Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 AC138969.1-213ENST00000331436 462 ntBASIC5.73□□□□□ -1.49
GFRA3O60609 RNU4-17P-201ENST00000365598 141 ntBASIC5.73□□□□□ -1.49
GFRA3O60609 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
GFRA3O60609 SNORD116-21-201ENST00000384507 92 ntBASIC5.73□□□□□ -1.49
GFRA3O60609 HSPE1P8-201ENST00000406997 288 ntBASIC5.73□□□□□ -1.49
GFRA3O60609 AC068138.1-201ENST00000412635 217 ntBASIC5.73□□□□□ -1.49
GFRA3O60609 AC234779.1-201ENST00000425910 285 ntBASIC5.73□□□□□ -1.49
GFRA3O60609 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.73□□□□□ -1.49
GFRA3O60609 Z82210.1-201ENST00000440037 231 ntBASIC5.73□□□□□ -1.49
GFRA3O60609 RPL26P6-201ENST00000440913 438 ntBASIC5.73□□□□□ -1.49
GFRA3O60609 AC079354.2-201ENST00000453523 154 ntBASIC5.73□□□□□ -1.49
GFRA3O60609 AC006511.1-201ENST00000470614 315 ntBASIC5.73□□□□□ -1.49
GFRA3O60609 RN7SL561P-201ENST00000488553 281 ntBASIC5.73□□□□□ -1.49
GFRA3O60609 SNORD33.1-201ENST00000516213 88 ntBASIC5.73□□□□□ -1.49
GFRA3O60609 snoMBII-202.2-201ENST00000517263 86 ntBASIC5.73□□□□□ -1.49
GFRA3O60609 SOD1P3-201ENST00000518682 454 ntBASIC5.73□□□□□ -1.49
GFRA3O60609 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.73□□□□□ -1.49
GFRA3O60609 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.73□□□□□ -1.49
GFRA3O60609 AC126177.5-201ENST00000549599 178 ntBASIC5.73□□□□□ -1.49
GFRA3O60609 MRPS21P7-201ENST00000566937 238 ntBASIC5.73□□□□□ -1.49
GFRA3O60609 MIR3121-201ENST00000579680 77 ntBASIC5.73□□□□□ -1.49
GFRA3O60609 SNORD39.4-201ENST00000620099 78 ntBASIC5.73□□□□□ -1.49
GFRA3O60609 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC5.73□□□□□ -1.49
GFRA3O60609 AL031601.2-202ENST00000622650 282 ntBASIC5.73□□□□□ -1.49
GFRA3O60609 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC5.73□□□□□ -1.49
GFRA3O60609 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
GFRA3O60609 AC097634.1-201ENST00000604491 2467 ntBASIC5.73□□□□□ -1.49
GFRA3O60609 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC5.73□□□□□ -1.49
GFRA3O60609 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
GFRA3O60609 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
GFRA3O60609 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
GFRA3O60609 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.73□□□□□ -1.49
GFRA3O60609 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.73□□□□□ -1.49
GFRA3O60609 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
GFRA3O60609 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC5.73□□□□□ -1.49
GFRA3O60609 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
GFRA3O60609 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.73□□□□□ -1.49
GFRA3O60609 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.73□□□□□ -1.49
GFRA3O60609 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC5.73□□□□□ -1.49
GFRA3O60609 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
GFRA3O60609 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
GFRA3O60609 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
GFRA3O60609 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC5.72□□□□□ -1.49
GFRA3O60609 AC007842.1-201ENST00000597336 2039 ntBASIC5.72□□□□□ -1.49
GFRA3O60609 ADAM5-202ENST00000399789 1942 ntBASIC5.72□□□□□ -1.49
GFRA3O60609 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.72□□□□□ -1.49
GFRA3O60609 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
GFRA3O60609 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
GFRA3O60609 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
GFRA3O60609 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
GFRA3O60609 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
GFRA3O60609 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
GFRA3O60609 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
GFRA3O60609 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
GFRA3O60609 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
GFRA3O60609 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
GFRA3O60609 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
GFRA3O60609 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.72□□□□□ -1.49
GFRA3O60609 RNVU1-6-201ENST00000364688 164 ntBASIC5.72□□□□□ -1.49
GFRA3O60609 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
GFRA3O60609 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
GFRA3O60609 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
GFRA3O60609 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.72□□□□□ -1.49
GFRA3O60609 BX284632.1-201ENST00000478218 541 ntBASIC5.72□□□□□ -1.49
GFRA3O60609 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.72□□□□□ -1.49
GFRA3O60609 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
GFRA3O60609 RN7SKP98-201ENST00000517070 156 ntBASIC5.72□□□□□ -1.49
GFRA3O60609 AC090877.1-201ENST00000561418 344 ntBASIC5.72□□□□□ -1.49
GFRA3O60609 AC136624.4-201ENST00000573044 370 ntBASIC5.72□□□□□ -1.49
GFRA3O60609 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC5.72□□□□□ -1.49
GFRA3O60609 AL670379.3-201ENST00000605040 251 ntBASIC5.72□□□□□ -1.49
GFRA3O60609 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.72□□□□□ -1.49
GFRA3O60609 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
GFRA3O60609 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
GFRA3O60609 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
GFRA3O60609 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
GFRA3O60609 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
GFRA3O60609 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
GFRA3O60609 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
GFRA3O60609 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC5.72□□□□□ -1.49
GFRA3O60609 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
GFRA3O60609 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
GFRA3O60609 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
GFRA3O60609 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
GFRA3O60609 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC5.71□□□□□ -1.49
GFRA3O60609 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
GFRA3O60609 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
GFRA3O60609 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
GFRA3O60609 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.71□□□□□ -1.5
GFRA3O60609 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC5.71□□□□□ -1.5
GFRA3O60609 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
GFRA3O60609 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.71□□□□□ -1.5
GFRA3O60609 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
GFRA3O60609 RNU6-235P-201ENST00000362644 107 ntBASIC5.71□□□□□ -1.5
GFRA3O60609 Y_RNA.219-201ENST00000364232 113 ntBASIC5.71□□□□□ -1.5
GFRA3O60609 Y_RNA.221-201ENST00000364248 96 ntBASIC5.71□□□□□ -1.5
GFRA3O60609 RNA5SP131-201ENST00000365452 119 ntBASIC5.71□□□□□ -1.5
GFRA3O60609 SNORA51.8-201ENST00000384234 132 ntBASIC5.71□□□□□ -1.5
GFRA3O60609 RNU6-1152P-201ENST00000384576 107 ntBASIC5.71□□□□□ -1.5
GFRA3O60609 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms