Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 RNA5SP498-201ENST00000411342 120 ntBASIC1.56□□□□□ -2.16
TRAV1-2A0A0B4J238 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.56□□□□□ -2.16
TRAV1-2A0A0B4J238 AL451062.2-201ENST00000427515 271 ntBASIC1.56□□□□□ -2.16
TRAV1-2A0A0B4J238 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC1.56□□□□□ -2.16
TRAV1-2A0A0B4J238 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.56□□□□□ -2.16
TRAV1-2A0A0B4J238 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC1.56□□□□□ -2.16
TRAV1-2A0A0B4J238 RABEPKP1-201ENST00000440529 1026 ntBASIC1.56□□□□□ -2.16
TRAV1-2A0A0B4J238 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC1.56□□□□□ -2.16
TRAV1-2A0A0B4J238 RPS29P12-201ENST00000460178 152 ntBASIC1.56□□□□□ -2.16
TRAV1-2A0A0B4J238 HSPE1P6-201ENST00000479457 291 ntBASIC1.56□□□□□ -2.16
TRAV1-2A0A0B4J238 DSTNP2-201ENST00000504533 515 ntBASIC1.56□□□□□ -2.16
TRAV1-2A0A0B4J238 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC1.56□□□□□ -2.16
TRAV1-2A0A0B4J238 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC1.56□□□□□ -2.16
TRAV1-2A0A0B4J238 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
TRAV1-2A0A0B4J238 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.56□□□□□ -2.16
TRAV1-2A0A0B4J238 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.56□□□□□ -2.16
TRAV1-2A0A0B4J238 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.56□□□□□ -2.16
TRAV1-2A0A0B4J238 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC1.56□□□□□ -2.16
TRAV1-2A0A0B4J238 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.56□□□□□ -2.16
TRAV1-2A0A0B4J238 MIR1273D-201ENST00000577266 86 ntBASIC1.56□□□□□ -2.16
TRAV1-2A0A0B4J238 AC090897.2-201ENST00000581715 130 ntBASIC1.56□□□□□ -2.16
TRAV1-2A0A0B4J238 AC020895.1-201ENST00000595362 272 ntBASIC1.56□□□□□ -2.16
TRAV1-2A0A0B4J238 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC1.56□□□□□ -2.16
TRAV1-2A0A0B4J238 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.56□□□□□ -2.16
TRAV1-2A0A0B4J238 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
TRAV1-2A0A0B4J238 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.56□□□□□ -2.16
TRAV1-2A0A0B4J238 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC1.55□□□□□ -2.16
TRAV1-2A0A0B4J238 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
TRAV1-2A0A0B4J238 RNU6-50P-201ENST00000362356 103 ntBASIC1.55□□□□□ -2.16
TRAV1-2A0A0B4J238 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.55□□□□□ -2.16
TRAV1-2A0A0B4J238 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC1.55□□□□□ -2.16
TRAV1-2A0A0B4J238 AC092017.2-201ENST00000427600 362 ntBASIC1.55□□□□□ -2.16
TRAV1-2A0A0B4J238 OR51AB1P-201ENST00000429046 620 ntBASIC1.55□□□□□ -2.16
TRAV1-2A0A0B4J238 SNRPEP4-201ENST00000435815 279 ntBASIC1.55□□□□□ -2.16
TRAV1-2A0A0B4J238 USP9YP15-201ENST00000442391 422 ntBASIC1.55□□□□□ -2.16
TRAV1-2A0A0B4J238 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC1.55□□□□□ -2.16
TRAV1-2A0A0B4J238 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC1.55□□□□□ -2.16
TRAV1-2A0A0B4J238 HMGB1P15-201ENST00000453854 435 ntBASIC1.55□□□□□ -2.16
TRAV1-2A0A0B4J238 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
TRAV1-2A0A0B4J238 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.55□□□□□ -2.16
TRAV1-2A0A0B4J238 GAPDHP39-201ENST00000481866 979 ntBASIC1.55□□□□□ -2.16
TRAV1-2A0A0B4J238 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC1.55□□□□□ -2.16
TRAV1-2A0A0B4J238 AC111000.5-201ENST00000506559 1178 ntBASIC1.55□□□□□ -2.16
TRAV1-2A0A0B4J238 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC1.55□□□□□ -2.16
TRAV1-2A0A0B4J238 RNU6-319P-201ENST00000516025 108 ntBASIC1.55□□□□□ -2.16
TRAV1-2A0A0B4J238 AP004371.1-201ENST00000525240 214 ntBASIC1.55□□□□□ -2.16
TRAV1-2A0A0B4J238 AC019227.1-201ENST00000526902 510 ntBASIC1.55□□□□□ -2.16
TRAV1-2A0A0B4J238 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.55□□□□□ -2.16
TRAV1-2A0A0B4J238 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.55□□□□□ -2.16
TRAV1-2A0A0B4J238 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC1.55□□□□□ -2.16
TRAV1-2A0A0B4J238 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.55□□□□□ -2.16
TRAV1-2A0A0B4J238 MTCO2P22-201ENST00000603246 681 ntBASIC1.55□□□□□ -2.16
TRAV1-2A0A0B4J238 AC008962.1-201ENST00000605729 304 ntBASIC1.55□□□□□ -2.16
TRAV1-2A0A0B4J238 AC009090.3-201ENST00000616553 565 ntBASIC1.55□□□□□ -2.16
TRAV1-2A0A0B4J238 AL136360.1-201ENST00000503377 1900 ntBASIC1.55□□□□□ -2.16
TRAV1-2A0A0B4J238 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
TRAV1-2A0A0B4J238 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.55□□□□□ -2.16
TRAV1-2A0A0B4J238 RNU6-1027P-201ENST00000383998 107 ntBASIC1.54□□□□□ -2.16
TRAV1-2A0A0B4J238 AL135786.1-201ENST00000415892 214 ntBASIC1.54□□□□□ -2.16
TRAV1-2A0A0B4J238 NUP35P2-201ENST00000416748 943 ntBASIC1.54□□□□□ -2.16
TRAV1-2A0A0B4J238 RNF19BPX-201ENST00000426224 625 ntBASIC1.54□□□□□ -2.16
TRAV1-2A0A0B4J238 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC1.54□□□□□ -2.16
TRAV1-2A0A0B4J238 MED6P1-201ENST00000439659 713 ntBASIC1.54□□□□□ -2.16
TRAV1-2A0A0B4J238 Z77249.1-201ENST00000444622 1175 ntBASIC1.54□□□□□ -2.16
TRAV1-2A0A0B4J238 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.54□□□□□ -2.16
TRAV1-2A0A0B4J238 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
TRAV1-2A0A0B4J238 RPL31P20-201ENST00000449593 360 ntBASIC1.54□□□□□ -2.16
TRAV1-2A0A0B4J238 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC1.54□□□□□ -2.16
TRAV1-2A0A0B4J238 AL035407.2-201ENST00000454090 378 ntBASIC1.54□□□□□ -2.16
TRAV1-2A0A0B4J238 RPL5P13-201ENST00000462840 709 ntBASIC1.54□□□□□ -2.16
TRAV1-2A0A0B4J238 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.54□□□□□ -2.16
TRAV1-2A0A0B4J238 AC106872.3-201ENST00000495104 446 ntBASIC1.54□□□□□ -2.16
TRAV1-2A0A0B4J238 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC1.54□□□□□ -2.16
TRAV1-2A0A0B4J238 RN7SKP283-201ENST00000517197 270 ntBASIC1.54□□□□□ -2.16
TRAV1-2A0A0B4J238 AC087373.1-201ENST00000524920 491 ntBASIC1.54□□□□□ -2.16
TRAV1-2A0A0B4J238 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.54□□□□□ -2.16
TRAV1-2A0A0B4J238 AC009220.3-201ENST00000604318 586 ntBASIC1.54□□□□□ -2.16
TRAV1-2A0A0B4J238 AC008083.4-201ENST00000615076 444 ntBASIC1.54□□□□□ -2.16
TRAV1-2A0A0B4J238 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC1.54□□□□□ -2.16
TRAV1-2A0A0B4J238 AC007275.1-201ENST00000621243 671 ntBASIC1.54□□□□□ -2.16
TRAV1-2A0A0B4J238 AC103798.2-201ENST00000624292 632 ntBASIC1.54□□□□□ -2.16
TRAV1-2A0A0B4J238 AC024023.1-201ENST00000624530 922 ntBASIC1.54□□□□□ -2.16
TRAV1-2A0A0B4J238 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC1.54□□□□□ -2.16
TRAV1-2A0A0B4J238 AL354685.2-201ENST00000448218 1447 ntBASIC1.54□□□□□ -2.16
TRAV1-2A0A0B4J238 AC135776.4-201ENST00000624300 1904 ntBASIC1.54□□□□□ -2.16
TRAV1-2A0A0B4J238 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
TRAV1-2A0A0B4J238 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC1.54□□□□□ -2.16
TRAV1-2A0A0B4J238 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
TRAV1-2A0A0B4J238 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
TRAV1-2A0A0B4J238 HMGB1P5-201ENST00000255320 642 ntBASIC1.53□□□□□ -2.16
TRAV1-2A0A0B4J238 RNU6-461P-201ENST00000364195 107 ntBASIC1.53□□□□□ -2.16
TRAV1-2A0A0B4J238 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
TRAV1-2A0A0B4J238 RNU6-1181P-201ENST00000384191 106 ntBASIC1.53□□□□□ -2.16
TRAV1-2A0A0B4J238 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.53□□□□□ -2.16
TRAV1-2A0A0B4J238 CYCSP45-201ENST00000402289 315 ntBASIC1.53□□□□□ -2.16
TRAV1-2A0A0B4J238 RNA5SP38-201ENST00000410750 119 ntBASIC1.53□□□□□ -2.16
TRAV1-2A0A0B4J238 ZNF90P2-204ENST00000419323 1075 ntBASIC1.53□□□□□ -2.16
TRAV1-2A0A0B4J238 AL606495.1-201ENST00000422100 813 ntBASIC1.53□□□□□ -2.16
TRAV1-2A0A0B4J238 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC1.53□□□□□ -2.16
TRAV1-2A0A0B4J238 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms