Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 AC091304.6-201ENST00000619761 202 ntBASIC3.35□□□□□ -1.87
TRIM49BA6NDI0 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TRIM49BA6NDI0 AC109454.4-201ENST00000623411 649 ntBASIC3.35□□□□□ -1.87
TRIM49BA6NDI0 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.35□□□□□ -1.87
TRIM49BA6NDI0 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.35□□□□□ -1.87
TRIM49BA6NDI0 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.35□□□□□ -1.87
TRIM49BA6NDI0 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.35□□□□□ -1.87
TRIM49BA6NDI0 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TRIM49BA6NDI0 AC005183.1-201ENST00000603687 1979 ntBASIC3.34□□□□□ -1.87
TRIM49BA6NDI0 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
TRIM49BA6NDI0 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TRIM49BA6NDI0 RNU6-657P-201ENST00000383904 107 ntBASIC3.34□□□□□ -1.87
TRIM49BA6NDI0 U3.29-201ENST00000391296 212 ntBASIC3.34□□□□□ -1.87
TRIM49BA6NDI0 RNU6-757P-201ENST00000410334 100 ntBASIC3.34□□□□□ -1.87
TRIM49BA6NDI0 RNU2-28P-201ENST00000410457 189 ntBASIC3.34□□□□□ -1.87
TRIM49BA6NDI0 RNU2-42P-201ENST00000410697 113 ntBASIC3.34□□□□□ -1.87
TRIM49BA6NDI0 RNA5SP120-201ENST00000410900 112 ntBASIC3.34□□□□□ -1.87
TRIM49BA6NDI0 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TRIM49BA6NDI0 RPL23AP69-201ENST00000431134 458 ntBASIC3.34□□□□□ -1.87
TRIM49BA6NDI0 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.34□□□□□ -1.87
TRIM49BA6NDI0 MTND4LP10-201ENST00000435146 291 ntBASIC3.34□□□□□ -1.87
TRIM49BA6NDI0 SNRPEP4-201ENST00000435815 279 ntBASIC3.34□□□□□ -1.87
TRIM49BA6NDI0 MTCYBP34-201ENST00000439552 670 ntBASIC3.34□□□□□ -1.87
TRIM49BA6NDI0 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.34□□□□□ -1.87
TRIM49BA6NDI0 ART2BP-201ENST00000453501 499 ntBASIC3.34□□□□□ -1.87
TRIM49BA6NDI0 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.34□□□□□ -1.87
TRIM49BA6NDI0 RNU6-27P-201ENST00000516146 107 ntBASIC3.34□□□□□ -1.87
TRIM49BA6NDI0 SNORA31.8-201ENST00000516327 108 ntBASIC3.34□□□□□ -1.87
TRIM49BA6NDI0 SNORA74D-201ENST00000516404 141 ntBASIC3.34□□□□□ -1.87
TRIM49BA6NDI0 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.34□□□□□ -1.87
TRIM49BA6NDI0 AC087373.1-201ENST00000524920 491 ntBASIC3.34□□□□□ -1.87
TRIM49BA6NDI0 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.34□□□□□ -1.87
TRIM49BA6NDI0 AL389895.1-201ENST00000554127 252 ntBASIC3.34□□□□□ -1.87
TRIM49BA6NDI0 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.34□□□□□ -1.87
TRIM49BA6NDI0 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.34□□□□□ -1.87
TRIM49BA6NDI0 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.34□□□□□ -1.87
TRIM49BA6NDI0 AL031985.2-201ENST00000600955 480 ntBASIC3.34□□□□□ -1.87
TRIM49BA6NDI0 AC021171.1-201ENST00000603137 706 ntBASIC3.34□□□□□ -1.87
TRIM49BA6NDI0 AP001330.4-201ENST00000604350 154 ntBASIC3.34□□□□□ -1.87
TRIM49BA6NDI0 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.34□□□□□ -1.87
TRIM49BA6NDI0 AC093783.1-201ENST00000612976 329 ntBASIC3.34□□□□□ -1.87
TRIM49BA6NDI0 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
TRIM49BA6NDI0 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.34□□□□□ -1.88
TRIM49BA6NDI0 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
TRIM49BA6NDI0 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.33□□□□□ -1.88
TRIM49BA6NDI0 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TRIM49BA6NDI0 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
TRIM49BA6NDI0 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TRIM49BA6NDI0 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
TRIM49BA6NDI0 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
TRIM49BA6NDI0 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
TRIM49BA6NDI0 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
TRIM49BA6NDI0 OR5H2-201ENST00000355273 945 ntBASIC3.33□□□□□ -1.88
TRIM49BA6NDI0 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
TRIM49BA6NDI0 MIR483-201ENST00000385070 76 ntBASIC3.33□□□□□ -1.88
TRIM49BA6NDI0 AC109780.2-201ENST00000413467 845 ntBASIC3.33□□□□□ -1.88
TRIM49BA6NDI0 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.33□□□□□ -1.88
TRIM49BA6NDI0 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.33□□□□□ -1.88
TRIM49BA6NDI0 AC092634.6-201ENST00000418558 192 ntBASIC3.33□□□□□ -1.88
TRIM49BA6NDI0 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.33□□□□□ -1.88
TRIM49BA6NDI0 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC3.33□□□□□ -1.88
TRIM49BA6NDI0 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.33□□□□□ -1.88
TRIM49BA6NDI0 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.33□□□□□ -1.88
TRIM49BA6NDI0 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.33□□□□□ -1.88
TRIM49BA6NDI0 SEPT7P5-201ENST00000434048 306 ntBASIC3.33□□□□□ -1.88
TRIM49BA6NDI0 MTND2P22-201ENST00000444325 1033 ntBASIC3.33□□□□□ -1.88
TRIM49BA6NDI0 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.33□□□□□ -1.88
TRIM49BA6NDI0 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
TRIM49BA6NDI0 MTCYBP11-201ENST00000447254 1109 ntBASIC3.33□□□□□ -1.88
TRIM49BA6NDI0 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.33□□□□□ -1.88
TRIM49BA6NDI0 RPL37P4-201ENST00000448908 268 ntBASIC3.33□□□□□ -1.88
TRIM49BA6NDI0 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.33□□□□□ -1.88
TRIM49BA6NDI0 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.33□□□□□ -1.88
TRIM49BA6NDI0 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.33□□□□□ -1.88
TRIM49BA6NDI0 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC3.33□□□□□ -1.88
TRIM49BA6NDI0 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.33□□□□□ -1.88
TRIM49BA6NDI0 HMGB1P25-201ENST00000468402 607 ntBASIC3.33□□□□□ -1.88
TRIM49BA6NDI0 AC004263.1-201ENST00000479327 332 ntBASIC3.33□□□□□ -1.88
TRIM49BA6NDI0 RN7SL633P-201ENST00000488974 297 ntBASIC3.33□□□□□ -1.88
TRIM49BA6NDI0 RN7SL504P-201ENST00000494496 287 ntBASIC3.33□□□□□ -1.88
TRIM49BA6NDI0 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
TRIM49BA6NDI0 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.33□□□□□ -1.88
TRIM49BA6NDI0 PHBP14-201ENST00000512887 367 ntBASIC3.33□□□□□ -1.88
TRIM49BA6NDI0 RN7SKP43-201ENST00000516173 320 ntBASIC3.33□□□□□ -1.88
TRIM49BA6NDI0 RNY4P37-201ENST00000516225 96 ntBASIC3.33□□□□□ -1.88
TRIM49BA6NDI0 SNORA48.10-201ENST00000516965 160 ntBASIC3.33□□□□□ -1.88
TRIM49BA6NDI0 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.33□□□□□ -1.88
TRIM49BA6NDI0 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.33□□□□□ -1.88
TRIM49BA6NDI0 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.33□□□□□ -1.88
TRIM49BA6NDI0 AC090502.2-201ENST00000549267 280 ntBASIC3.33□□□□□ -1.88
TRIM49BA6NDI0 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.33□□□□□ -1.88
TRIM49BA6NDI0 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.33□□□□□ -1.88
TRIM49BA6NDI0 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.33□□□□□ -1.88
TRIM49BA6NDI0 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.33□□□□□ -1.88
TRIM49BA6NDI0 AL845331.3-202ENST00000562856 261 ntBASIC3.33□□□□□ -1.88
TRIM49BA6NDI0 MIR3912-201ENST00000577566 105 ntBASIC3.33□□□□□ -1.88
TRIM49BA6NDI0 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.33□□□□□ -1.88
TRIM49BA6NDI0 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.33□□□□□ -1.88
TRIM49BA6NDI0 TUSC7.1-201ENST00000610969 165 ntBASIC3.33□□□□□ -1.88
TRIM49BA6NDI0 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 132 ms