Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 RPL21P132-201ENST00000331267 462 ntBASIC3.39□□□□□ -1.87
CHCHD3Q9NX63 RNU6-289P-201ENST00000364093 107 ntBASIC3.39□□□□□ -1.87
CHCHD3Q9NX63 RNU6-637P-201ENST00000384050 107 ntBASIC3.39□□□□□ -1.87
CHCHD3Q9NX63 MIR199A2-201ENST00000385289 110 ntBASIC3.39□□□□□ -1.87
CHCHD3Q9NX63 OR6C69P-201ENST00000394268 893 ntBASIC3.39□□□□□ -1.87
CHCHD3Q9NX63 U3.42-201ENST00000408746 214 ntBASIC3.39□□□□□ -1.87
CHCHD3Q9NX63 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.39□□□□□ -1.87
CHCHD3Q9NX63 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.39□□□□□ -1.87
CHCHD3Q9NX63 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.39□□□□□ -1.87
CHCHD3Q9NX63 RPL26P6-201ENST00000440913 438 ntBASIC3.39□□□□□ -1.87
CHCHD3Q9NX63 CDC27P1-201ENST00000445384 715 ntBASIC3.39□□□□□ -1.87
CHCHD3Q9NX63 AL109741.2-201ENST00000455561 343 ntBASIC3.39□□□□□ -1.87
CHCHD3Q9NX63 OR6K1P-201ENST00000456766 971 ntBASIC3.39□□□□□ -1.87
CHCHD3Q9NX63 RPL30P9-201ENST00000465586 330 ntBASIC3.39□□□□□ -1.87
CHCHD3Q9NX63 UQCRHP4-201ENST00000471686 272 ntBASIC3.39□□□□□ -1.87
CHCHD3Q9NX63 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
CHCHD3Q9NX63 RN7SL499P-201ENST00000481141 276 ntBASIC3.39□□□□□ -1.87
CHCHD3Q9NX63 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.39□□□□□ -1.87
CHCHD3Q9NX63 AP003461.1-201ENST00000528866 78 ntBASIC3.39□□□□□ -1.87
CHCHD3Q9NX63 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.39□□□□□ -1.87
CHCHD3Q9NX63 AC090888.2-201ENST00000559765 1144 ntBASIC3.39□□□□□ -1.87
CHCHD3Q9NX63 RPL23AP84-201ENST00000571193 464 ntBASIC3.39□□□□□ -1.87
CHCHD3Q9NX63 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CHCHD3Q9NX63 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.39□□□□□ -1.87
CHCHD3Q9NX63 AC068790.4-201ENST00000602474 263 ntBASIC3.39□□□□□ -1.87
CHCHD3Q9NX63 AP000254.1-201ENST00000609934 520 ntBASIC3.39□□□□□ -1.87
CHCHD3Q9NX63 AL138880.2-201ENST00000616214 239 ntBASIC3.39□□□□□ -1.87
CHCHD3Q9NX63 AC007490.1-201ENST00000624321 703 ntBASIC3.39□□□□□ -1.87
CHCHD3Q9NX63 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.39□□□□□ -1.87
CHCHD3Q9NX63 AC009902.3-201ENST00000606235 2172 ntBASIC3.39□□□□□ -1.87
CHCHD3Q9NX63 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CHCHD3Q9NX63 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
CHCHD3Q9NX63 AC073073.2-201ENST00000609827 2578 ntBASIC3.38□□□□□ -1.87
CHCHD3Q9NX63 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CHCHD3Q9NX63 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
CHCHD3Q9NX63 AL356274.2-201ENST00000624379 3752 ntBASIC3.38□□□□□ -1.87
CHCHD3Q9NX63 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CHCHD3Q9NX63 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
CHCHD3Q9NX63 Y_RNA.18-201ENST00000362461 102 ntBASIC3.38□□□□□ -1.87
CHCHD3Q9NX63 RNU5A-1-201ENST00000362698 116 ntBASIC3.38□□□□□ -1.87
CHCHD3Q9NX63 RNY4P24-201ENST00000362735 96 ntBASIC3.38□□□□□ -1.87
CHCHD3Q9NX63 SNORD56.3-201ENST00000363507 71 ntBASIC3.38□□□□□ -1.87
CHCHD3Q9NX63 RNA5SP88-201ENST00000365560 109 ntBASIC3.38□□□□□ -1.87
CHCHD3Q9NX63 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.38□□□□□ -1.87
CHCHD3Q9NX63 RNU5A-2P-201ENST00000384337 116 ntBASIC3.38□□□□□ -1.87
CHCHD3Q9NX63 SNORA70C-201ENST00000384538 135 ntBASIC3.38□□□□□ -1.87
CHCHD3Q9NX63 RPS4XP3-201ENST00000398541 413 ntBASIC3.38□□□□□ -1.87
CHCHD3Q9NX63 RN7SKP58-201ENST00000411010 305 ntBASIC3.38□□□□□ -1.87
CHCHD3Q9NX63 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.38□□□□□ -1.87
CHCHD3Q9NX63 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.38□□□□□ -1.87
CHCHD3Q9NX63 PPP1R11P2-201ENST00000423543 382 ntBASIC3.38□□□□□ -1.87
CHCHD3Q9NX63 UBE2D3P2-201ENST00000424409 445 ntBASIC3.38□□□□□ -1.87
CHCHD3Q9NX63 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.38□□□□□ -1.87
CHCHD3Q9NX63 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC3.38□□□□□ -1.87
CHCHD3Q9NX63 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.38□□□□□ -1.87
CHCHD3Q9NX63 NDUFB4P6-201ENST00000436819 366 ntBASIC3.38□□□□□ -1.87
CHCHD3Q9NX63 AL354941.1-201ENST00000438600 464 ntBASIC3.38□□□□□ -1.87
CHCHD3Q9NX63 CBX1P1-201ENST00000440184 427 ntBASIC3.38□□□□□ -1.87
CHCHD3Q9NX63 RPL23AP58-201ENST00000440453 469 ntBASIC3.38□□□□□ -1.87
CHCHD3Q9NX63 AL590664.1-201ENST00000448065 339 ntBASIC3.38□□□□□ -1.87
CHCHD3Q9NX63 AC007967.1-201ENST00000455422 1159 ntBASIC3.38□□□□□ -1.87
CHCHD3Q9NX63 HSPE1P6-201ENST00000479457 291 ntBASIC3.38□□□□□ -1.87
CHCHD3Q9NX63 AC041039.1-201ENST00000485656 536 ntBASIC3.38□□□□□ -1.87
CHCHD3Q9NX63 RPS27AP13-201ENST00000498403 237 ntBASIC3.38□□□□□ -1.87
CHCHD3Q9NX63 CBX3P3-201ENST00000508108 532 ntBASIC3.38□□□□□ -1.87
CHCHD3Q9NX63 MTCYBP43-201ENST00000513621 740 ntBASIC3.38□□□□□ -1.87
CHCHD3Q9NX63 MTND5P4-201ENST00000514978 288 ntBASIC3.38□□□□□ -1.87
CHCHD3Q9NX63 MRPS36P3-201ENST00000519284 130 ntBASIC3.38□□□□□ -1.87
CHCHD3Q9NX63 EEF1A1P37-201ENST00000522748 715 ntBASIC3.38□□□□□ -1.87
CHCHD3Q9NX63 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.38□□□□□ -1.87
CHCHD3Q9NX63 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.38□□□□□ -1.87
CHCHD3Q9NX63 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.38□□□□□ -1.87
CHCHD3Q9NX63 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.38□□□□□ -1.87
CHCHD3Q9NX63 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.38□□□□□ -1.87
CHCHD3Q9NX63 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.38□□□□□ -1.87
CHCHD3Q9NX63 MIR4697-201ENST00000582977 78 ntBASIC3.38□□□□□ -1.87
CHCHD3Q9NX63 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.38□□□□□ -1.87
CHCHD3Q9NX63 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.38□□□□□ -1.87
CHCHD3Q9NX63 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.38□□□□□ -1.87
CHCHD3Q9NX63 AC006116.5-201ENST00000591936 559 ntBASIC3.38□□□□□ -1.87
CHCHD3Q9NX63 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.38□□□□□ -1.87
CHCHD3Q9NX63 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.38□□□□□ -1.87
CHCHD3Q9NX63 AC024560.3-201ENST00000608482 349 ntBASIC3.38□□□□□ -1.87
CHCHD3Q9NX63 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CHCHD3Q9NX63 MIR8059-201ENST00000620427 81 ntBASIC3.38□□□□□ -1.87
CHCHD3Q9NX63 AC243312.2-201ENST00000623340 601 ntBASIC3.38□□□□□ -1.87
CHCHD3Q9NX63 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CHCHD3Q9NX63 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.38□□□□□ -1.87
CHCHD3Q9NX63 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.38□□□□□ -1.87
CHCHD3Q9NX63 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CHCHD3Q9NX63 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.37□□□□□ -1.87
CHCHD3Q9NX63 DDX10P1-201ENST00000448545 1933 ntBASIC3.37□□□□□ -1.87
CHCHD3Q9NX63 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.37□□□□□ -1.87
CHCHD3Q9NX63 RNU6-253P-201ENST00000384730 105 ntBASIC3.37□□□□□ -1.87
CHCHD3Q9NX63 MIR493-201ENST00000385254 89 ntBASIC3.37□□□□□ -1.87
CHCHD3Q9NX63 RNA5SP424-201ENST00000390988 115 ntBASIC3.37□□□□□ -1.87
CHCHD3Q9NX63 RNU6-754P-201ENST00000391166 107 ntBASIC3.37□□□□□ -1.87
CHCHD3Q9NX63 RSL24D1P4-201ENST00000400938 484 ntBASIC3.37□□□□□ -1.87
CHCHD3Q9NX63 RNA5SP492-201ENST00000411330 114 ntBASIC3.37□□□□□ -1.87
CHCHD3Q9NX63 AC093578.1-201ENST00000415219 368 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms