Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC22.95■■□□□ 1.26
DDX49Q9Y6V7 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC22.95■■□□□ 1.26
DDX49Q9Y6V7 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
DDX49Q9Y6V7 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
DDX49Q9Y6V7 AR-207ENST00000612010 3896 ntTSL 5 BASIC22.95■■□□□ 1.26
DDX49Q9Y6V7 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
DDX49Q9Y6V7 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC22.94■■□□□ 1.26
DDX49Q9Y6V7 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
DDX49Q9Y6V7 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
DDX49Q9Y6V7 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
DDX49Q9Y6V7 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC22.94■■□□□ 1.26
DDX49Q9Y6V7 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
DDX49Q9Y6V7 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
DDX49Q9Y6V7 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC22.94■■□□□ 1.26
DDX49Q9Y6V7 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC22.94■■□□□ 1.26
DDX49Q9Y6V7 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC22.94■■□□□ 1.26
DDX49Q9Y6V7 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
DDX49Q9Y6V7 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
DDX49Q9Y6V7 AC009237.14-201ENST00000609975 1594 ntBASIC22.94■■□□□ 1.26
DDX49Q9Y6V7 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
DDX49Q9Y6V7 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
DDX49Q9Y6V7 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC22.94■■□□□ 1.26
DDX49Q9Y6V7 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
DDX49Q9Y6V7 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC22.94■■□□□ 1.26
DDX49Q9Y6V7 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
DDX49Q9Y6V7 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
DDX49Q9Y6V7 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
DDX49Q9Y6V7 AL390719.1-204ENST00000412397 1219 ntBASIC22.94■■□□□ 1.26
DDX49Q9Y6V7 AC133681.1-201ENST00000465482 601 ntBASIC22.94■■□□□ 1.26
DDX49Q9Y6V7 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
DDX49Q9Y6V7 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC22.94■■□□□ 1.26
DDX49Q9Y6V7 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
DDX49Q9Y6V7 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC22.94■■□□□ 1.26
DDX49Q9Y6V7 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
DDX49Q9Y6V7 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
DDX49Q9Y6V7 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
DDX49Q9Y6V7 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC22.93■■□□□ 1.26
DDX49Q9Y6V7 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC22.93■■□□□ 1.26
DDX49Q9Y6V7 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
DDX49Q9Y6V7 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
DDX49Q9Y6V7 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
DDX49Q9Y6V7 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
DDX49Q9Y6V7 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
DDX49Q9Y6V7 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
DDX49Q9Y6V7 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
DDX49Q9Y6V7 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC22.93■■□□□ 1.26
DDX49Q9Y6V7 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
DDX49Q9Y6V7 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
DDX49Q9Y6V7 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
DDX49Q9Y6V7 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
DDX49Q9Y6V7 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
DDX49Q9Y6V7 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
DDX49Q9Y6V7 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
DDX49Q9Y6V7 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC22.93■■□□□ 1.26
DDX49Q9Y6V7 AC233702.5-201ENST00000584107 538 ntBASIC22.93■■□□□ 1.26
DDX49Q9Y6V7 Six3os1_6.1-201ENST00000620790 196 ntBASIC22.93■■□□□ 1.26
DDX49Q9Y6V7 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC22.93■■□□□ 1.26
DDX49Q9Y6V7 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
DDX49Q9Y6V7 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
DDX49Q9Y6V7 AL049812.1-201ENST00000432563 2267 ntBASIC22.93■■□□□ 1.26
DDX49Q9Y6V7 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC22.93■■□□□ 1.26
DDX49Q9Y6V7 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
DDX49Q9Y6V7 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
DDX49Q9Y6V7 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
DDX49Q9Y6V7 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
DDX49Q9Y6V7 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC22.92■■□□□ 1.26
DDX49Q9Y6V7 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
DDX49Q9Y6V7 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC22.92■■□□□ 1.26
DDX49Q9Y6V7 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
DDX49Q9Y6V7 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
DDX49Q9Y6V7 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC22.92■■□□□ 1.26
DDX49Q9Y6V7 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC22.92■■□□□ 1.26
DDX49Q9Y6V7 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC22.92■■□□□ 1.26
DDX49Q9Y6V7 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC22.92■■□□□ 1.26
DDX49Q9Y6V7 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC22.92■■□□□ 1.26
DDX49Q9Y6V7 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC22.92■■□□□ 1.26
DDX49Q9Y6V7 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC22.92■■□□□ 1.26
DDX49Q9Y6V7 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC22.92■■□□□ 1.26
DDX49Q9Y6V7 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC22.92■■□□□ 1.26
DDX49Q9Y6V7 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC22.92■■□□□ 1.26
DDX49Q9Y6V7 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
DDX49Q9Y6V7 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
DDX49Q9Y6V7 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC22.92■■□□□ 1.26
DDX49Q9Y6V7 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
DDX49Q9Y6V7 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
DDX49Q9Y6V7 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
DDX49Q9Y6V7 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
DDX49Q9Y6V7 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
DDX49Q9Y6V7 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC22.91■■□□□ 1.26
DDX49Q9Y6V7 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
DDX49Q9Y6V7 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC22.91■■□□□ 1.26
DDX49Q9Y6V7 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
DDX49Q9Y6V7 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
DDX49Q9Y6V7 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
DDX49Q9Y6V7 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC22.91■■□□□ 1.26
DDX49Q9Y6V7 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC22.91■■□□□ 1.26
DDX49Q9Y6V7 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC22.91■■□□□ 1.26
DDX49Q9Y6V7 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC22.91■■□□□ 1.26
DDX49Q9Y6V7 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC22.91■■□□□ 1.26
DDX49Q9Y6V7 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms