Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 OLMALINC-203ENST00000641087 3779 ntBASIC5.32□□□□□ -1.56
RNFT1Q5M7Z0 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
RNFT1Q5M7Z0 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNFT1Q5M7Z0 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.32□□□□□ -1.56
RNFT1Q5M7Z0 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RNFT1Q5M7Z0 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.32□□□□□ -1.56
RNFT1Q5M7Z0 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.32□□□□□ -1.56
RNFT1Q5M7Z0 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNFT1Q5M7Z0 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNFT1Q5M7Z0 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.32□□□□□ -1.56
RNFT1Q5M7Z0 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RNFT1Q5M7Z0 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.31□□□□□ -1.56
RNFT1Q5M7Z0 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
RNFT1Q5M7Z0 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RNFT1Q5M7Z0 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
RNFT1Q5M7Z0 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RNFT1Q5M7Z0 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RNFT1Q5M7Z0 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.31□□□□□ -1.56
RNFT1Q5M7Z0 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
RNFT1Q5M7Z0 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RNFT1Q5M7Z0 RNA5SP46-201ENST00000362370 120 ntBASIC5.31□□□□□ -1.56
RNFT1Q5M7Z0 Y_RNA.275-201ENST00000364726 110 ntBASIC5.31□□□□□ -1.56
RNFT1Q5M7Z0 RNU6-937P-201ENST00000384325 106 ntBASIC5.31□□□□□ -1.56
RNFT1Q5M7Z0 RNU6-754P-201ENST00000391166 107 ntBASIC5.31□□□□□ -1.56
RNFT1Q5M7Z0 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RNFT1Q5M7Z0 RPS15AP6-201ENST00000420703 385 ntBASIC5.31□□□□□ -1.56
RNFT1Q5M7Z0 BX510359.3-201ENST00000422168 306 ntBASIC5.31□□□□□ -1.56
RNFT1Q5M7Z0 AC007568.1-201ENST00000422912 471 ntBASIC5.31□□□□□ -1.56
RNFT1Q5M7Z0 HSPD1P21-201ENST00000436541 245 ntBASIC5.31□□□□□ -1.56
RNFT1Q5M7Z0 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.31□□□□□ -1.56
RNFT1Q5M7Z0 EEF1B2P6-201ENST00000445713 673 ntBASIC5.31□□□□□ -1.56
RNFT1Q5M7Z0 REG1CP-206ENST00000447469 496 ntBASIC5.31□□□□□ -1.56
RNFT1Q5M7Z0 AL133244.1-201ENST00000456007 258 ntBASIC5.31□□□□□ -1.56
RNFT1Q5M7Z0 RPS17P15-201ENST00000475609 349 ntBASIC5.31□□□□□ -1.56
RNFT1Q5M7Z0 HMGB1P21-201ENST00000502313 581 ntBASIC5.31□□□□□ -1.56
RNFT1Q5M7Z0 CYCTP-201ENST00000504253 315 ntBASIC5.31□□□□□ -1.56
RNFT1Q5M7Z0 ATP5LP3-201ENST00000514223 304 ntBASIC5.31□□□□□ -1.56
RNFT1Q5M7Z0 AC104057.1-201ENST00000515547 497 ntBASIC5.31□□□□□ -1.56
RNFT1Q5M7Z0 RNU4-57P-201ENST00000515980 135 ntBASIC5.31□□□□□ -1.56
RNFT1Q5M7Z0 RNU6-1333P-201ENST00000516162 93 ntBASIC5.31□□□□□ -1.56
RNFT1Q5M7Z0 MIR2355-201ENST00000517199 87 ntBASIC5.31□□□□□ -1.56
RNFT1Q5M7Z0 SNORA43.3-201ENST00000517240 103 ntBASIC5.31□□□□□ -1.56
RNFT1Q5M7Z0 AC025755.1-201ENST00000521306 278 ntBASIC5.31□□□□□ -1.56
RNFT1Q5M7Z0 DEFB108D-201ENST00000527787 222 ntBASIC5.31□□□□□ -1.56
RNFT1Q5M7Z0 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC5.31□□□□□ -1.56
RNFT1Q5M7Z0 H3F3AP1-201ENST00000559984 334 ntBASIC5.31□□□□□ -1.56
RNFT1Q5M7Z0 AC120057.2-201ENST00000571520 271 ntBASIC5.31□□□□□ -1.56
RNFT1Q5M7Z0 MIR4505-201ENST00000582238 73 ntBASIC5.31□□□□□ -1.56
RNFT1Q5M7Z0 FO393422.1-201ENST00000603908 708 ntBASIC5.31□□□□□ -1.56
RNFT1Q5M7Z0 AL589674.2-201ENST00000604304 337 ntBASIC5.31□□□□□ -1.56
RNFT1Q5M7Z0 AL670379.2-201ENST00000604983 252 ntBASIC5.31□□□□□ -1.56
RNFT1Q5M7Z0 AC037487.3-201ENST00000606668 112 ntBASIC5.31□□□□□ -1.56
RNFT1Q5M7Z0 AL139099.4-201ENST00000614802 114 ntBASIC5.31□□□□□ -1.56
RNFT1Q5M7Z0 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.31□□□□□ -1.56
RNFT1Q5M7Z0 Z99571.1-201ENST00000636677 394 ntBASIC5.31□□□□□ -1.56
RNFT1Q5M7Z0 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
RNFT1Q5M7Z0 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
RNFT1Q5M7Z0 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
RNFT1Q5M7Z0 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
RNFT1Q5M7Z0 AC015799.1-201ENST00000622996 3122 ntBASIC5.31□□□□□ -1.56
RNFT1Q5M7Z0 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
RNFT1Q5M7Z0 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.31□□□□□ -1.56
RNFT1Q5M7Z0 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.31□□□□□ -1.56
RNFT1Q5M7Z0 AC079753.1-201ENST00000623243 3868 ntBASIC5.31□□□□□ -1.56
RNFT1Q5M7Z0 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RNFT1Q5M7Z0 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RNFT1Q5M7Z0 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.3□□□□□ -1.56
RNFT1Q5M7Z0 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
RNFT1Q5M7Z0 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RNFT1Q5M7Z0 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
RNFT1Q5M7Z0 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
RNFT1Q5M7Z0 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC5.3□□□□□ -1.56
RNFT1Q5M7Z0 SNORD116-14-201ENST00000383894 92 ntBASIC5.3□□□□□ -1.56
RNFT1Q5M7Z0 SNORD116-17-201ENST00000383929 92 ntBASIC5.3□□□□□ -1.56
RNFT1Q5M7Z0 SNORD63-201ENST00000384262 68 ntBASIC5.3□□□□□ -1.56
RNFT1Q5M7Z0 SNORD116-15-201ENST00000384445 92 ntBASIC5.3□□□□□ -1.56
RNFT1Q5M7Z0 SNORD116-20-201ENST00000384529 92 ntBASIC5.3□□□□□ -1.56
RNFT1Q5M7Z0 SNORD116-19-201ENST00000384729 92 ntBASIC5.3□□□□□ -1.56
RNFT1Q5M7Z0 AL391361.1-201ENST00000405580 489 ntBASIC5.3□□□□□ -1.56
RNFT1Q5M7Z0 RNA5SP494-201ENST00000410653 129 ntBASIC5.3□□□□□ -1.56
RNFT1Q5M7Z0 RNU6-651P-201ENST00000411040 105 ntBASIC5.3□□□□□ -1.56
RNFT1Q5M7Z0 DPPA2P3-201ENST00000411853 655 ntBASIC5.3□□□□□ -1.56
RNFT1Q5M7Z0 MYL6P5-201ENST00000412707 459 ntBASIC5.3□□□□□ -1.56
RNFT1Q5M7Z0 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.3□□□□□ -1.56
RNFT1Q5M7Z0 TOMM20P4-201ENST00000427861 435 ntBASIC5.3□□□□□ -1.56
RNFT1Q5M7Z0 RPL23AP33-201ENST00000442301 452 ntBASIC5.3□□□□□ -1.56
RNFT1Q5M7Z0 NOP56P2-201ENST00000447491 769 ntBASIC5.3□□□□□ -1.56
RNFT1Q5M7Z0 AC133134.1-201ENST00000466800 359 ntBASIC5.3□□□□□ -1.56
RNFT1Q5M7Z0 HMGB1P25-201ENST00000468402 607 ntBASIC5.3□□□□□ -1.56
RNFT1Q5M7Z0 AC006511.1-201ENST00000470614 315 ntBASIC5.3□□□□□ -1.56
RNFT1Q5M7Z0 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.3□□□□□ -1.56
RNFT1Q5M7Z0 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.3□□□□□ -1.56
RNFT1Q5M7Z0 AC008945.1-201ENST00000505144 499 ntBASIC5.3□□□□□ -1.56
RNFT1Q5M7Z0 COX7A2P2-201ENST00000505291 250 ntBASIC5.3□□□□□ -1.56
RNFT1Q5M7Z0 AC018442.3-201ENST00000523025 183 ntBASIC5.3□□□□□ -1.56
RNFT1Q5M7Z0 MDM2-232ENST00000544561 213 ntTSL 5 BASIC5.3□□□□□ -1.56
RNFT1Q5M7Z0 TRAV32-201ENST00000553993 340 ntBASIC5.3□□□□□ -1.56
RNFT1Q5M7Z0 MEG8-215ENST00000555354 469 ntTSL 3 BASIC5.3□□□□□ -1.56
RNFT1Q5M7Z0 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.3□□□□□ -1.56
RNFT1Q5M7Z0 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms