Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NINLQ9Y2I6 RNU6-272P-201ENST00000411028 104 ntBASIC3.43□□□□□ -1.86
NINLQ9Y2I6 USP9YP20-201ENST00000419224 558 ntBASIC3.43□□□□□ -1.86
NINLQ9Y2I6 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.43□□□□□ -1.86
NINLQ9Y2I6 AL592045.1-201ENST00000429867 352 ntBASIC3.43□□□□□ -1.86
NINLQ9Y2I6 RPL36P19-201ENST00000430744 301 ntBASIC3.43□□□□□ -1.86
NINLQ9Y2I6 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.43□□□□□ -1.86
NINLQ9Y2I6 SYPL1P1-201ENST00000473622 768 ntBASIC3.43□□□□□ -1.86
NINLQ9Y2I6 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.43□□□□□ -1.86
NINLQ9Y2I6 RPL23AP55-201ENST00000498163 452 ntBASIC3.43□□□□□ -1.86
NINLQ9Y2I6 RNF138P1-201ENST00000502765 546 ntBASIC3.43□□□□□ -1.86
NINLQ9Y2I6 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.43□□□□□ -1.86
NINLQ9Y2I6 RNU6-488P-201ENST00000515918 99 ntBASIC3.43□□□□□ -1.86
NINLQ9Y2I6 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.43□□□□□ -1.86
NINLQ9Y2I6 AP000867.2-201ENST00000532468 320 ntBASIC3.43□□□□□ -1.86
NINLQ9Y2I6 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.43□□□□□ -1.86
NINLQ9Y2I6 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.43□□□□□ -1.86
NINLQ9Y2I6 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.43□□□□□ -1.86
NINLQ9Y2I6 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NINLQ9Y2I6 AL359893.1-201ENST00000447628 1580 ntBASIC3.42□□□□□ -1.86
NINLQ9Y2I6 OR5T3-201ENST00000303059 1023 ntBASIC3.42□□□□□ -1.86
NINLQ9Y2I6 Y_RNA.140-201ENST00000363474 103 ntBASIC3.42□□□□□ -1.86
NINLQ9Y2I6 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.42□□□□□ -1.86
NINLQ9Y2I6 RNU6-253P-201ENST00000384730 105 ntBASIC3.42□□□□□ -1.86
NINLQ9Y2I6 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
NINLQ9Y2I6 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.42□□□□□ -1.86
NINLQ9Y2I6 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.42□□□□□ -1.86
NINLQ9Y2I6 AC093422.3-201ENST00000428506 305 ntBASIC3.42□□□□□ -1.86
NINLQ9Y2I6 AC109583.1-201ENST00000432156 268 ntBASIC3.42□□□□□ -1.86
NINLQ9Y2I6 RPL30P9-201ENST00000465586 330 ntBASIC3.42□□□□□ -1.86
NINLQ9Y2I6 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
NINLQ9Y2I6 HMGB3P15-201ENST00000507326 574 ntBASIC3.42□□□□□ -1.86
NINLQ9Y2I6 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
NINLQ9Y2I6 AC234781.5-201ENST00000508429 271 ntBASIC3.42□□□□□ -1.86
NINLQ9Y2I6 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
NINLQ9Y2I6 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.42□□□□□ -1.86
NINLQ9Y2I6 AC079228.1-201ENST00000624774 1049 ntBASIC3.42□□□□□ -1.86
NINLQ9Y2I6 AL590396.2-201ENST00000636511 1041 ntBASIC3.42□□□□□ -1.86
NINLQ9Y2I6 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.42□□□□□ -1.86
NINLQ9Y2I6 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.42□□□□□ -1.86
NINLQ9Y2I6 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NINLQ9Y2I6 AL121972.1-201ENST00000402023 252 ntBASIC3.41□□□□□ -1.86
NINLQ9Y2I6 SFR1P1-201ENST00000403720 688 ntBASIC3.41□□□□□ -1.86
NINLQ9Y2I6 MORF4L1P6-201ENST00000418771 268 ntBASIC3.41□□□□□ -1.86
NINLQ9Y2I6 MORF4L1P7-201ENST00000426038 703 ntBASIC3.41□□□□□ -1.86
NINLQ9Y2I6 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC3.41□□□□□ -1.86
NINLQ9Y2I6 ELOCP13-201ENST00000443934 329 ntBASIC3.41□□□□□ -1.86
NINLQ9Y2I6 MTND1P33-201ENST00000446251 917 ntBASIC3.41□□□□□ -1.86
NINLQ9Y2I6 HMGB1P15-201ENST00000453854 435 ntBASIC3.41□□□□□ -1.86
NINLQ9Y2I6 HMGN2P16-201ENST00000456802 261 ntBASIC3.41□□□□□ -1.86
NINLQ9Y2I6 AC008571.1-201ENST00000467232 300 ntBASIC3.41□□□□□ -1.86
NINLQ9Y2I6 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.41□□□□□ -1.86
NINLQ9Y2I6 AC104108.1-201ENST00000509930 412 ntBASIC3.41□□□□□ -1.86
NINLQ9Y2I6 AC026412.2-201ENST00000512270 1075 ntBASIC3.41□□□□□ -1.86
NINLQ9Y2I6 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.41□□□□□ -1.86
NINLQ9Y2I6 MTCO3P24-201ENST00000572729 782 ntBASIC3.41□□□□□ -1.86
NINLQ9Y2I6 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
NINLQ9Y2I6 AC104237.2-201ENST00000612456 443 ntBASIC3.41□□□□□ -1.86
NINLQ9Y2I6 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC3.41□□□□□ -1.86
NINLQ9Y2I6 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.41□□□□□ -1.86
NINLQ9Y2I6 AL356118.1-201ENST00000635272 1078 ntBASIC3.41□□□□□ -1.86
NINLQ9Y2I6 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.41□□□□□ -1.86
NINLQ9Y2I6 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
NINLQ9Y2I6 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
NINLQ9Y2I6 AL354719.1-201ENST00000406535 843 ntBASIC3.4□□□□□ -1.86
NINLQ9Y2I6 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.4□□□□□ -1.86
NINLQ9Y2I6 HIGD1AP2-201ENST00000446367 280 ntBASIC3.4□□□□□ -1.86
NINLQ9Y2I6 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.4□□□□□ -1.86
NINLQ9Y2I6 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.4□□□□□ -1.86
NINLQ9Y2I6 RPL21P104-201ENST00000464143 478 ntBASIC3.4□□□□□ -1.86
NINLQ9Y2I6 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.4□□□□□ -1.86
NINLQ9Y2I6 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.4□□□□□ -1.86
NINLQ9Y2I6 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.4□□□□□ -1.86
NINLQ9Y2I6 AC239860.2-201ENST00000525886 270 ntBASIC3.4□□□□□ -1.86
NINLQ9Y2I6 AC018630.1-201ENST00000541376 925 ntBASIC3.4□□□□□ -1.86
NINLQ9Y2I6 AC128657.1-201ENST00000549459 145 ntBASIC3.4□□□□□ -1.86
NINLQ9Y2I6 AC107954.1-201ENST00000565906 727 ntBASIC3.4□□□□□ -1.86
NINLQ9Y2I6 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.4□□□□□ -1.86
NINLQ9Y2I6 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
NINLQ9Y2I6 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
NINLQ9Y2I6 AC092881.1-201ENST00000638218 2733 ntBASIC3.4□□□□□ -1.87
NINLQ9Y2I6 AP001350.1-201ENST00000601906 1524 ntBASIC3.4□□□□□ -1.87
NINLQ9Y2I6 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
NINLQ9Y2I6 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
NINLQ9Y2I6 RNU6-1151P-201ENST00000384684 107 ntBASIC3.39□□□□□ -1.87
NINLQ9Y2I6 RNU2-71P-201ENST00000411395 189 ntBASIC3.39□□□□□ -1.87
NINLQ9Y2I6 RPS3AP9-201ENST00000417027 792 ntBASIC3.39□□□□□ -1.87
NINLQ9Y2I6 TOMM22P1-201ENST00000418578 312 ntBASIC3.39□□□□□ -1.87
NINLQ9Y2I6 ZFAND6P1-201ENST00000434138 605 ntBASIC3.39□□□□□ -1.87
NINLQ9Y2I6 HMGB1P25-201ENST00000468402 607 ntBASIC3.39□□□□□ -1.87
NINLQ9Y2I6 RPL23AP45-201ENST00000476406 468 ntBASIC3.39□□□□□ -1.87
NINLQ9Y2I6 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.39□□□□□ -1.87
NINLQ9Y2I6 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.39□□□□□ -1.87
NINLQ9Y2I6 AP004371.1-201ENST00000525240 214 ntBASIC3.39□□□□□ -1.87
NINLQ9Y2I6 SYF2P1-201ENST00000550658 413 ntBASIC3.39□□□□□ -1.87
NINLQ9Y2I6 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.39□□□□□ -1.87
NINLQ9Y2I6 RPL23AP84-201ENST00000571193 464 ntBASIC3.39□□□□□ -1.87
NINLQ9Y2I6 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.39□□□□□ -1.87
NINLQ9Y2I6 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.39□□□□□ -1.87
NINLQ9Y2I6 MIR1291-201ENST00000627649 87 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms