Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.17□□□□□ -1.9
CCDC28BQ9BUN5 MIR5186-201ENST00000577504 120 ntBASIC3.17□□□□□ -1.9
CCDC28BQ9BUN5 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC28BQ9BUN5 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.17□□□□□ -1.9
CCDC28BQ9BUN5 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC28BQ9BUN5 AC121247.2-201ENST00000604776 136 ntBASIC3.17□□□□□ -1.9
CCDC28BQ9BUN5 AL009028.1-201ENST00000604895 802 ntBASIC3.17□□□□□ -1.9
CCDC28BQ9BUN5 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC28BQ9BUN5 AC048344.4-201ENST00000619744 527 ntBASIC3.17□□□□□ -1.9
CCDC28BQ9BUN5 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC28BQ9BUN5 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
CCDC28BQ9BUN5 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC28BQ9BUN5 MTCO1P23-201ENST00000415223 1526 ntBASIC3.17□□□□□ -1.9
CCDC28BQ9BUN5 ZNF734P-201ENST00000419494 1534 ntBASIC3.17□□□□□ -1.9
CCDC28BQ9BUN5 AL365440.1-201ENST00000436135 2167 ntBASIC3.17□□□□□ -1.9
CCDC28BQ9BUN5 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 AL445523.1-201ENST00000451184 1362 ntBASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 AC093908.1-201ENST00000623125 8092 ntBASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 RNU6-553P-201ENST00000364047 96 ntBASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 SNORD17-201ENST00000390930 237 ntBASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 AL049693.1-201ENST00000402760 611 ntBASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 RPL23AP39-201ENST00000415533 405 ntBASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 CRYBB2P1-203ENST00000415709 538 ntBASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 AC009518.2-201ENST00000418056 731 ntBASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 RPL23AP33-201ENST00000442301 452 ntBASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 RPL39P40-201ENST00000445481 146 ntBASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 RPL7P52-201ENST00000449200 742 ntBASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 SSXP4-201ENST00000451349 245 ntBASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 RBMY2UP-201ENST00000453474 324 ntBASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 SBDSP1-204ENST00000453858 737 ntBASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 RPL21P104-201ENST00000464143 478 ntBASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 AL136126.1-201ENST00000473603 402 ntBASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 AC090453.1-201ENST00000495560 436 ntBASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 AC093767.1-201ENST00000504523 156 ntBASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 AC105313.1-201ENST00000509121 353 ntBASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 APOOP4-201ENST00000513530 597 ntBASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 HIGD1AP3-201ENST00000515857 278 ntBASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 IGKV2-26-201ENST00000518305 343 ntBASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 AC007954.1-201ENST00000554198 494 ntBASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 LARP7P2-201ENST00000575306 125 ntBASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 AC090616.5-202ENST00000582111 297 ntBASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 AC022916.3-201ENST00000592961 742 ntBASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 AL355812.1-201ENST00000603215 216 ntBASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 AC024560.3-201ENST00000608482 349 ntBASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 AC025588.4-201ENST00000615802 908 ntBASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 AL031667.3-201ENST00000620124 655 ntBASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 AC026422.1-201ENST00000623961 452 ntBASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 AC079228.1-201ENST00000624774 1049 ntBASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 AL355596.1-201ENST00000565399 3996 ntBASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 AC012321.1-201ENST00000561622 1588 ntBASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC28BQ9BUN5 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.15□□□□□ -1.9
CCDC28BQ9BUN5 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CCDC28BQ9BUN5 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CCDC28BQ9BUN5 RPL32P3-201ENST00000359025 275 ntBASIC3.15□□□□□ -1.91
CCDC28BQ9BUN5 RNU6-500P-201ENST00000362349 107 ntBASIC3.15□□□□□ -1.91
CCDC28BQ9BUN5 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
CCDC28BQ9BUN5 RPL31P1-201ENST00000398116 372 ntBASIC3.15□□□□□ -1.91
CCDC28BQ9BUN5 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.15□□□□□ -1.91
CCDC28BQ9BUN5 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CCDC28BQ9BUN5 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.15□□□□□ -1.91
CCDC28BQ9BUN5 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.15□□□□□ -1.91
CCDC28BQ9BUN5 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC28BQ9BUN5 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.15□□□□□ -1.91
CCDC28BQ9BUN5 UBE2FP3-201ENST00000436366 524 ntBASIC3.15□□□□□ -1.91
CCDC28BQ9BUN5 MTCYBP39-201ENST00000437562 491 ntBASIC3.15□□□□□ -1.91
CCDC28BQ9BUN5 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms