Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.15□□□□□ -1.91
CDX1P47902 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.15□□□□□ -1.91
CDX1P47902 AP000254.1-201ENST00000609934 520 ntBASIC3.15□□□□□ -1.91
CDX1P47902 MIR8058-201ENST00000615737 89 ntBASIC3.15□□□□□ -1.91
CDX1P47902 AC002076.2-201ENST00000617362 122 ntBASIC3.15□□□□□ -1.91
CDX1P47902 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CDX1P47902 PLCE1P1-201ENST00000622094 305 ntBASIC3.15□□□□□ -1.91
CDX1P47902 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.15□□□□□ -1.91
CDX1P47902 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.15□□□□□ -1.91
CDX1P47902 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CDX1P47902 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
CDX1P47902 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CDX1P47902 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
CDX1P47902 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.15□□□□□ -1.91
CDX1P47902 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.14□□□□□ -1.91
CDX1P47902 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
CDX1P47902 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.14□□□□□ -1.91
CDX1P47902 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CDX1P47902 RNU6-223P-201ENST00000362830 107 ntBASIC3.14□□□□□ -1.91
CDX1P47902 RNU6-553P-201ENST00000364047 96 ntBASIC3.14□□□□□ -1.91
CDX1P47902 RN7SKP280-201ENST00000364196 304 ntBASIC3.14□□□□□ -1.91
CDX1P47902 SNORA23-201ENST00000365128 182 ntBASIC3.14□□□□□ -1.91
CDX1P47902 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
CDX1P47902 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CDX1P47902 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.14□□□□□ -1.91
CDX1P47902 VPS26BP1-201ENST00000417155 755 ntBASIC3.14□□□□□ -1.91
CDX1P47902 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.14□□□□□ -1.91
CDX1P47902 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.14□□□□□ -1.91
CDX1P47902 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CDX1P47902 AL691449.1-201ENST00000426570 421 ntBASIC3.14□□□□□ -1.91
CDX1P47902 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.14□□□□□ -1.91
CDX1P47902 AL358472.1-201ENST00000431295 329 ntBASIC3.14□□□□□ -1.91
CDX1P47902 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.14□□□□□ -1.91
CDX1P47902 SETP5-201ENST00000437270 562 ntBASIC3.14□□□□□ -1.91
CDX1P47902 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.14□□□□□ -1.91
CDX1P47902 RPS15AP36-201ENST00000492022 382 ntBASIC3.14□□□□□ -1.91
CDX1P47902 RPL7P24-201ENST00000493052 752 ntBASIC3.14□□□□□ -1.91
CDX1P47902 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.14□□□□□ -1.91
CDX1P47902 AC005178.1-201ENST00000508392 440 ntBASIC3.14□□□□□ -1.91
CDX1P47902 PCBP2P3-201ENST00000509726 843 ntBASIC3.14□□□□□ -1.91
CDX1P47902 FTH1P21-201ENST00000512179 511 ntBASIC3.14□□□□□ -1.91
CDX1P47902 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.14□□□□□ -1.91
CDX1P47902 MTND4LP18-201ENST00000526864 291 ntBASIC3.14□□□□□ -1.91
CDX1P47902 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.14□□□□□ -1.91
CDX1P47902 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.14□□□□□ -1.91
CDX1P47902 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.14□□□□□ -1.91
CDX1P47902 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.14□□□□□ -1.91
CDX1P47902 GTF2IP22-201ENST00000554443 182 ntBASIC3.14□□□□□ -1.91
CDX1P47902 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CDX1P47902 AC011260.1-201ENST00000578420 472 ntBASIC3.14□□□□□ -1.91
CDX1P47902 AL606490.9-201ENST00000603331 271 ntBASIC3.14□□□□□ -1.91
CDX1P47902 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.14□□□□□ -1.91
CDX1P47902 AC009570.1-201ENST00000609599 745 ntBASIC3.14□□□□□ -1.91
CDX1P47902 OR10AB1P-201ENST00000609613 938 ntBASIC3.14□□□□□ -1.91
CDX1P47902 AC093838.1-201ENST00000613014 469 ntBASIC3.14□□□□□ -1.91
CDX1P47902 XIST_intron.1-201ENST00000619444 68 ntBASIC3.14□□□□□ -1.91
CDX1P47902 OR8B1P-202ENST00000641132 1178 ntBASIC3.14□□□□□ -1.91
CDX1P47902 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CDX1P47902 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CDX1P47902 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.14□□□□□ -1.91
CDX1P47902 AC138915.3-201ENST00000562908 1389 ntBASIC3.13□□□□□ -1.91
CDX1P47902 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.13□□□□□ -1.91
CDX1P47902 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.13□□□□□ -1.91
CDX1P47902 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.13□□□□□ -1.91
CDX1P47902 RPL7P26-201ENST00000333817 754 ntBASIC3.13□□□□□ -1.91
CDX1P47902 Y_RNA.126-201ENST00000363382 111 ntBASIC3.13□□□□□ -1.91
CDX1P47902 SNORD35B-201ENST00000363660 87 ntBASIC3.13□□□□□ -1.91
CDX1P47902 MTCYBP36-201ENST00000404146 440 ntBASIC3.13□□□□□ -1.91
CDX1P47902 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.13□□□□□ -1.91
CDX1P47902 USP9YP26-201ENST00000421008 661 ntBASIC3.13□□□□□ -1.91
CDX1P47902 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.13□□□□□ -1.91
CDX1P47902 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.13□□□□□ -1.91
CDX1P47902 AL389915.1-201ENST00000422463 466 ntBASIC3.13□□□□□ -1.91
CDX1P47902 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.13□□□□□ -1.91
CDX1P47902 AL365184.2-201ENST00000431139 435 ntBASIC3.13□□□□□ -1.91
CDX1P47902 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.13□□□□□ -1.91
CDX1P47902 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.13□□□□□ -1.91
CDX1P47902 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.13□□□□□ -1.91
CDX1P47902 KCTD9P3-201ENST00000434597 1169 ntBASIC3.13□□□□□ -1.91
CDX1P47902 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.13□□□□□ -1.91
CDX1P47902 HMGN2P20-201ENST00000437531 273 ntBASIC3.13□□□□□ -1.91
CDX1P47902 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.13□□□□□ -1.91
CDX1P47902 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.13□□□□□ -1.91
CDX1P47902 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.13□□□□□ -1.91
CDX1P47902 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.13□□□□□ -1.91
CDX1P47902 AF131216.2-201ENST00000512316 564 ntBASIC3.13□□□□□ -1.91
CDX1P47902 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CDX1P47902 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.13□□□□□ -1.91
CDX1P47902 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.13□□□□□ -1.91
CDX1P47902 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.13□□□□□ -1.91
CDX1P47902 OR4H12P-201ENST00000556269 907 ntBASIC3.13□□□□□ -1.91
CDX1P47902 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.13□□□□□ -1.91
CDX1P47902 AC090888.1-201ENST00000561335 1141 ntBASIC3.13□□□□□ -1.91
CDX1P47902 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.13□□□□□ -1.91
CDX1P47902 RPL23AP84-201ENST00000571193 464 ntBASIC3.13□□□□□ -1.91
CDX1P47902 MIR4738-201ENST00000579134 87 ntBASIC3.13□□□□□ -1.91
CDX1P47902 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.13□□□□□ -1.91
CDX1P47902 AF038458.1-201ENST00000588406 262 ntBASIC3.13□□□□□ -1.91
CDX1P47902 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.13□□□□□ -1.91
CDX1P47902 AP000403.1-201ENST00000603349 851 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms