Protein–RNA interactions for Protein: P20585

MSH3, DNA mismatch repair protein Msh3, humanhuman

Predictions only

Length 1,137 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3P20585 RN7SKP60-201ENST00000516985 239 ntBASIC3.53□□□□□ -1.84
MSH3P20585 AL139174.1-201ENST00000531489 886 ntBASIC3.53□□□□□ -1.84
MSH3P20585 AC068587.4-201ENST00000533893 186 ntBASIC3.53□□□□□ -1.84
MSH3P20585 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.53□□□□□ -1.84
MSH3P20585 AC091489.2-201ENST00000566263 604 ntBASIC3.53□□□□□ -1.84
MSH3P20585 MIR3186-201ENST00000577404 85 ntBASIC3.53□□□□□ -1.84
MSH3P20585 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC3.53□□□□□ -1.84
MSH3P20585 MIR4425-201ENST00000580572 84 ntBASIC3.53□□□□□ -1.84
MSH3P20585 MIR3158-1-201ENST00000583596 81 ntBASIC3.53□□□□□ -1.84
MSH3P20585 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.53□□□□□ -1.84
MSH3P20585 AC146944.4-201ENST00000602697 718 ntBASIC3.53□□□□□ -1.84
MSH3P20585 AC090186.1-201ENST00000605991 572 ntBASIC3.53□□□□□ -1.84
MSH3P20585 AC239868.4-201ENST00000608318 671 ntBASIC3.53□□□□□ -1.84
MSH3P20585 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.53□□□□□ -1.84
MSH3P20585 MIR7851-201ENST00000610611 160 ntBASIC3.53□□□□□ -1.84
MSH3P20585 HULC.1-201ENST00000612720 240 ntBASIC3.53□□□□□ -1.84
MSH3P20585 AC025594.3-201ENST00000613068 790 ntBASIC3.53□□□□□ -1.84
MSH3P20585 AC090116.1-201ENST00000615679 446 ntBASIC3.53□□□□□ -1.84
MSH3P20585 AC009878.1-201ENST00000621819 340 ntBASIC3.53□□□□□ -1.84
MSH3P20585 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.53□□□□□ -1.84
MSH3P20585 AC090582.1-201ENST00000636321 199 ntBASIC3.53□□□□□ -1.84
MSH3P20585 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.53□□□□□ -1.84
MSH3P20585 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
MSH3P20585 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
MSH3P20585 AC058791.1-201ENST00000608412 3198 ntBASIC3.53□□□□□ -1.85
MSH3P20585 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
MSH3P20585 AL353746.1-201ENST00000566293 6881 ntBASIC3.52□□□□□ -1.85
MSH3P20585 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
MSH3P20585 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
MSH3P20585 RNU6-878P-201ENST00000384578 110 ntBASIC3.52□□□□□ -1.85
MSH3P20585 MIR184-201ENST00000384962 84 ntBASIC3.52□□□□□ -1.85
MSH3P20585 MTND4LP20-201ENST00000402379 270 ntBASIC3.52□□□□□ -1.85
MSH3P20585 U3.39-201ENST00000408569 239 ntBASIC3.52□□□□□ -1.85
MSH3P20585 RN7SKP266-201ENST00000410232 287 ntBASIC3.52□□□□□ -1.85
MSH3P20585 RNU2-37P-201ENST00000410695 177 ntBASIC3.52□□□□□ -1.85
MSH3P20585 RN7SKP142-201ENST00000411236 328 ntBASIC3.52□□□□□ -1.85
MSH3P20585 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.52□□□□□ -1.85
MSH3P20585 SYF2P2-201ENST00000417620 583 ntBASIC3.52□□□□□ -1.85
MSH3P20585 MTCO2P5-201ENST00000422621 426 ntBASIC3.52□□□□□ -1.85
MSH3P20585 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.52□□□□□ -1.85
MSH3P20585 AL589823.1-201ENST00000429577 183 ntBASIC3.52□□□□□ -1.85
MSH3P20585 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.52□□□□□ -1.85
MSH3P20585 MTCO1P19-201ENST00000443487 500 ntBASIC3.52□□□□□ -1.85
MSH3P20585 BX322784.1-201ENST00000455793 1077 ntBASIC3.52□□□□□ -1.85
MSH3P20585 RPL23AP14-201ENST00000468281 468 ntBASIC3.52□□□□□ -1.85
MSH3P20585 OR5H5P-201ENST00000503164 928 ntBASIC3.52□□□□□ -1.85
MSH3P20585 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.52□□□□□ -1.85
MSH3P20585 AC021678.1-201ENST00000505195 936 ntBASIC3.52□□□□□ -1.85
MSH3P20585 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.52□□□□□ -1.85
MSH3P20585 MTCO3P7-201ENST00000510008 774 ntBASIC3.52□□□□□ -1.85
MSH3P20585 AC024589.1-201ENST00000512207 263 ntBASIC3.52□□□□□ -1.85
MSH3P20585 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
MSH3P20585 MTND3P5-201ENST00000512798 333 ntBASIC3.52□□□□□ -1.85
MSH3P20585 RNU2-58P-201ENST00000516403 183 ntBASIC3.52□□□□□ -1.85
MSH3P20585 SNORA70.18-201ENST00000516696 98 ntBASIC3.52□□□□□ -1.85
MSH3P20585 IGKV2D-36-201ENST00000518643 226 ntBASIC3.52□□□□□ -1.85
MSH3P20585 AC026403.1-201ENST00000518938 295 ntBASIC3.52□□□□□ -1.85
MSH3P20585 AP004247.1-201ENST00000531556 1289 ntBASIC3.52□□□□□ -1.85
MSH3P20585 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
MSH3P20585 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.52□□□□□ -1.85
MSH3P20585 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.52□□□□□ -1.85
MSH3P20585 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.52□□□□□ -1.85
MSH3P20585 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.52□□□□□ -1.85
MSH3P20585 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
MSH3P20585 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC3.52□□□□□ -1.85
MSH3P20585 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.52□□□□□ -1.85
MSH3P20585 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.52□□□□□ -1.85
MSH3P20585 AC022146.1-201ENST00000595307 847 ntBASIC3.52□□□□□ -1.85
MSH3P20585 AC012065.4-201ENST00000602445 679 ntBASIC3.52□□□□□ -1.85
MSH3P20585 AC112187.2-201ENST00000604345 283 ntBASIC3.52□□□□□ -1.85
MSH3P20585 AC245389.1-201ENST00000605141 529 ntBASIC3.52□□□□□ -1.85
MSH3P20585 AC128687.1-201ENST00000605304 619 ntBASIC3.52□□□□□ -1.85
MSH3P20585 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.52□□□□□ -1.85
MSH3P20585 AC103710.4-201ENST00000609301 899 ntBASIC3.52□□□□□ -1.85
MSH3P20585 AC122108.2-201ENST00000611946 526 ntBASIC3.52□□□□□ -1.85
MSH3P20585 AC006133.1-201ENST00000617106 264 ntBASIC3.52□□□□□ -1.85
MSH3P20585 AC092628.2-201ENST00000622492 339 ntBASIC3.52□□□□□ -1.85
MSH3P20585 AC004009.2-201ENST00000623016 728 ntBASIC3.52□□□□□ -1.85
MSH3P20585 AC025048.6-202ENST00000627667 438 ntBASIC3.52□□□□□ -1.85
MSH3P20585 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.52□□□□□ -1.85
MSH3P20585 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.52□□□□□ -1.85
MSH3P20585 RIOK3P1-201ENST00000418778 1528 ntBASIC3.52□□□□□ -1.85
MSH3P20585 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.52□□□□□ -1.85
MSH3P20585 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
MSH3P20585 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
MSH3P20585 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
MSH3P20585 AC092104.1-201ENST00000497346 1441 ntBASIC3.52□□□□□ -1.85
MSH3P20585 AP001148.1-201ENST00000624124 2359 ntBASIC3.52□□□□□ -1.85
MSH3P20585 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
MSH3P20585 GABPAP-201ENST00000419271 1356 ntBASIC3.51□□□□□ -1.85
MSH3P20585 MTND4P4-201ENST00000439033 1366 ntBASIC3.51□□□□□ -1.85
MSH3P20585 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.51□□□□□ -1.85
MSH3P20585 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.51□□□□□ -1.85
MSH3P20585 ZNF734P-201ENST00000419494 1534 ntBASIC3.51□□□□□ -1.85
MSH3P20585 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.51□□□□□ -1.85
MSH3P20585 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
MSH3P20585 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
MSH3P20585 Y_RNA.97-201ENST00000363094 102 ntBASIC3.51□□□□□ -1.85
MSH3P20585 RNA5SP235-201ENST00000365411 114 ntBASIC3.51□□□□□ -1.85
MSH3P20585 MIR1250-201ENST00000408098 113 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms