Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 RNA5SP339-201ENST00000390987 122 ntBASIC5.13□□□□□ -1.59
PCDH1Q08174 RNU6-1109P-201ENST00000391187 107 ntBASIC5.13□□□□□ -1.59
PCDH1Q08174 CYB5AP4-201ENST00000396692 399 ntBASIC5.13□□□□□ -1.59
PCDH1Q08174 AC013442.1-201ENST00000397347 228 ntBASIC5.13□□□□□ -1.59
PCDH1Q08174 AL133388.1-201ENST00000404509 287 ntBASIC5.13□□□□□ -1.59
PCDH1Q08174 RPS4XP7-201ENST00000406274 780 ntBASIC5.13□□□□□ -1.59
PCDH1Q08174 RNU6-101P-201ENST00000410323 104 ntBASIC5.13□□□□□ -1.59
PCDH1Q08174 RNU6-293P-201ENST00000411259 106 ntBASIC5.13□□□□□ -1.59
PCDH1Q08174 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.13□□□□□ -1.59
PCDH1Q08174 AC008065.1-201ENST00000428525 348 ntBASIC5.13□□□□□ -1.59
PCDH1Q08174 CYCSP34-201ENST00000458172 304 ntBASIC5.13□□□□□ -1.59
PCDH1Q08174 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC5.13□□□□□ -1.59
PCDH1Q08174 RN7SL51P-201ENST00000468230 285 ntBASIC5.13□□□□□ -1.59
PCDH1Q08174 AC100832.1-201ENST00000471945 383 ntBASIC5.13□□□□□ -1.59
PCDH1Q08174 RPL21P103-201ENST00000479921 488 ntBASIC5.13□□□□□ -1.59
PCDH1Q08174 VN1R105P-201ENST00000486595 910 ntBASIC5.13□□□□□ -1.59
PCDH1Q08174 HIGD1AP14-201ENST00000507617 282 ntBASIC5.13□□□□□ -1.59
PCDH1Q08174 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.13□□□□□ -1.59
PCDH1Q08174 HIGD1AP3-201ENST00000515857 278 ntBASIC5.13□□□□□ -1.59
PCDH1Q08174 RNU6-475P-201ENST00000516073 104 ntBASIC5.13□□□□□ -1.59
PCDH1Q08174 RNU6-390P-201ENST00000516259 103 ntBASIC5.13□□□□□ -1.59
PCDH1Q08174 AP006587.4-201ENST00000526053 529 ntBASIC5.13□□□□□ -1.59
PCDH1Q08174 AC090022.1-201ENST00000546569 311 ntBASIC5.13□□□□□ -1.59
PCDH1Q08174 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC5.13□□□□□ -1.59
PCDH1Q08174 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.13□□□□□ -1.59
PCDH1Q08174 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PCDH1Q08174 MIR8080-201ENST00000622224 89 ntBASIC5.13□□□□□ -1.59
PCDH1Q08174 AC067931.1-201ENST00000624190 671 ntBASIC5.13□□□□□ -1.59
PCDH1Q08174 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.13□□□□□ -1.59
PCDH1Q08174 AL596275.2-204ENST00000641628 552 ntBASIC5.13□□□□□ -1.59
PCDH1Q08174 AL596275.2-206ENST00000641957 626 ntBASIC5.13□□□□□ -1.59
PCDH1Q08174 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
PCDH1Q08174 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.13□□□□□ -1.59
PCDH1Q08174 AC023421.1-201ENST00000590535 1785 ntBASIC5.13□□□□□ -1.59
PCDH1Q08174 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PCDH1Q08174 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PCDH1Q08174 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PCDH1Q08174 BTBD10P1-201ENST00000549824 1352 ntBASIC5.13□□□□□ -1.59
PCDH1Q08174 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PCDH1Q08174 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PCDH1Q08174 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.13□□□□□ -1.59
PCDH1Q08174 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.13□□□□□ -1.59
PCDH1Q08174 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.13□□□□□ -1.59
PCDH1Q08174 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PCDH1Q08174 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.13□□□□□ -1.59
PCDH1Q08174 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PCDH1Q08174 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
PCDH1Q08174 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PCDH1Q08174 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PCDH1Q08174 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PCDH1Q08174 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
PCDH1Q08174 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
PCDH1Q08174 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PCDH1Q08174 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PCDH1Q08174 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.12□□□□□ -1.59
PCDH1Q08174 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PCDH1Q08174 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
PCDH1Q08174 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.12□□□□□ -1.59
PCDH1Q08174 RNU6-146P-201ENST00000384602 108 ntBASIC5.12□□□□□ -1.59
PCDH1Q08174 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
PCDH1Q08174 RN7SKP229-201ENST00000410465 302 ntBASIC5.12□□□□□ -1.59
PCDH1Q08174 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.12□□□□□ -1.59
PCDH1Q08174 AC099677.1-201ENST00000420575 175 ntBASIC5.12□□□□□ -1.59
PCDH1Q08174 AC243428.1-201ENST00000421099 264 ntBASIC5.12□□□□□ -1.59
PCDH1Q08174 EIF4EP1-201ENST00000422311 642 ntBASIC5.12□□□□□ -1.59
PCDH1Q08174 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC5.12□□□□□ -1.59
PCDH1Q08174 RPL23AP50-201ENST00000434149 455 ntBASIC5.12□□□□□ -1.59
PCDH1Q08174 NEFMP1-201ENST00000443423 1006 ntBASIC5.12□□□□□ -1.59
PCDH1Q08174 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC5.12□□□□□ -1.59
PCDH1Q08174 GEMIN8P3-201ENST00000445417 720 ntBASIC5.12□□□□□ -1.59
PCDH1Q08174 IGHV5-78-201ENST00000450948 295 ntBASIC5.12□□□□□ -1.59
PCDH1Q08174 AL583843.1-201ENST00000456070 346 ntBASIC5.12□□□□□ -1.59
PCDH1Q08174 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.12□□□□□ -1.59
PCDH1Q08174 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PCDH1Q08174 AC026979.1-201ENST00000492525 396 ntBASIC5.12□□□□□ -1.59
PCDH1Q08174 AC104564.1-201ENST00000493028 407 ntBASIC5.12□□□□□ -1.59
PCDH1Q08174 RN7SL447P-201ENST00000494711 245 ntBASIC5.12□□□□□ -1.59
PCDH1Q08174 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.12□□□□□ -1.59
PCDH1Q08174 AC104136.1-201ENST00000512969 394 ntBASIC5.12□□□□□ -1.59
PCDH1Q08174 AC006427.1-201ENST00000514359 712 ntBASIC5.12□□□□□ -1.59
PCDH1Q08174 RNU6-941P-201ENST00000516346 108 ntBASIC5.12□□□□□ -1.59
PCDH1Q08174 HMGB1P40-201ENST00000525121 540 ntBASIC5.12□□□□□ -1.59
PCDH1Q08174 AC126177.5-201ENST00000549599 178 ntBASIC5.12□□□□□ -1.59
PCDH1Q08174 AC025423.5-201ENST00000550230 219 ntBASIC5.12□□□□□ -1.59
PCDH1Q08174 AC007225.2-201ENST00000562529 256 ntBASIC5.12□□□□□ -1.59
PCDH1Q08174 MIR4716-201ENST00000579628 84 ntBASIC5.12□□□□□ -1.59
PCDH1Q08174 AC005899.2-201ENST00000584353 90 ntBASIC5.12□□□□□ -1.59
PCDH1Q08174 AC008814.1-201ENST00000603797 406 ntBASIC5.12□□□□□ -1.59
PCDH1Q08174 IGHV3-29-201ENST00000604817 344 ntBASIC5.12□□□□□ -1.59
PCDH1Q08174 U2.1-201ENST00000618978 145 ntBASIC5.12□□□□□ -1.59
PCDH1Q08174 AC243312.2-201ENST00000623340 601 ntBASIC5.12□□□□□ -1.59
PCDH1Q08174 AL049767.1-202ENST00000637826 242 ntBASIC5.12□□□□□ -1.59
PCDH1Q08174 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PCDH1Q08174 AC091812.1-201ENST00000432235 1948 ntBASIC5.12□□□□□ -1.59
PCDH1Q08174 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PCDH1Q08174 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PCDH1Q08174 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.12□□□□□ -1.59
PCDH1Q08174 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.12□□□□□ -1.59
PCDH1Q08174 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PCDH1Q08174 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms