Protein–RNA interactions for Protein: Q7RTU4

BHLHA9, Class A basic helix-loop-helix protein 9, humanhuman

Predictions only

Length 235 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHA9Q7RTU4 AC010587.2-201ENST00000511727 448 ntBASIC3.98□□□□□ -1.77
BHLHA9Q7RTU4 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.98□□□□□ -1.77
BHLHA9Q7RTU4 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.98□□□□□ -1.77
BHLHA9Q7RTU4 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.98□□□□□ -1.77
BHLHA9Q7RTU4 AC022695.1-201ENST00000522089 237 ntBASIC3.98□□□□□ -1.77
BHLHA9Q7RTU4 ARL2BPP5-201ENST00000523141 481 ntBASIC3.98□□□□□ -1.77
BHLHA9Q7RTU4 AP003122.3-201ENST00000526316 255 ntBASIC3.98□□□□□ -1.77
BHLHA9Q7RTU4 MTCO3P15-201ENST00000526563 574 ntBASIC3.98□□□□□ -1.77
BHLHA9Q7RTU4 OR5AP1P-201ENST00000529730 940 ntBASIC3.98□□□□□ -1.77
BHLHA9Q7RTU4 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.98□□□□□ -1.77
BHLHA9Q7RTU4 AP000889.2-201ENST00000532684 490 ntBASIC3.98□□□□□ -1.77
BHLHA9Q7RTU4 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.98□□□□□ -1.77
BHLHA9Q7RTU4 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.98□□□□□ -1.77
BHLHA9Q7RTU4 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.98□□□□□ -1.77
BHLHA9Q7RTU4 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.98□□□□□ -1.77
BHLHA9Q7RTU4 AL512360.1-201ENST00000555346 234 ntBASIC3.98□□□□□ -1.77
BHLHA9Q7RTU4 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
BHLHA9Q7RTU4 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.98□□□□□ -1.77
BHLHA9Q7RTU4 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.98□□□□□ -1.77
BHLHA9Q7RTU4 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC3.98□□□□□ -1.77
BHLHA9Q7RTU4 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.98□□□□□ -1.77
BHLHA9Q7RTU4 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC3.98□□□□□ -1.77
BHLHA9Q7RTU4 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.98□□□□□ -1.77
BHLHA9Q7RTU4 AL020997.2-201ENST00000602607 184 ntBASIC3.98□□□□□ -1.77
BHLHA9Q7RTU4 AC091488.1-201ENST00000604239 660 ntBASIC3.98□□□□□ -1.77
BHLHA9Q7RTU4 AL137849.1-201ENST00000604767 169 ntBASIC3.98□□□□□ -1.77
BHLHA9Q7RTU4 RMST_3.1-201ENST00000611651 109 ntBASIC3.98□□□□□ -1.77
BHLHA9Q7RTU4 AL157817.1-201ENST00000614264 790 ntBASIC3.98□□□□□ -1.77
BHLHA9Q7RTU4 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.98□□□□□ -1.77
BHLHA9Q7RTU4 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.98□□□□□ -1.77
BHLHA9Q7RTU4 AC090617.10-201ENST00000624308 134 ntBASIC3.98□□□□□ -1.77
BHLHA9Q7RTU4 AC119674.1-212ENST00000641155 993 ntBASIC3.98□□□□□ -1.77
BHLHA9Q7RTU4 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
BHLHA9Q7RTU4 AC032011.1-201ENST00000611703 1549 ntBASIC3.98□□□□□ -1.77
BHLHA9Q7RTU4 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
BHLHA9Q7RTU4 LDHAL6CP-202ENST00000550738 3224 ntBASIC3.98□□□□□ -1.77
BHLHA9Q7RTU4 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.98□□□□□ -1.77
BHLHA9Q7RTU4 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
BHLHA9Q7RTU4 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
BHLHA9Q7RTU4 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
BHLHA9Q7RTU4 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
BHLHA9Q7RTU4 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
BHLHA9Q7RTU4 AC010300.1-201ENST00000600671 5134 ntBASIC3.98□□□□□ -1.77
BHLHA9Q7RTU4 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.97□□□□□ -1.77
BHLHA9Q7RTU4 DCAF13P1-201ENST00000495256 1330 ntBASIC3.97□□□□□ -1.77
BHLHA9Q7RTU4 AC068254.2-201ENST00000623938 3577 ntBASIC3.97□□□□□ -1.77
BHLHA9Q7RTU4 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
BHLHA9Q7RTU4 AC015813.6-201ENST00000624409 5808 ntBASIC3.97□□□□□ -1.77
BHLHA9Q7RTU4 RNU6-26P-201ENST00000383985 107 ntBASIC3.97□□□□□ -1.77
BHLHA9Q7RTU4 RNU6-532P-201ENST00000384318 107 ntBASIC3.97□□□□□ -1.77
BHLHA9Q7RTU4 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
BHLHA9Q7RTU4 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
BHLHA9Q7RTU4 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
BHLHA9Q7RTU4 RPL7P60-201ENST00000397636 735 ntBASIC3.97□□□□□ -1.77
BHLHA9Q7RTU4 AL354719.1-201ENST00000406535 843 ntBASIC3.97□□□□□ -1.77
BHLHA9Q7RTU4 PIGPP2-201ENST00000411569 458 ntBASIC3.97□□□□□ -1.77
BHLHA9Q7RTU4 RPL26P37-201ENST00000411983 438 ntBASIC3.97□□□□□ -1.77
BHLHA9Q7RTU4 JKAMPP1-201ENST00000413804 919 ntBASIC3.97□□□□□ -1.77
BHLHA9Q7RTU4 ZNF90P2-204ENST00000419323 1075 ntBASIC3.97□□□□□ -1.77
BHLHA9Q7RTU4 AL035410.1-201ENST00000427409 427 ntBASIC3.97□□□□□ -1.77
BHLHA9Q7RTU4 AC087650.1-201ENST00000431445 468 ntBASIC3.97□□□□□ -1.77
BHLHA9Q7RTU4 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.97□□□□□ -1.77
BHLHA9Q7RTU4 AL353597.2-202ENST00000434901 373 ntBASIC3.97□□□□□ -1.77
BHLHA9Q7RTU4 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC3.97□□□□□ -1.77
BHLHA9Q7RTU4 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.97□□□□□ -1.77
BHLHA9Q7RTU4 AC073587.1-201ENST00000447093 876 ntBASIC3.97□□□□□ -1.77
BHLHA9Q7RTU4 CACYBPP2-201ENST00000453625 678 ntBASIC3.97□□□□□ -1.77
BHLHA9Q7RTU4 RN7SL132P-201ENST00000478131 296 ntBASIC3.97□□□□□ -1.77
BHLHA9Q7RTU4 AL135752.1-201ENST00000479477 471 ntBASIC3.97□□□□□ -1.77
BHLHA9Q7RTU4 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC3.97□□□□□ -1.77
BHLHA9Q7RTU4 CDH12P2-201ENST00000504393 298 ntBASIC3.97□□□□□ -1.77
BHLHA9Q7RTU4 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.97□□□□□ -1.77
BHLHA9Q7RTU4 SAP18P1-201ENST00000512058 390 ntBASIC3.97□□□□□ -1.77
BHLHA9Q7RTU4 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.97□□□□□ -1.77
BHLHA9Q7RTU4 RNU6-388P-201ENST00000517012 105 ntBASIC3.97□□□□□ -1.77
BHLHA9Q7RTU4 RNU6-389P-201ENST00000517048 105 ntBASIC3.97□□□□□ -1.77
BHLHA9Q7RTU4 RNU6-430P-201ENST00000517078 107 ntBASIC3.97□□□□□ -1.77
BHLHA9Q7RTU4 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.97□□□□□ -1.77
BHLHA9Q7RTU4 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.97□□□□□ -1.77
BHLHA9Q7RTU4 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC3.97□□□□□ -1.77
BHLHA9Q7RTU4 XIAPP1-201ENST00000603162 600 ntBASIC3.97□□□□□ -1.77
BHLHA9Q7RTU4 AL008729.2-201ENST00000606393 473 ntBASIC3.97□□□□□ -1.77
BHLHA9Q7RTU4 AC022893.3-201ENST00000607665 437 ntBASIC3.97□□□□□ -1.77
BHLHA9Q7RTU4 U4.1-201ENST00000620349 87 ntBASIC3.97□□□□□ -1.77
BHLHA9Q7RTU4 AC018816.2-201ENST00000621460 353 ntBASIC3.97□□□□□ -1.77
BHLHA9Q7RTU4 AC091925.1-201ENST00000623204 462 ntBASIC3.97□□□□□ -1.77
BHLHA9Q7RTU4 AC040168.1-201ENST00000623594 991 ntBASIC3.97□□□□□ -1.77
BHLHA9Q7RTU4 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
BHLHA9Q7RTU4 AC138915.3-201ENST00000562908 1389 ntBASIC3.97□□□□□ -1.77
BHLHA9Q7RTU4 AC024560.2-201ENST00000507981 1497 ntBASIC3.97□□□□□ -1.77
BHLHA9Q7RTU4 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
BHLHA9Q7RTU4 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.97□□□□□ -1.77
BHLHA9Q7RTU4 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
BHLHA9Q7RTU4 AL359854.1-201ENST00000614203 1594 ntBASIC3.97□□□□□ -1.77
BHLHA9Q7RTU4 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
BHLHA9Q7RTU4 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
BHLHA9Q7RTU4 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
BHLHA9Q7RTU4 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
BHLHA9Q7RTU4 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
BHLHA9Q7RTU4 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms