Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 DHFRP6-201ENST00000401776 268 ntBASIC2.53□□□□□ -2
HLA-DPB1P04440 AL138885.1-201ENST00000405921 675 ntBASIC2.53□□□□□ -2
HLA-DPB1P04440 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.53□□□□□ -2
HLA-DPB1P04440 RNU2-47P-201ENST00000410649 186 ntBASIC2.53□□□□□ -2
HLA-DPB1P04440 AC099677.1-201ENST00000420575 175 ntBASIC2.53□□□□□ -2
HLA-DPB1P04440 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC2.53□□□□□ -2
HLA-DPB1P04440 DPPA2P1-201ENST00000428060 556 ntBASIC2.53□□□□□ -2
HLA-DPB1P04440 ZNF736P1Y-201ENST00000440402 1276 ntBASIC2.53□□□□□ -2
HLA-DPB1P04440 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.53□□□□□ -2
HLA-DPB1P04440 MTCO1P53-201ENST00000441633 699 ntBASIC2.53□□□□□ -2
HLA-DPB1P04440 RPL37P4-201ENST00000448908 268 ntBASIC2.53□□□□□ -2
HLA-DPB1P04440 Z82190.1-201ENST00000454534 490 ntBASIC2.53□□□□□ -2
HLA-DPB1P04440 AC026410.2-201ENST00000460281 156 ntBASIC2.53□□□□□ -2
HLA-DPB1P04440 RPL27AP5-201ENST00000469428 449 ntBASIC2.53□□□□□ -2
HLA-DPB1P04440 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.53□□□□□ -2
HLA-DPB1P04440 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.53□□□□□ -2
HLA-DPB1P04440 TMEM251P1-201ENST00000503717 318 ntBASIC2.53□□□□□ -2
HLA-DPB1P04440 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.53□□□□□ -2
HLA-DPB1P04440 KLHL2P1-201ENST00000508691 521 ntBASIC2.53□□□□□ -2
HLA-DPB1P04440 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.53□□□□□ -2
HLA-DPB1P04440 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.53□□□□□ -2
HLA-DPB1P04440 OR5AK1P-201ENST00000524837 922 ntBASIC2.53□□□□□ -2
HLA-DPB1P04440 AP002404.1-201ENST00000532005 451 ntBASIC2.53□□□□□ -2
HLA-DPB1P04440 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.53□□□□□ -2
HLA-DPB1P04440 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.53□□□□□ -2
HLA-DPB1P04440 AC004486.1-201ENST00000546846 233 ntBASIC2.53□□□□□ -2
HLA-DPB1P04440 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.53□□□□□ -2
HLA-DPB1P04440 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.53□□□□□ -2
HLA-DPB1P04440 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.53□□□□□ -2
HLA-DPB1P04440 TMF1P1-201ENST00000576058 373 ntBASIC2.53□□□□□ -2
HLA-DPB1P04440 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC2.53□□□□□ -2
HLA-DPB1P04440 AP001029.3-201ENST00000588063 596 ntBASIC2.53□□□□□ -2
HLA-DPB1P04440 BNIP3P22-201ENST00000593399 556 ntBASIC2.53□□□□□ -2
HLA-DPB1P04440 AC015871.2-201ENST00000603605 948 ntBASIC2.53□□□□□ -2
HLA-DPB1P04440 RPL23AP92-201ENST00000603609 255 ntBASIC2.53□□□□□ -2
HLA-DPB1P04440 AL035411.2-201ENST00000604022 421 ntBASIC2.53□□□□□ -2
HLA-DPB1P04440 PART1_2.1-201ENST00000612397 250 ntBASIC2.53□□□□□ -2
HLA-DPB1P04440 MIR1322-201ENST00000638013 71 ntBASIC2.53□□□□□ -2
HLA-DPB1P04440 FAM35CP-201ENST00000554755 2470 ntBASIC2.53□□□□□ -2
HLA-DPB1P04440 AC116096.1-201ENST00000566804 2314 ntBASIC2.53□□□□□ -2
HLA-DPB1P04440 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
HLA-DPB1P04440 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC2.53□□□□□ -2.01
HLA-DPB1P04440 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.52□□□□□ -2.01
HLA-DPB1P04440 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
HLA-DPB1P04440 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
HLA-DPB1P04440 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.52□□□□□ -2.01
HLA-DPB1P04440 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
HLA-DPB1P04440 MIR26A1-201ENST00000362205 77 ntBASIC2.52□□□□□ -2.01
HLA-DPB1P04440 SNORD116-12-201ENST00000384468 92 ntBASIC2.52□□□□□ -2.01
HLA-DPB1P04440 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
HLA-DPB1P04440 CYCSP45-201ENST00000402289 315 ntBASIC2.52□□□□□ -2.01
HLA-DPB1P04440 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.52□□□□□ -2.01
HLA-DPB1P04440 MRPS36P1-201ENST00000421291 307 ntBASIC2.52□□□□□ -2.01
HLA-DPB1P04440 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.52□□□□□ -2.01
HLA-DPB1P04440 RPL35AP12-201ENST00000425362 338 ntBASIC2.52□□□□□ -2.01
HLA-DPB1P04440 AC007742.1-201ENST00000425789 329 ntBASIC2.52□□□□□ -2.01
HLA-DPB1P04440 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.52□□□□□ -2.01
HLA-DPB1P04440 NANOGP2-201ENST00000435391 727 ntBASIC2.52□□□□□ -2.01
HLA-DPB1P04440 ELOCP26-201ENST00000436067 329 ntBASIC2.52□□□□□ -2.01
HLA-DPB1P04440 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC2.52□□□□□ -2.01
HLA-DPB1P04440 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.52□□□□□ -2.01
HLA-DPB1P04440 AC092427.1-201ENST00000439177 601 ntBASIC2.52□□□□□ -2.01
HLA-DPB1P04440 AL645638.1-201ENST00000440519 361 ntBASIC2.52□□□□□ -2.01
HLA-DPB1P04440 RPL23AP76-201ENST00000441860 458 ntBASIC2.52□□□□□ -2.01
HLA-DPB1P04440 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.52□□□□□ -2.01
HLA-DPB1P04440 MTCYBP11-201ENST00000447254 1109 ntBASIC2.52□□□□□ -2.01
HLA-DPB1P04440 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.52□□□□□ -2.01
HLA-DPB1P04440 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.52□□□□□ -2.01
HLA-DPB1P04440 AC108734.3-201ENST00000481241 1165 ntBASIC2.52□□□□□ -2.01
HLA-DPB1P04440 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.52□□□□□ -2.01
HLA-DPB1P04440 MTCYBP17-201ENST00000503579 789 ntBASIC2.52□□□□□ -2.01
HLA-DPB1P04440 CBX3P3-201ENST00000508108 532 ntBASIC2.52□□□□□ -2.01
HLA-DPB1P04440 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.52□□□□□ -2.01
HLA-DPB1P04440 HIGD1AP17-201ENST00000554576 276 ntBASIC2.52□□□□□ -2.01
HLA-DPB1P04440 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.52□□□□□ -2.01
HLA-DPB1P04440 FAM60BP-201ENST00000578364 658 ntBASIC2.52□□□□□ -2.01
HLA-DPB1P04440 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.52□□□□□ -2.01
HLA-DPB1P04440 BNIP3P27-201ENST00000599991 412 ntBASIC2.52□□□□□ -2.01
HLA-DPB1P04440 AL390838.2-201ENST00000602394 274 ntBASIC2.52□□□□□ -2.01
HLA-DPB1P04440 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
HLA-DPB1P04440 AL390240.1-201ENST00000612950 384 ntBASIC2.52□□□□□ -2.01
HLA-DPB1P04440 CR381653.2-201ENST00000624041 768 ntBASIC2.52□□□□□ -2.01
HLA-DPB1P04440 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
HLA-DPB1P04440 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.52□□□□□ -2.01
HLA-DPB1P04440 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
HLA-DPB1P04440 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.52□□□□□ -2.01
HLA-DPB1P04440 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
HLA-DPB1P04440 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC2.52□□□□□ -2.01
HLA-DPB1P04440 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
HLA-DPB1P04440 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.52□□□□□ -2.01
HLA-DPB1P04440 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
HLA-DPB1P04440 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
HLA-DPB1P04440 RNU6-1155P-201ENST00000363554 107 ntBASIC2.51□□□□□ -2.01
HLA-DPB1P04440 AL591034.1-201ENST00000407447 340 ntBASIC2.51□□□□□ -2.01
HLA-DPB1P04440 SNORA11.1-201ENST00000408133 129 ntBASIC2.51□□□□□ -2.01
HLA-DPB1P04440 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.51□□□□□ -2.01
HLA-DPB1P04440 SSXP9-201ENST00000417503 292 ntBASIC2.51□□□□□ -2.01
HLA-DPB1P04440 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC2.51□□□□□ -2.01
HLA-DPB1P04440 AL513175.2-201ENST00000422071 443 ntBASIC2.51□□□□□ -2.01
HLA-DPB1P04440 MTCO1P39-201ENST00000426148 480 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms