ -2.09
CCDC58Q4VC31 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC1.98□□□□□ -2.09
CCDC58Q4VC31 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC1.98□□□□□ -2.09
CCDC58Q4VC31 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.98□□□□□ -2.09
CCDC58Q4VC31 POLR2KP1-201ENST00000553226 168 ntBASIC1.98□□□□□ -2.09
CCDC58Q4VC31 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC1.98□□□□□ -2.09
CCDC58Q4VC31 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC1.98□□□□□ -2.09
CCDC58Q4VC31 AL049870.4-201ENST00000555741 486 ntBASIC1.98□□□□□ -2.09
CCDC58Q4VC31 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC1.98□□□□□ -2.09
CCDC58Q4VC31 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.98□□□□□ -2.09
CCDC58Q4VC31 VN1R90P-201ENST00000595717 726 ntBASIC1.98□□□□□ -2.09
CCDC58Q4VC31 VN1R92P-201ENST00000598511 928 ntBASIC1.98□□□□□ -2.09
CCDC58Q4VC31 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
CCDC58Q4VC31 AC091932.3-201ENST00000624223 323 ntBASIC1.98□□□□□ -2.09
CCDC58Q4VC31 AC093591.3-201ENST00000634516 308 ntBASIC1.98□□□□□ -2.09
CCDC58Q4VC31 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC1.97□□□□□ -2.09
CCDC58Q4VC31 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC1.97□□□□□ -2.09
CCDC58Q4VC31 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.97□□□□□ -2.09
CCDC58Q4VC31 RNU6-198P-201ENST00000384258 104 ntBASIC1.97□□□□□ -2.09
CCDC58Q4VC31 RNU6-339P-201ENST00000384310 107 ntBASIC1.97□□□□□ -2.09
CCDC58Q4VC31 MIR196B-201ENST00000384852 84 ntBASIC1.97□□□□□ -2.09
CCDC58Q4VC31 U3.20-201ENST00000390909 217 ntBASIC1.97□□□□□ -2.09
CCDC58Q4VC31 RNU6-920P-201ENST00000410926 92 ntBASIC1.97□□□□□ -2.09
CCDC58Q4VC31 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC1.97□□□□□ -2.09
CCDC58Q4VC31 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.97□□□□□ -2.09
CCDC58Q4VC31 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC1.97□□□□□ -2.09
CCDC58Q4VC31 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.97□□□□□ -2.09
CCDC58Q4VC31 AL160175.1-201ENST00000428124 247 ntBASIC1.97□□□□□ -2.09
CCDC58Q4VC31 AC079780.1-201ENST00000428259 207 ntBASIC1.97□□□□□ -2.09
CCDC58Q4VC31 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CCDC58Q4VC31 ARPC3P1-201ENST00000437218 533 ntBASIC1.97□□□□□ -2.09
CCDC58Q4VC31 AC018634.1-201ENST00000437554 401 ntBASIC1.97□□□□□ -2.09
CCDC58Q4VC31 SDR42E1P3-201ENST00000438345 502 ntBASIC1.97□□□□□ -2.09
CCDC58Q4VC31 OSTCP8-201ENST00000445117 448 ntBASIC1.97□□□□□ -2.09
CCDC58Q4VC31 AC004022.1-201ENST00000447766 1066 ntBASIC1.97□□□□□ -2.09
CCDC58Q4VC31 RPL23AP7-203ENST00000449021 469 ntBASIC1.97□□□□□ -2.09
CCDC58Q4VC31 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.97□□□□□ -2.09
CCDC58Q4VC31 TRGVB-201ENST00000453257 471 ntBASIC1.97□□□□□ -2.09
CCDC58Q4VC31 AC109486.1-201ENST00000486833 374 ntBASIC1.97□□□□□ -2.09
CCDC58Q4VC31 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.97□□□□□ -2.09
CCDC58Q4VC31 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC1.97□□□□□ -2.09
CCDC58Q4VC31 RN7SKP31-201ENST00000516354 278 ntBASIC1.97□□□□□ -2.09
CCDC58Q4VC31 RNU2-44P-201ENST00000516795 194 ntBASIC1.97□□□□□ -2.09
CCDC58Q4VC31 AC022634.1-201ENST00000520765 532 ntBASIC1.97□□□□□ -2.09
CCDC58Q4VC31 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC1.97□□□□□ -2.09
CCDC58Q4VC31 ATP5F1P5-201ENST00000526403 760 ntBASIC1.97□□□□□ -2.09
CCDC58Q4VC31 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.97□□□□□ -2.09
CCDC58Q4VC31 MIR1254-2-201ENST00000579553 63 ntBASIC1.97□□□□□ -2.09
CCDC58Q4VC31 AC012493.3-201ENST00000604494 112 ntBASIC1.97□□□□□ -2.09
CCDC58Q4VC31 AP005137.2-201ENST00000609238 400 ntBASIC1.97□□□□□ -2.09
CCDC58Q4VC31 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC1.97□□□□□ -2.09
CCDC58Q4VC31 MFSD8-245ENST00000641743 948 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms