Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 AC055876.5-201ENST00000605667 259 ntBASIC3.74□□□□□ -1.81
MMP2P08253 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
MMP2P08253 AL590099.1-201ENST00000615276 138 ntBASIC3.74□□□□□ -1.81
MMP2P08253 AL359715.5-201ENST00000623431 443 ntBASIC3.74□□□□□ -1.81
MMP2P08253 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.74□□□□□ -1.81
MMP2P08253 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.74□□□□□ -1.81
MMP2P08253 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
MMP2P08253 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
MMP2P08253 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
MMP2P08253 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
MMP2P08253 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.73□□□□□ -1.81
MMP2P08253 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
MMP2P08253 AC092125.1-201ENST00000562568 1995 ntBASIC3.73□□□□□ -1.81
MMP2P08253 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
MMP2P08253 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
MMP2P08253 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
MMP2P08253 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
MMP2P08253 RNU6-600P-201ENST00000362524 99 ntBASIC3.73□□□□□ -1.81
MMP2P08253 Y_RNA.126-201ENST00000363382 111 ntBASIC3.73□□□□□ -1.81
MMP2P08253 SNORD6-201ENST00000365444 73 ntBASIC3.73□□□□□ -1.81
MMP2P08253 Y_RNA.359-201ENST00000365498 102 ntBASIC3.73□□□□□ -1.81
MMP2P08253 RNU6-1181P-201ENST00000384191 106 ntBASIC3.73□□□□□ -1.81
MMP2P08253 Y_RNA.559-201ENST00000384686 107 ntBASIC3.73□□□□□ -1.81
MMP2P08253 SNORD116-4-201ENST00000384733 96 ntBASIC3.73□□□□□ -1.81
MMP2P08253 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
MMP2P08253 CYCSP19-201ENST00000411715 316 ntBASIC3.73□□□□□ -1.81
MMP2P08253 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC3.73□□□□□ -1.81
MMP2P08253 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.73□□□□□ -1.81
MMP2P08253 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.73□□□□□ -1.81
MMP2P08253 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.73□□□□□ -1.81
MMP2P08253 AL445584.1-201ENST00000431451 330 ntBASIC3.73□□□□□ -1.81
MMP2P08253 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.73□□□□□ -1.81
MMP2P08253 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.73□□□□□ -1.81
MMP2P08253 NOTCH2P1-201ENST00000443481 624 ntBASIC3.73□□□□□ -1.81
MMP2P08253 AL592447.1-201ENST00000447592 540 ntBASIC3.73□□□□□ -1.81
MMP2P08253 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.73□□□□□ -1.81
MMP2P08253 RPS24P6-201ENST00000452670 400 ntBASIC3.73□□□□□ -1.81
MMP2P08253 SSXP1-201ENST00000453640 473 ntBASIC3.73□□□□□ -1.81
MMP2P08253 Z82190.1-201ENST00000454534 490 ntBASIC3.73□□□□□ -1.81
MMP2P08253 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.73□□□□□ -1.81
MMP2P08253 RPL21P104-201ENST00000464143 478 ntBASIC3.73□□□□□ -1.81
MMP2P08253 AC068305.1-201ENST00000497406 726 ntBASIC3.73□□□□□ -1.81
MMP2P08253 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.73□□□□□ -1.81
MMP2P08253 UBE2CP3-201ENST00000502715 450 ntBASIC3.73□□□□□ -1.81
MMP2P08253 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
MMP2P08253 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.73□□□□□ -1.81
MMP2P08253 AC109635.4-202ENST00000531666 412 ntBASIC3.73□□□□□ -1.81
MMP2P08253 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.73□□□□□ -1.81
MMP2P08253 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.73□□□□□ -1.81
MMP2P08253 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.73□□□□□ -1.81
MMP2P08253 AC107016.1-201ENST00000550463 337 ntBASIC3.73□□□□□ -1.81
MMP2P08253 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.73□□□□□ -1.81
MMP2P08253 SETP7-201ENST00000552169 453 ntBASIC3.73□□□□□ -1.81
MMP2P08253 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.73□□□□□ -1.81
MMP2P08253 AL139286.2-201ENST00000606838 396 ntBASIC3.73□□□□□ -1.81
MMP2P08253 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
MMP2P08253 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.73□□□□□ -1.81
MMP2P08253 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
MMP2P08253 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
MMP2P08253 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
MMP2P08253 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
MMP2P08253 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
MMP2P08253 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.72□□□□□ -1.81
MMP2P08253 RNY4P24-201ENST00000362735 96 ntBASIC3.72□□□□□ -1.81
MMP2P08253 RNA5SP124-201ENST00000362739 110 ntBASIC3.72□□□□□ -1.81
MMP2P08253 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.72□□□□□ -1.81
MMP2P08253 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
MMP2P08253 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
MMP2P08253 OR5H15-201ENST00000383696 930 ntBASIC3.72□□□□□ -1.81
MMP2P08253 RNU6-629P-201ENST00000384061 103 ntBASIC3.72□□□□□ -1.81
MMP2P08253 SNORD3H-201ENST00000384486 214 ntBASIC3.72□□□□□ -1.81
MMP2P08253 Y_RNA.548-201ENST00000384656 105 ntBASIC3.72□□□□□ -1.81
MMP2P08253 RN7SKP159-201ENST00000410657 292 ntBASIC3.72□□□□□ -1.81
MMP2P08253 SNORA57.3-201ENST00000411095 141 ntBASIC3.72□□□□□ -1.81
MMP2P08253 HMGB3P20-201ENST00000417997 600 ntBASIC3.72□□□□□ -1.81
MMP2P08253 TOMM22P1-201ENST00000418578 312 ntBASIC3.72□□□□□ -1.81
MMP2P08253 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
MMP2P08253 MTCO3P5-201ENST00000433620 714 ntBASIC3.72□□□□□ -1.81
MMP2P08253 VDAC1P3-201ENST00000434069 851 ntBASIC3.72□□□□□ -1.81
MMP2P08253 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.72□□□□□ -1.81
MMP2P08253 HMGB1P12-201ENST00000438594 598 ntBASIC3.72□□□□□ -1.81
MMP2P08253 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.72□□□□□ -1.81
MMP2P08253 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.72□□□□□ -1.81
MMP2P08253 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.72□□□□□ -1.81
MMP2P08253 PDSS1P2-201ENST00000449397 678 ntBASIC3.72□□□□□ -1.81
MMP2P08253 ANP32BP2-201ENST00000454525 545 ntBASIC3.72□□□□□ -1.81
MMP2P08253 CFTRP1-201ENST00000456646 183 ntBASIC3.72□□□□□ -1.81
MMP2P08253 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.72□□□□□ -1.81
MMP2P08253 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.72□□□□□ -1.81
MMP2P08253 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.72□□□□□ -1.81
MMP2P08253 AC021382.1-201ENST00000483523 359 ntBASIC3.72□□□□□ -1.81
MMP2P08253 AC112204.1-201ENST00000502591 103 ntBASIC3.72□□□□□ -1.81
MMP2P08253 AC079140.3-201ENST00000511111 550 ntBASIC3.72□□□□□ -1.81
MMP2P08253 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.72□□□□□ -1.81
MMP2P08253 RN7SKP83-201ENST00000516512 178 ntBASIC3.72□□□□□ -1.81
MMP2P08253 RN7SKP244-201ENST00000516513 307 ntBASIC3.72□□□□□ -1.81
MMP2P08253 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.72□□□□□ -1.81
MMP2P08253 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.72□□□□□ -1.81
MMP2P08253 AC012213.3-201ENST00000577199 777 ntBASIC3.72□□□□□ -1.81
MMP2P08253 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms