Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
PCDH1Q08174 RNA5SP319-201ENST00000362768 119 ntBASIC5.15□□□□□ -1.59
PCDH1Q08174 SNORA51.1-201ENST00000363243 140 ntBASIC5.15□□□□□ -1.59
PCDH1Q08174 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.15□□□□□ -1.59
PCDH1Q08174 RNU6-190P-201ENST00000384154 102 ntBASIC5.15□□□□□ -1.59
PCDH1Q08174 Y_RNA.493-201ENST00000384422 102 ntBASIC5.15□□□□□ -1.59
PCDH1Q08174 RNU6-306P-201ENST00000384617 107 ntBASIC5.15□□□□□ -1.59
PCDH1Q08174 AL139039.1-201ENST00000401900 692 ntBASIC5.15□□□□□ -1.59
PCDH1Q08174 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.15□□□□□ -1.59
PCDH1Q08174 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.15□□□□□ -1.59
PCDH1Q08174 CYCSP10-201ENST00000417973 294 ntBASIC5.15□□□□□ -1.59
PCDH1Q08174 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC5.15□□□□□ -1.59
PCDH1Q08174 AL391219.1-201ENST00000422570 483 ntBASIC5.15□□□□□ -1.59
PCDH1Q08174 AL359672.1-201ENST00000442302 409 ntBASIC5.15□□□□□ -1.59
PCDH1Q08174 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.15□□□□□ -1.59
PCDH1Q08174 AC090686.1-201ENST00000481577 749 ntBASIC5.15□□□□□ -1.59
PCDH1Q08174 RN7SL814P-201ENST00000487715 300 ntBASIC5.15□□□□□ -1.59
PCDH1Q08174 AF213884.1-201ENST00000488102 463 ntBASIC5.15□□□□□ -1.59
PCDH1Q08174 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC5.15□□□□□ -1.59
PCDH1Q08174 AC026801.2-201ENST00000515352 425 ntBASIC5.15□□□□□ -1.59
PCDH1Q08174 RNU6-120P-201ENST00000516077 103 ntBASIC5.15□□□□□ -1.59
PCDH1Q08174 RNA5SP384-201ENST00000516615 116 ntBASIC5.15□□□□□ -1.59
PCDH1Q08174 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC5.15□□□□□ -1.59
PCDH1Q08174 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.15□□□□□ -1.59
PCDH1Q08174 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC5.15□□□□□ -1.59
PCDH1Q08174 AC011494.1-201ENST00000596454 237 ntBASIC5.15□□□□□ -1.59
PCDH1Q08174 AL589674.2-201ENST00000604304 337 ntBASIC5.15□□□□□ -1.59
PCDH1Q08174 AL034351.1-201ENST00000605288 668 ntBASIC5.15□□□□□ -1.59
PCDH1Q08174 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC5.15□□□□□ -1.59
PCDH1Q08174 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC5.15□□□□□ -1.59
PCDH1Q08174 MPP6-209ENST00000625307 126 ntTSL 5 BASIC5.15□□□□□ -1.59
PCDH1Q08174 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PCDH1Q08174 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
PCDH1Q08174 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.15□□□□□ -1.59
PCDH1Q08174 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.15□□□□□ -1.59
PCDH1Q08174 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PCDH1Q08174 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PCDH1Q08174 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.15□□□□□ -1.59
PCDH1Q08174 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PCDH1Q08174 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PCDH1Q08174 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.14□□□□□ -1.59
PCDH1Q08174 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PCDH1Q08174 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PCDH1Q08174 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
PCDH1Q08174 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
PCDH1Q08174 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.14□□□□□ -1.59
PCDH1Q08174 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PCDH1Q08174 RNA5SP183-201ENST00000362452 119 ntBASIC5.14□□□□□ -1.59
PCDH1Q08174 RNU6-379P-201ENST00000363813 104 ntBASIC5.14□□□□□ -1.59
PCDH1Q08174 DEFB109C-201ENST00000382575 264 ntBASIC5.14□□□□□ -1.59
PCDH1Q08174 DEFB109B-201ENST00000382656 264 ntBASIC5.14□□□□□ -1.59
PCDH1Q08174 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.14□□□□□ -1.59
PCDH1Q08174 AC016769.2-201ENST00000414815 475 ntBASIC5.14□□□□□ -1.59
PCDH1Q08174 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.14□□□□□ -1.59
PCDH1Q08174 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC5.14□□□□□ -1.59
PCDH1Q08174 CHEK2P5-201ENST00000423877 246 ntBASIC5.14□□□□□ -1.59
PCDH1Q08174 LAMTOR3P1-201ENST00000428620 370 ntBASIC5.14□□□□□ -1.59
PCDH1Q08174 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.14□□□□□ -1.59
PCDH1Q08174 USP9YP30-201ENST00000430729 455 ntBASIC5.14□□□□□ -1.59
PCDH1Q08174 CYCSP43-201ENST00000438233 310 ntBASIC5.14□□□□□ -1.59
PCDH1Q08174 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC5.14□□□□□ -1.59
PCDH1Q08174 RPS3AP41-201ENST00000462701 778 ntBASIC5.14□□□□□ -1.59
PCDH1Q08174 COX6B1P2-201ENST00000489624 230 ntBASIC5.14□□□□□ -1.59
PCDH1Q08174 CEACAMP10-202ENST00000495431 496 ntBASIC5.14□□□□□ -1.59
PCDH1Q08174 PGAM1P13-201ENST00000507497 754 ntBASIC5.14□□□□□ -1.59
PCDH1Q08174 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.14□□□□□ -1.59
PCDH1Q08174 Y_RNA.668-201ENST00000516233 93 ntBASIC5.14□□□□□ -1.59
PCDH1Q08174 Y_RNA.689-201ENST00000516589 107 ntBASIC5.14□□□□□ -1.59
PCDH1Q08174 RNU6-307P-201ENST00000516743 106 ntBASIC5.14□□□□□ -1.59
PCDH1Q08174 RN7SKP82-201ENST00000516786 223 ntBASIC5.14□□□□□ -1.59
PCDH1Q08174 RNA5SP373-201ENST00000517271 95 ntBASIC5.14□□□□□ -1.59
PCDH1Q08174 AP005902.1-201ENST00000521358 186 ntBASIC5.14□□□□□ -1.59
PCDH1Q08174 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC5.14□□□□□ -1.59
PCDH1Q08174 SNORD95-201ENST00000579879 68 ntBASIC5.14□□□□□ -1.59
PCDH1Q08174 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
PCDH1Q08174 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.14□□□□□ -1.59
PCDH1Q08174 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.14□□□□□ -1.59
PCDH1Q08174 AL161423.1-201ENST00000613700 262 ntBASIC5.14□□□□□ -1.59
PCDH1Q08174 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC5.14□□□□□ -1.59
PCDH1Q08174 MIR6130-201ENST00000619419 109 ntBASIC5.14□□□□□ -1.59
PCDH1Q08174 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
PCDH1Q08174 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
PCDH1Q08174 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PCDH1Q08174 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PCDH1Q08174 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PCDH1Q08174 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
PCDH1Q08174 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.14□□□□□ -1.59
PCDH1Q08174 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
PCDH1Q08174 PABPC1P7-201ENST00000413177 1513 ntBASIC5.13□□□□□ -1.59
PCDH1Q08174 SAMMSON-213ENST00000641336 1521 ntBASIC5.13□□□□□ -1.59
PCDH1Q08174 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
PCDH1Q08174 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
PCDH1Q08174 HSPA8P4-201ENST00000511877 1920 ntBASIC5.13□□□□□ -1.59
PCDH1Q08174 SOCS5P3-201ENST00000425115 1576 ntBASIC5.13□□□□□ -1.59
PCDH1Q08174 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.13□□□□□ -1.59
PCDH1Q08174 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PCDH1Q08174 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.13□□□□□ -1.59
PCDH1Q08174 Y_RNA.2-201ENST00000362330 96 ntBASIC5.13□□□□□ -1.59
PCDH1Q08174 RNA5SP242-201ENST00000364171 118 ntBASIC5.13□□□□□ -1.59
PCDH1Q08174 RNU6-214P-201ENST00000384130 107 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms