Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 RPL23AP70-201ENST00000483361 460 ntBASIC2.36□□□□□ -2.03
CDK5RAP2Q96SN8 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.36□□□□□ -2.03
CDK5RAP2Q96SN8 SNRPGP19-201ENST00000603826 189 ntBASIC2.36□□□□□ -2.03
CDK5RAP2Q96SN8 AC019159.1-201ENST00000605094 187 ntBASIC2.36□□□□□ -2.03
CDK5RAP2Q96SN8 AC091834.1-201ENST00000614543 472 ntBASIC2.36□□□□□ -2.03
CDK5RAP2Q96SN8 AC011472.4-201ENST00000615848 491 ntBASIC2.36□□□□□ -2.03
CDK5RAP2Q96SN8 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC2.36□□□□□ -2.03
CDK5RAP2Q96SN8 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.36□□□□□ -2.03
CDK5RAP2Q96SN8 AL136520.1-201ENST00000600311 1322 ntBASIC2.36□□□□□ -2.03
CDK5RAP2Q96SN8 AC080128.1-201ENST00000474389 1917 ntBASIC2.36□□□□□ -2.03
CDK5RAP2Q96SN8 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
CDK5RAP2Q96SN8 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC2.35□□□□□ -2.03
CDK5RAP2Q96SN8 RFESDP1-201ENST00000422350 461 ntBASIC2.35□□□□□ -2.03
CDK5RAP2Q96SN8 MTCO3P30-201ENST00000426425 670 ntBASIC2.35□□□□□ -2.03
CDK5RAP2Q96SN8 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC2.35□□□□□ -2.03
CDK5RAP2Q96SN8 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC2.35□□□□□ -2.03
CDK5RAP2Q96SN8 HMGN2P16-201ENST00000456802 261 ntBASIC2.35□□□□□ -2.03
CDK5RAP2Q96SN8 RNA5SP82-201ENST00000516707 92 ntBASIC2.35□□□□□ -2.03
CDK5RAP2Q96SN8 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.35□□□□□ -2.03
CDK5RAP2Q96SN8 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.35□□□□□ -2.03
CDK5RAP2Q96SN8 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
CDK5RAP2Q96SN8 GNAI2P1-201ENST00000541815 315 ntBASIC2.35□□□□□ -2.03
CDK5RAP2Q96SN8 NOP56P3-201ENST00000549457 385 ntBASIC2.35□□□□□ -2.03
CDK5RAP2Q96SN8 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.35□□□□□ -2.03
CDK5RAP2Q96SN8 AC090616.5-202ENST00000582111 297 ntBASIC2.35□□□□□ -2.03
CDK5RAP2Q96SN8 MIR548Y-201ENST00000582739 110 ntBASIC2.35□□□□□ -2.03
CDK5RAP2Q96SN8 AC245128.3-201ENST00000594721 748 ntBASIC2.35□□□□□ -2.03
CDK5RAP2Q96SN8 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.35□□□□□ -2.03
CDK5RAP2Q96SN8 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CDK5RAP2Q96SN8 AL356292.1-201ENST00000283110 373 ntBASIC2.35□□□□□ -2.03
CDK5RAP2Q96SN8 RNA5SP213-201ENST00000391031 106 ntBASIC2.35□□□□□ -2.03
CDK5RAP2Q96SN8 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CDK5RAP2Q96SN8 FNDC3CP-201ENST00000420795 1155 ntBASIC2.35□□□□□ -2.03
CDK5RAP2Q96SN8 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.35□□□□□ -2.03
CDK5RAP2Q96SN8 SDR42E1P3-201ENST00000438345 502 ntBASIC2.35□□□□□ -2.03
CDK5RAP2Q96SN8 NF1P3-201ENST00000457709 450 ntBASIC2.35□□□□□ -2.03
CDK5RAP2Q96SN8 AC007182.2-201ENST00000489251 402 ntBASIC2.35□□□□□ -2.03
CDK5RAP2Q96SN8 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.35□□□□□ -2.03
CDK5RAP2Q96SN8 RNU6-711P-201ENST00000517255 106 ntBASIC2.35□□□□□ -2.03
CDK5RAP2Q96SN8 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.35□□□□□ -2.03
CDK5RAP2Q96SN8 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.35□□□□□ -2.03
CDK5RAP2Q96SN8 DNAJC8P1-201ENST00000554535 372 ntBASIC2.35□□□□□ -2.03
CDK5RAP2Q96SN8 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
CDK5RAP2Q96SN8 AP002907.1-201ENST00000606361 1430 ntBASIC2.34□□□□□ -2.03
CDK5RAP2Q96SN8 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CDK5RAP2Q96SN8 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
CDK5RAP2Q96SN8 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
CDK5RAP2Q96SN8 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.34□□□□□ -2.03
CDK5RAP2Q96SN8 MTND5P28-201ENST00000438005 1594 ntBASIC2.34□□□□□ -2.03
CDK5RAP2Q96SN8 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.34□□□□□ -2.03
CDK5RAP2Q96SN8 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.34□□□□□ -2.03
CDK5RAP2Q96SN8 U3.37-201ENST00000408528 213 ntBASIC2.34□□□□□ -2.03
CDK5RAP2Q96SN8 AF274854.1-201ENST00000413236 615 ntBASIC2.34□□□□□ -2.03
CDK5RAP2Q96SN8 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.34□□□□□ -2.03
CDK5RAP2Q96SN8 HMGB1P48-201ENST00000446155 598 ntBASIC2.34□□□□□ -2.03
CDK5RAP2Q96SN8 MTCO3P35-201ENST00000485582 781 ntBASIC2.34□□□□□ -2.03
CDK5RAP2Q96SN8 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.34□□□□□ -2.03
CDK5RAP2Q96SN8 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.34□□□□□ -2.03
CDK5RAP2Q96SN8 AL391834.1-201ENST00000609609 560 ntBASIC2.34□□□□□ -2.03
CDK5RAP2Q96SN8 AC093673.2-201ENST00000609674 331 ntBASIC2.34□□□□□ -2.03
CDK5RAP2Q96SN8 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.34□□□□□ -2.03
CDK5RAP2Q96SN8 AC011460.1-201ENST00000636268 1834 ntBASIC2.33□□□□□ -2.04
CDK5RAP2Q96SN8 RNU1-17P-201ENST00000363022 152 ntBASIC2.33□□□□□ -2.04
CDK5RAP2Q96SN8 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CDK5RAP2Q96SN8 RNU4-65P-201ENST00000410473 140 ntBASIC2.33□□□□□ -2.04
CDK5RAP2Q96SN8 RNA5SP338-201ENST00000410495 85 ntBASIC2.33□□□□□ -2.04
CDK5RAP2Q96SN8 SSXP9-201ENST00000417503 292 ntBASIC2.33□□□□□ -2.04
CDK5RAP2Q96SN8 CKS1BP5-201ENST00000434172 273 ntBASIC2.33□□□□□ -2.04
CDK5RAP2Q96SN8 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.33□□□□□ -2.04
CDK5RAP2Q96SN8 AC007677.1-201ENST00000445757 515 ntBASIC2.33□□□□□ -2.04
CDK5RAP2Q96SN8 RNU6-295P-201ENST00000516901 104 ntBASIC2.33□□□□□ -2.04
CDK5RAP2Q96SN8 HSPE1P18-201ENST00000517602 280 ntBASIC2.33□□□□□ -2.04
CDK5RAP2Q96SN8 AC110588.1-201ENST00000559699 137 ntBASIC2.33□□□□□ -2.04
CDK5RAP2Q96SN8 MIR4498-201ENST00000577599 66 ntBASIC2.33□□□□□ -2.04
CDK5RAP2Q96SN8 AL022099.1-201ENST00000604551 712 ntBASIC2.33□□□□□ -2.04
CDK5RAP2Q96SN8 MIR7111-201ENST00000619751 72 ntBASIC2.33□□□□□ -2.04
CDK5RAP2Q96SN8 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
CDK5RAP2Q96SN8 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.33□□□□□ -2.04
CDK5RAP2Q96SN8 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.33□□□□□ -2.04
CDK5RAP2Q96SN8 FAM157B-203ENST00000639350 358 ntBASIC2.33□□□□□ -2.04
CDK5RAP2Q96SN8 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CDK5RAP2Q96SN8 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.33□□□□□ -2.04
CDK5RAP2Q96SN8 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CDK5RAP2Q96SN8 RNU6-50P-201ENST00000362356 103 ntBASIC2.33□□□□□ -2.04
CDK5RAP2Q96SN8 Y_RNA.164-201ENST00000363709 102 ntBASIC2.33□□□□□ -2.04
CDK5RAP2Q96SN8 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC2.33□□□□□ -2.04
CDK5RAP2Q96SN8 HSPE1P1-201ENST00000421494 318 ntBASIC2.33□□□□□ -2.04
CDK5RAP2Q96SN8 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CDK5RAP2Q96SN8 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.33□□□□□ -2.04
CDK5RAP2Q96SN8 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.33□□□□□ -2.04
CDK5RAP2Q96SN8 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CDK5RAP2Q96SN8 HSPE1P20-201ENST00000538133 289 ntBASIC2.33□□□□□ -2.04
CDK5RAP2Q96SN8 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.33□□□□□ -2.04
CDK5RAP2Q96SN8 AC103810.1-201ENST00000579873 453 ntBASIC2.33□□□□□ -2.04
CDK5RAP2Q96SN8 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.33□□□□□ -2.04
CDK5RAP2Q96SN8 HMGN2P28-201ENST00000606102 262 ntBASIC2.33□□□□□ -2.04
CDK5RAP2Q96SN8 AP003122.6-201ENST00000623831 495 ntBASIC2.33□□□□□ -2.04
CDK5RAP2Q96SN8 AL138880.1-201ENST00000405824 642 ntBASIC2.32□□□□□ -2.04
CDK5RAP2Q96SN8 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.32□□□□□ -2.04
CDK5RAP2Q96SN8 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 136.7 ms