Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC21.01■□□□□ 0.95
SCN10AQ9Y5Y9 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCN10AQ9Y5Y9 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCN10AQ9Y5Y9 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC21.01■□□□□ 0.95
SCN10AQ9Y5Y9 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC21.01■□□□□ 0.95
SCN10AQ9Y5Y9 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
SCN10AQ9Y5Y9 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SCN10AQ9Y5Y9 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCN10AQ9Y5Y9 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SCN10AQ9Y5Y9 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCN10AQ9Y5Y9 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
SCN10AQ9Y5Y9 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCN10AQ9Y5Y9 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC21■□□□□ 0.95
SCN10AQ9Y5Y9 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21■□□□□ 0.95
SCN10AQ9Y5Y9 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21■□□□□ 0.95
SCN10AQ9Y5Y9 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC21■□□□□ 0.95
SCN10AQ9Y5Y9 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC21■□□□□ 0.95
SCN10AQ9Y5Y9 MIR3180-5-201ENST00000583743 153 ntBASIC21■□□□□ 0.95
SCN10AQ9Y5Y9 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SCN10AQ9Y5Y9 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SCN10AQ9Y5Y9 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SCN10AQ9Y5Y9 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC21■□□□□ 0.95
SCN10AQ9Y5Y9 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SCN10AQ9Y5Y9 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SCN10AQ9Y5Y9 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC21■□□□□ 0.95
SCN10AQ9Y5Y9 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SCN10AQ9Y5Y9 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
SCN10AQ9Y5Y9 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SCN10AQ9Y5Y9 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCN10AQ9Y5Y9 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
SCN10AQ9Y5Y9 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
SCN10AQ9Y5Y9 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.99■□□□□ 0.95
SCN10AQ9Y5Y9 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SCN10AQ9Y5Y9 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCN10AQ9Y5Y9 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SCN10AQ9Y5Y9 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.99■□□□□ 0.95
SCN10AQ9Y5Y9 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.99■□□□□ 0.95
SCN10AQ9Y5Y9 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.99■□□□□ 0.95
SCN10AQ9Y5Y9 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.99■□□□□ 0.95
SCN10AQ9Y5Y9 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC20.99■□□□□ 0.95
SCN10AQ9Y5Y9 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.99■□□□□ 0.95
SCN10AQ9Y5Y9 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCN10AQ9Y5Y9 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCN10AQ9Y5Y9 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCN10AQ9Y5Y9 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
SCN10AQ9Y5Y9 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SCN10AQ9Y5Y9 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCN10AQ9Y5Y9 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.99■□□□□ 0.95
SCN10AQ9Y5Y9 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCN10AQ9Y5Y9 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCN10AQ9Y5Y9 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC20.99■□□□□ 0.95
SCN10AQ9Y5Y9 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SCN10AQ9Y5Y9 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC20.99■□□□□ 0.95
SCN10AQ9Y5Y9 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.99■□□□□ 0.95
SCN10AQ9Y5Y9 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC20.99■□□□□ 0.95
SCN10AQ9Y5Y9 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCN10AQ9Y5Y9 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20.99■□□□□ 0.95
SCN10AQ9Y5Y9 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC20.99■□□□□ 0.95
SCN10AQ9Y5Y9 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.99■□□□□ 0.95
SCN10AQ9Y5Y9 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCN10AQ9Y5Y9 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCN10AQ9Y5Y9 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SCN10AQ9Y5Y9 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCN10AQ9Y5Y9 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.98■□□□□ 0.95
SCN10AQ9Y5Y9 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCN10AQ9Y5Y9 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCN10AQ9Y5Y9 AL023284.2-201ENST00000405850 579 ntBASIC20.98■□□□□ 0.95
SCN10AQ9Y5Y9 AC026396.1-201ENST00000419388 421 ntBASIC20.98■□□□□ 0.95
SCN10AQ9Y5Y9 AP002383.4-201ENST00000442518 975 ntBASIC20.98■□□□□ 0.95
SCN10AQ9Y5Y9 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC20.98■□□□□ 0.95
SCN10AQ9Y5Y9 IRF5-214ENST00000613821 595 ntTSL 5 BASIC20.98■□□□□ 0.95
SCN10AQ9Y5Y9 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC20.98■□□□□ 0.95
SCN10AQ9Y5Y9 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCN10AQ9Y5Y9 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCN10AQ9Y5Y9 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.98■□□□□ 0.95
SCN10AQ9Y5Y9 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
SCN10AQ9Y5Y9 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.98■□□□□ 0.95
SCN10AQ9Y5Y9 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCN10AQ9Y5Y9 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SCN10AQ9Y5Y9 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC20.97■□□□□ 0.95
SCN10AQ9Y5Y9 AL121672.3-201ENST00000608644 468 ntBASIC20.97■□□□□ 0.95
SCN10AQ9Y5Y9 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC20.97■□□□□ 0.95
SCN10AQ9Y5Y9 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCN10AQ9Y5Y9 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCN10AQ9Y5Y9 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SCN10AQ9Y5Y9 AC016734.2-201ENST00000624325 1377 ntBASIC20.97■□□□□ 0.95
SCN10AQ9Y5Y9 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCN10AQ9Y5Y9 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC20.97■□□□□ 0.95
SCN10AQ9Y5Y9 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
SCN10AQ9Y5Y9 AC111152.3-201ENST00000569699 673 ntBASIC20.97■□□□□ 0.95
SCN10AQ9Y5Y9 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.97■□□□□ 0.95
SCN10AQ9Y5Y9 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCN10AQ9Y5Y9 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.97■□□□□ 0.95
SCN10AQ9Y5Y9 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCN10AQ9Y5Y9 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCN10AQ9Y5Y9 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCN10AQ9Y5Y9 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.96■□□□□ 0.95
SCN10AQ9Y5Y9 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SCN10AQ9Y5Y9 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCN10AQ9Y5Y9 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms