Protein–RNA interactions for Protein: P35908

KRT2, Keratin, type II cytoskeletal 2 epidermal, humanhuman

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT2P35908 TXNP1-201ENST00000441872 371 ntBASIC3.72□□□□□ -1.81
KRT2P35908 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.72□□□□□ -1.81
KRT2P35908 MTND2P4-201ENST00000445034 1004 ntBASIC3.72□□□□□ -1.81
KRT2P35908 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.72□□□□□ -1.81
KRT2P35908 HMGB3P8-201ENST00000449709 577 ntBASIC3.72□□□□□ -1.81
KRT2P35908 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.72□□□□□ -1.81
KRT2P35908 USP9YP34-201ENST00000453983 808 ntBASIC3.72□□□□□ -1.81
KRT2P35908 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.72□□□□□ -1.81
KRT2P35908 RN7SL442P-201ENST00000473804 320 ntBASIC3.72□□□□□ -1.81
KRT2P35908 AC017015.1-201ENST00000477387 286 ntBASIC3.72□□□□□ -1.81
KRT2P35908 HMGB1P28-201ENST00000507778 552 ntBASIC3.72□□□□□ -1.81
KRT2P35908 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.72□□□□□ -1.81
KRT2P35908 SCARNA20.6-201ENST00000517251 106 ntBASIC3.72□□□□□ -1.81
KRT2P35908 MRPS36P3-201ENST00000519284 130 ntBASIC3.72□□□□□ -1.81
KRT2P35908 AP001207.2-201ENST00000519490 539 ntBASIC3.72□□□□□ -1.81
KRT2P35908 AP001804.3-201ENST00000525146 880 ntBASIC3.72□□□□□ -1.81
KRT2P35908 HIGD1AP10-201ENST00000527837 282 ntBASIC3.72□□□□□ -1.81
KRT2P35908 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
KRT2P35908 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
KRT2P35908 AC018630.1-201ENST00000541376 925 ntBASIC3.72□□□□□ -1.81
KRT2P35908 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.72□□□□□ -1.81
KRT2P35908 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.72□□□□□ -1.81
KRT2P35908 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.72□□□□□ -1.81
KRT2P35908 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC3.72□□□□□ -1.81
KRT2P35908 ZNF415P1-201ENST00000582279 1166 ntBASIC3.72□□□□□ -1.81
KRT2P35908 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.72□□□□□ -1.81
KRT2P35908 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.72□□□□□ -1.81
KRT2P35908 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
KRT2P35908 AC012314.7-201ENST00000619693 93 ntBASIC3.72□□□□□ -1.81
KRT2P35908 AP003400.5-201ENST00000624827 617 ntBASIC3.72□□□□□ -1.81
KRT2P35908 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
KRT2P35908 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
KRT2P35908 AC138915.3-201ENST00000562908 1389 ntBASIC3.72□□□□□ -1.81
KRT2P35908 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
KRT2P35908 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
KRT2P35908 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
KRT2P35908 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.71□□□□□ -1.82
KRT2P35908 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
KRT2P35908 RPL7P26-201ENST00000333817 754 ntBASIC3.71□□□□□ -1.82
KRT2P35908 Y_RNA.201-201ENST00000364052 96 ntBASIC3.71□□□□□ -1.82
KRT2P35908 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
KRT2P35908 RNU6-413P-201ENST00000384115 107 ntBASIC3.71□□□□□ -1.82
KRT2P35908 MIR7-3-201ENST00000384898 110 ntBASIC3.71□□□□□ -1.82
KRT2P35908 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
KRT2P35908 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
KRT2P35908 BTF3L4P1-201ENST00000413813 468 ntBASIC3.71□□□□□ -1.82
KRT2P35908 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.71□□□□□ -1.82
KRT2P35908 TIMM9P2-201ENST00000419324 266 ntBASIC3.71□□□□□ -1.82
KRT2P35908 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.71□□□□□ -1.82
KRT2P35908 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.71□□□□□ -1.82
KRT2P35908 YME1L1P1-201ENST00000429435 297 ntBASIC3.71□□□□□ -1.82
KRT2P35908 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.71□□□□□ -1.82
KRT2P35908 SETP5-201ENST00000437270 562 ntBASIC3.71□□□□□ -1.82
KRT2P35908 AL121871.1-201ENST00000443413 436 ntBASIC3.71□□□□□ -1.82
KRT2P35908 BMI1P1-201ENST00000445879 941 ntBASIC3.71□□□□□ -1.82
KRT2P35908 AC005297.2-201ENST00000450430 606 ntBASIC3.71□□□□□ -1.82
KRT2P35908 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
KRT2P35908 RPL23AP44-201ENST00000482216 473 ntBASIC3.71□□□□□ -1.82
KRT2P35908 FAM172BP-201ENST00000487497 1089 ntBASIC3.71□□□□□ -1.82
KRT2P35908 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.71□□□□□ -1.82
KRT2P35908 AC023424.2-201ENST00000493479 777 ntBASIC3.71□□□□□ -1.82
KRT2P35908 WBP1LP4-201ENST00000505043 344 ntBASIC3.71□□□□□ -1.82
KRT2P35908 COX7A2P2-201ENST00000505291 250 ntBASIC3.71□□□□□ -1.82
KRT2P35908 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.71□□□□□ -1.82
KRT2P35908 RNU6-1095P-201ENST00000516148 108 ntBASIC3.71□□□□□ -1.82
KRT2P35908 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.71□□□□□ -1.82
KRT2P35908 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
KRT2P35908 OR10V3P-201ENST00000525712 725 ntBASIC3.71□□□□□ -1.82
KRT2P35908 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.71□□□□□ -1.82
KRT2P35908 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.71□□□□□ -1.82
KRT2P35908 AC090888.1-201ENST00000561335 1141 ntBASIC3.71□□□□□ -1.82
KRT2P35908 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.71□□□□□ -1.82
KRT2P35908 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.71□□□□□ -1.82
KRT2P35908 AC009094.1-201ENST00000564443 426 ntBASIC3.71□□□□□ -1.82
KRT2P35908 AC053481.3-201ENST00000577881 843 ntBASIC3.71□□□□□ -1.82
KRT2P35908 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.71□□□□□ -1.82
KRT2P35908 VN1R78P-201ENST00000597393 564 ntBASIC3.71□□□□□ -1.82
KRT2P35908 CKS1BP3-201ENST00000600888 237 ntBASIC3.71□□□□□ -1.82
KRT2P35908 AC107304.1-201ENST00000604229 296 ntBASIC3.71□□□□□ -1.82
KRT2P35908 AP002360.4-201ENST00000606980 481 ntBASIC3.71□□□□□ -1.82
KRT2P35908 AC106028.5-201ENST00000610332 395 ntBASIC3.71□□□□□ -1.82
KRT2P35908 AL355810.1-201ENST00000614629 552 ntBASIC3.71□□□□□ -1.82
KRT2P35908 MIR6075-201ENST00000620782 95 ntBASIC3.71□□□□□ -1.82
KRT2P35908 AC093648.1-201ENST00000623546 606 ntBASIC3.71□□□□□ -1.82
KRT2P35908 AC091903.1-201ENST00000624322 454 ntBASIC3.71□□□□□ -1.82
KRT2P35908 AL603839.4-201ENST00000624658 1005 ntBASIC3.71□□□□□ -1.82
KRT2P35908 AC090582.1-201ENST00000636321 199 ntBASIC3.71□□□□□ -1.82
KRT2P35908 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.71□□□□□ -1.82
KRT2P35908 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
KRT2P35908 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
KRT2P35908 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.71□□□□□ -1.82
KRT2P35908 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
KRT2P35908 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
KRT2P35908 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
KRT2P35908 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
KRT2P35908 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
KRT2P35908 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
KRT2P35908 SNORD116-9-201ENST00000384000 95 ntBASIC3.7□□□□□ -1.82
KRT2P35908 SNORD116-3-201ENST00000384287 95 ntBASIC3.7□□□□□ -1.82
KRT2P35908 SNORD116-7-201ENST00000384404 95 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms