Protein–RNA interactions for Protein: Q9Y679

AUP1, Ancient ubiquitous protein 1, humanhuman

Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AUP1Q9Y679 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
AUP1Q9Y679 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
AUP1Q9Y679 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
AUP1Q9Y679 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
AUP1Q9Y679 MIR718-201ENST00000390190 70 ntBASIC16.59■□□□□ 0.25
AUP1Q9Y679 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
AUP1Q9Y679 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.59■□□□□ 0.25
AUP1Q9Y679 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC16.59■□□□□ 0.25
AUP1Q9Y679 AC008550.1-201ENST00000511500 884 ntBASIC16.59■□□□□ 0.25
AUP1Q9Y679 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.59■□□□□ 0.25
AUP1Q9Y679 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC16.59■□□□□ 0.25
AUP1Q9Y679 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.59■□□□□ 0.25
AUP1Q9Y679 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
AUP1Q9Y679 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC16.59■□□□□ 0.25
AUP1Q9Y679 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC16.59■□□□□ 0.25
AUP1Q9Y679 AC120498.8-201ENST00000614275 531 ntBASIC16.59■□□□□ 0.25
AUP1Q9Y679 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
AUP1Q9Y679 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.59■□□□□ 0.25
AUP1Q9Y679 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
AUP1Q9Y679 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
AUP1Q9Y679 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
AUP1Q9Y679 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.59■□□□□ 0.25
AUP1Q9Y679 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC16.59■□□□□ 0.25
AUP1Q9Y679 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
AUP1Q9Y679 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
AUP1Q9Y679 MOK-233ENST00000524214 1539 ntTSL 2 BASIC16.59■□□□□ 0.25
AUP1Q9Y679 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
AUP1Q9Y679 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC16.59■□□□□ 0.25
AUP1Q9Y679 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
AUP1Q9Y679 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
AUP1Q9Y679 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
AUP1Q9Y679 STK25-205ENST00000405883 1904 ntTSL 2 BASIC16.58■□□□□ 0.25
AUP1Q9Y679 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
AUP1Q9Y679 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.25
AUP1Q9Y679 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
AUP1Q9Y679 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
AUP1Q9Y679 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
AUP1Q9Y679 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
AUP1Q9Y679 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
AUP1Q9Y679 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
AUP1Q9Y679 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
AUP1Q9Y679 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.58■□□□□ 0.24
AUP1Q9Y679 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC16.58■□□□□ 0.24
AUP1Q9Y679 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC16.58■□□□□ 0.24
AUP1Q9Y679 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
AUP1Q9Y679 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
AUP1Q9Y679 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC16.58■□□□□ 0.24
AUP1Q9Y679 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.58■□□□□ 0.24
AUP1Q9Y679 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.58■□□□□ 0.24
AUP1Q9Y679 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
AUP1Q9Y679 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
AUP1Q9Y679 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
AUP1Q9Y679 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC16.58■□□□□ 0.24
AUP1Q9Y679 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC16.58■□□□□ 0.24
AUP1Q9Y679 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
AUP1Q9Y679 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
AUP1Q9Y679 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
AUP1Q9Y679 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
AUP1Q9Y679 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.58■□□□□ 0.24
AUP1Q9Y679 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
AUP1Q9Y679 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
AUP1Q9Y679 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
AUP1Q9Y679 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
AUP1Q9Y679 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
AUP1Q9Y679 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
AUP1Q9Y679 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.58■□□□□ 0.24
AUP1Q9Y679 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
AUP1Q9Y679 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.58■□□□□ 0.24
AUP1Q9Y679 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AUP1Q9Y679 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.57■□□□□ 0.24
AUP1Q9Y679 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
AUP1Q9Y679 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AUP1Q9Y679 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC16.57■□□□□ 0.24
AUP1Q9Y679 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.57■□□□□ 0.24
AUP1Q9Y679 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.57■□□□□ 0.24
AUP1Q9Y679 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
AUP1Q9Y679 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AUP1Q9Y679 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
AUP1Q9Y679 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AUP1Q9Y679 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
AUP1Q9Y679 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
AUP1Q9Y679 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
AUP1Q9Y679 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
AUP1Q9Y679 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.57■□□□□ 0.24
AUP1Q9Y679 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AUP1Q9Y679 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
AUP1Q9Y679 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
AUP1Q9Y679 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AUP1Q9Y679 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC16.57■□□□□ 0.24
AUP1Q9Y679 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.57■□□□□ 0.24
AUP1Q9Y679 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC16.57■□□□□ 0.24
AUP1Q9Y679 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.57■□□□□ 0.24
AUP1Q9Y679 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC16.57■□□□□ 0.24
AUP1Q9Y679 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AUP1Q9Y679 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
AUP1Q9Y679 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
AUP1Q9Y679 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC16.57■□□□□ 0.24
AUP1Q9Y679 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.57■□□□□ 0.24
AUP1Q9Y679 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
AUP1Q9Y679 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms