Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 AC105429.2-201ENST00000610567 517 ntBASIC5.51□□□□□ -1.53
USP48Q86UV5 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC5.51□□□□□ -1.53
USP48Q86UV5 AC140113.4-201ENST00000622087 222 ntBASIC5.51□□□□□ -1.53
USP48Q86UV5 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
USP48Q86UV5 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.51□□□□□ -1.53
USP48Q86UV5 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
USP48Q86UV5 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
USP48Q86UV5 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.51□□□□□ -1.53
USP48Q86UV5 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
USP48Q86UV5 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.51□□□□□ -1.53
USP48Q86UV5 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
USP48Q86UV5 MTCO1P24-201ENST00000515438 1558 ntBASIC5.5□□□□□ -1.53
USP48Q86UV5 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.5□□□□□ -1.53
USP48Q86UV5 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
USP48Q86UV5 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
USP48Q86UV5 MTCO1P9-201ENST00000505577 1534 ntBASIC5.5□□□□□ -1.53
USP48Q86UV5 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
USP48Q86UV5 SPRR2C-201ENST00000290702 219 ntBASIC5.5□□□□□ -1.53
USP48Q86UV5 RNA5SP366-201ENST00000365454 123 ntBASIC5.5□□□□□ -1.53
USP48Q86UV5 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
USP48Q86UV5 RNU6-74P-201ENST00000384235 107 ntBASIC5.5□□□□□ -1.53
USP48Q86UV5 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
USP48Q86UV5 AL022722.2-201ENST00000402519 180 ntBASIC5.5□□□□□ -1.53
USP48Q86UV5 RN7SKP202-201ENST00000410439 330 ntBASIC5.5□□□□□ -1.53
USP48Q86UV5 SNRPFP1-201ENST00000414761 252 ntBASIC5.5□□□□□ -1.53
USP48Q86UV5 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC5.5□□□□□ -1.53
USP48Q86UV5 AL391219.1-201ENST00000422570 483 ntBASIC5.5□□□□□ -1.53
USP48Q86UV5 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC5.5□□□□□ -1.53
USP48Q86UV5 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.5□□□□□ -1.53
USP48Q86UV5 HSFY6P-201ENST00000445573 403 ntBASIC5.5□□□□□ -1.53
USP48Q86UV5 RN7SL98P-201ENST00000462271 300 ntBASIC5.5□□□□□ -1.53
USP48Q86UV5 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
USP48Q86UV5 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC5.5□□□□□ -1.53
USP48Q86UV5 AC114786.4-201ENST00000508771 728 ntBASIC5.5□□□□□ -1.53
USP48Q86UV5 MTND3P22-201ENST00000510932 243 ntBASIC5.5□□□□□ -1.53
USP48Q86UV5 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.5□□□□□ -1.53
USP48Q86UV5 LRRC34P2-201ENST00000514850 553 ntBASIC5.5□□□□□ -1.53
USP48Q86UV5 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC5.5□□□□□ -1.53
USP48Q86UV5 PHBP17-201ENST00000528576 541 ntBASIC5.5□□□□□ -1.53
USP48Q86UV5 AL133271.1-201ENST00000538229 291 ntBASIC5.5□□□□□ -1.53
USP48Q86UV5 CR383656.7-201ENST00000548164 174 ntBASIC5.5□□□□□ -1.53
USP48Q86UV5 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC5.5□□□□□ -1.53
USP48Q86UV5 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC5.5□□□□□ -1.53
USP48Q86UV5 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC5.5□□□□□ -1.53
USP48Q86UV5 AC055876.1-202ENST00000567053 138 ntBASIC5.5□□□□□ -1.53
USP48Q86UV5 AC015912.2-201ENST00000571053 181 ntBASIC5.5□□□□□ -1.53
USP48Q86UV5 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.5□□□□□ -1.53
USP48Q86UV5 AL031176.1-201ENST00000604554 466 ntBASIC5.5□□□□□ -1.53
USP48Q86UV5 AC103710.2-201ENST00000609912 942 ntBASIC5.5□□□□□ -1.53
USP48Q86UV5 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC5.5□□□□□ -1.53
USP48Q86UV5 AC126177.8-201ENST00000618339 1015 ntBASIC5.5□□□□□ -1.53
USP48Q86UV5 AC244100.1-202ENST00000621554 382 ntBASIC5.5□□□□□ -1.53
USP48Q86UV5 AC010338.1-201ENST00000621823 717 ntBASIC5.5□□□□□ -1.53
USP48Q86UV5 AC024940.5-201ENST00000622889 474 ntBASIC5.5□□□□□ -1.53
USP48Q86UV5 AC138649.5-201ENST00000637456 137 ntBASIC5.5□□□□□ -1.53
USP48Q86UV5 MIR492-201ENST00000638676 116 ntBASIC5.5□□□□□ -1.53
USP48Q86UV5 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
USP48Q86UV5 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
USP48Q86UV5 AC006971.1-201ENST00000407916 4486 ntBASIC5.5□□□□□ -1.53
USP48Q86UV5 AC006026.1-201ENST00000444025 1803 ntBASIC5.5□□□□□ -1.53
USP48Q86UV5 USP44-208ENST00000552440 1818 ntTSL 5 BASIC5.5□□□□□ -1.53
USP48Q86UV5 LINC01109-201ENST00000603837 3081 ntBASIC5.5□□□□□ -1.53
USP48Q86UV5 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.5□□□□□ -1.53
USP48Q86UV5 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
USP48Q86UV5 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC5.5□□□□□ -1.53
USP48Q86UV5 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
USP48Q86UV5 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
USP48Q86UV5 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
USP48Q86UV5 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
USP48Q86UV5 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.49□□□□□ -1.53
USP48Q86UV5 AL136164.3-201ENST00000624429 3978 ntBASIC5.49□□□□□ -1.53
USP48Q86UV5 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
USP48Q86UV5 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
USP48Q86UV5 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
USP48Q86UV5 RNU1-20P-201ENST00000363314 162 ntBASIC5.49□□□□□ -1.53
USP48Q86UV5 RNU11-4P-201ENST00000391149 133 ntBASIC5.49□□□□□ -1.53
USP48Q86UV5 AL590762.2-201ENST00000395798 571 ntBASIC5.49□□□□□ -1.53
USP48Q86UV5 RNU6-628P-201ENST00000410675 107 ntBASIC5.49□□□□□ -1.53
USP48Q86UV5 OR9R1P-201ENST00000412200 877 ntBASIC5.49□□□□□ -1.53
USP48Q86UV5 OR1AA1P-201ENST00000419597 916 ntBASIC5.49□□□□□ -1.53
USP48Q86UV5 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC5.49□□□□□ -1.53
USP48Q86UV5 AL513185.2-201ENST00000425543 193 ntBASIC5.49□□□□□ -1.53
USP48Q86UV5 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC5.49□□□□□ -1.53
USP48Q86UV5 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC5.49□□□□□ -1.53
USP48Q86UV5 RPS20P5-201ENST00000434808 360 ntBASIC5.49□□□□□ -1.53
USP48Q86UV5 RPL23AP93-201ENST00000440847 484 ntBASIC5.49□□□□□ -1.53
USP48Q86UV5 DDX3P2-201ENST00000446138 111 ntBASIC5.49□□□□□ -1.53
USP48Q86UV5 AL590399.6-201ENST00000446396 307 ntBASIC5.49□□□□□ -1.53
USP48Q86UV5 AC005008.1-201ENST00000456151 612 ntBASIC5.49□□□□□ -1.53
USP48Q86UV5 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC5.49□□□□□ -1.53
USP48Q86UV5 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.49□□□□□ -1.53
USP48Q86UV5 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
USP48Q86UV5 MTCO2P30-201ENST00000503662 364 ntBASIC5.49□□□□□ -1.53
USP48Q86UV5 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC5.49□□□□□ -1.53
USP48Q86UV5 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC5.49□□□□□ -1.53
USP48Q86UV5 RNU6-1153P-201ENST00000516760 105 ntBASIC5.49□□□□□ -1.53
USP48Q86UV5 RNA5SP143-201ENST00000516936 115 ntBASIC5.49□□□□□ -1.53
USP48Q86UV5 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.49□□□□□ -1.53
USP48Q86UV5 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC5.49□□□□□ -1.53
USP48Q86UV5 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms